Best practices and software for themanagement and sharing of camera trap data for small and large scales studies

Camera traps typically generate large amounts of bycatch data of non-target species that are secondary to the study’s objectives. Bycatch data pooled from multiple studies can answer secondary research questions; however, variation in field and data management techniques creates problems when pooling data from multiple sources. Multi-collaborator projects that use standardized methods to answer broad-scale research questions are rare and limited in geographical scope. Many small, fixed-term independent camera trap studies operate in poorly represented regions, often using field and data management methods tailored to their own objectives. Inconsistent data management practices lead to loss of bycatch data, or an inability to share it easily. As a case study to illustrate common problems that limit use of bycatch data, we discuss our experiences processing bycatch data obtained by multiple research groups during a range-wide assessment of sun bears Helarctos malayanus in Southeast Asia. We found that the most significant barrier to using bycatch data for secondary research was the time required, by the owners of the data and by the secondary researchers (us), to retrieve, interpret and process data into a form suitable for secondary analyses. Furthermore, large quantities of data were lost due to incompleteness and ambiguities in data entry. From our experiences, and from a review of the published literature and online resources, we generated nine recommendations on data management best practices for field site metadata, camera trap deployment metadata, image classification data and derived data products. We cover simple techniques that can be employed without training, special software and Internet access, as well as options for more advanced users, including a review of data management software and platforms. From the range of solutions provided here, researchers can employ those that best suit their needs and capacity. Doing so will enhance the usefulness of their camera trap bycatch data by improving the ease of data sharing, enabling collaborations and expanding the scope of research

Population Status of a Cryptic Top Predator: An Island-Wide Assessment of Tigers in Sumatran Rainforests

Large carnivores living in tropical rainforests are under immense pressure from the rapid conversion of their habitat. In response, millions of dollars are spent on conserving these species. However, the cost-effectiveness of such investments is poorly understood and this is largely because the requisite population estimates are difficult to achieve at appropriate spatial scales for these secretive species. Here, we apply a robust detection/non-detection sampling technique to produce the first reliable population metric (occupancy) for a critically endangered large carnivore; the Sumatran tiger (Panthera tigris sumatrae). From 2007–2009, seven landscapes were surveyed through 13,511 km of transects in 394 grid cells (17×17 km). Tiger sign was detected in 206 cells, producing a naive estimate of 0.52. However, after controlling for an unequal detection probability (where p = 0.13±0.017; ±S.E.), the estimated tiger occupancy was 0.72±0.048. Whilst the Sumatra-wide survey results gives cause for optimism, a significant negative correlation between occupancy and recent deforestation was found. For example, the Northern Riau landscape had an average deforestation rate of 9.8%/yr and by far the lowest occupancy (0.33±0.055). Our results highlight the key tiger areas in need of protection and have led to one area (Leuser-Ulu Masen) being upgraded as a ‘global priority’ for wild tiger conservation. However, Sumatra has one of the highest global deforestation rates and the two largest tiger landscapes identified in this study will become highly fragmented if their respective proposed roads networks are approved. Thus, it is vital that the Indonesian government tackles these threats, e.g. through improved land-use planning, if it is to succeed in meeting its ambitious National Tiger Recovery Plan targets of doubling the number of Sumatran tigers by 2022

CamTrapAsia: A dataset of tropical forest vertebrate communities from 239 camera trapping studies

Information on tropical Asian vertebrates has traditionally been sparse, particularly when it comes to cryptic species inhabiting the dense forests of the region. Vertebrate populations are declining globally due to land‐use change and hunting, the latter frequently referred as “defaunation.” This is especially true in tropical Asia where there is extensive land‐use change and high human densities. Robust monitoring requires that large volumes of vertebrate population data be made available for use by the scientific and applied communities. Camera traps have emerged as an effective, non‐invasive, widespread, and common approach to surveying vertebrates in their natural habitats. However, camera‐derived datasets remain scattered across a wide array of sources, including published scientific literature, gray literature, and unpublished works, making it challenging for researchers to harness the full potential of cameras for ecology, conservation, and management. In response, we collated and standardized observations from 239 camera trap studies conducted in tropical Asia. There were 278,260 independent records of 371 distinct species, comprising 232 mammals, 132 birds, and seven reptiles. The total trapping effort accumulated in this data paper consisted of 876,606 trap nights, distributed among Indonesia, Singapore, Malaysia, Bhutan, Thailand, Myanmar, Cambodia, Laos, Vietnam, Nepal, and far eastern India. The relatively standardized deployment methods in the region provide a consistent, reliable, and rich count data set relative to other large‐scale pressence‐only data sets, such as the Global Biodiversity Information Facility (GBIF) or citizen science repositories (e.g., iNaturalist), and is thus most similar to eBird. To facilitate the use of these data, we also provide mammalian species trait information and 13 environmental covariates calculated at three spatial scales around the camera survey centroids (within 10‐, 20‐, and 30‐km buffers). We will update the dataset to include broader coverage of temperate Asia and add newer surveys and covariates as they become available. This dataset unlocks immense opportunities for single‐species ecological or conservation studies as well as applied ecology, community ecology, and macroecology investigations. The data are fully available to the public for utilization and research. Please cite this data paper when utilizing the data

The existence of Sumatran tiger (Panthera tigris sumatrae Pocock, 1929) and their prey in different forest habitat types in Kerinci Seblat National Park, Sumatra

A study on the relationships between prey animals and the occurence of sumatran tiger was conducted in Kerinci Seblat National Park, western Sumatra from May up to September 2001. The data have been collected from eight study sites based on the forest habitat types and its threats. The results showed that frequency of encounters with prey animals in different forest habitats were no difference. This might indicates that the prey animals were distributed fairly in all types of forest habitat. The frequency encounters of the sumatran tiger signs, however, have shown differently between locations. The encounters of tiger signs were more frequent in the forest habitats that close to the streams; in forest habitats with few animal huntings; and in forest habitats with no logging activities. This findings support the hypotheses that the existence of sumatran tiger as a predator is determined by the dense vegetations surrounding streams as hiding place used in an ambush; availability of prey animals as food, and habitat disturbances as shown by logging

Estimating occupancy of a data deficient mammalian species living in tropical rainforests: Sun bears in the Kerinci Seblat region, Sumatra

Tropical mammals represent some of the most threatened species, but also the least known because they tend to be difficult to study. To objectively evaluate the conservation status of these species, standardized methods are urgently required. The sun bear Helarctos malayanus is a case in point: it is cryptic, difficult to detect and consequently classified on the IUCN Red List as Data Deficient, and the highest priority for bear conservation research. In this study, we apply a detection/non-detection sampling technique using camera trap data with environmental covariates to estimate sun bear occupancy from three tropical forest study areas with different levels of degradation and protection status in Sumatra. Sun bear detections, and encounter rates, were highest in one of the primary forest study areas, but sun bear occupancy was highest in the degraded forest study area. Whilst, sun bears were recorded at a greater proportion of camera placements in degraded forest, these records were often on only one occasion at each placement, which greatly increased the final occupancy estimate. Primary forests with their large fruiting trees undoubtedly represent good sun bear habitat, but our results indicate that degraded forest can also represent important habitat. These forests should therefore not be considered as having limited conservation value and assigned to other uses, such as oil palm production, as has previously happened in Sumatra. Estimating occupancy between years will yield information on the population trends of sun bears and other tropical mammals, which can be used to provide more reliable conservation assessments

Conserving tigers Panthera tigris in selectively logged Sumatran forests

The response of most large carnivores to selective logging is poorly understood. On the one hand, selective logging may represent loss of important habitat, yet, on the other hand, selective logging may increase browse availability for a terrestrial ungulate prey base, thereby indirectly benefiting large carnivores. Using a camera trap-based sampling method, we estimate tiger density in two primary-selectively logged forest areas that straddle Kerinci Seblat National Park, Sumatra. We then investigate potential differences between the habitat use of tigers: within these study areas and forest types; and, within the finer-scale landscape features associated with these covariates. Across the mixed forest study areas, tiger density estimates (adult individuals/100 km(2) +/- S.E.) of 2.95 +/- 0.56 and 1.55 +/- 0.34 were produced. However, within these areas, tigers showed a preference for primary over degraded forest, and this was related to the greater accessibility of degraded forest sites to people, e.g., through their proximity to roads. Presently, the majority of Sumatran tigers occur within large tracts of primary forest, but these extend outside of the island's protected area borders, and these unprotected forests are especially at risk from the high levels of deforestation in Sumatra. As forest is cleared, previously remote, and therefore safer, tracts of primary forest become accessible and, eventually, degraded. Yet, from our study, degraded forest in combination with primary forest supported sufficiently high tiger densities and can, therefore, make an important contribution to tiger conservation. It is therefore essential to lessen the detrimental effects of accessibility through increasing law enforcement and destroying ex-logging roads. Crown Copyrigh

Camera trapping rare and threatened avifauna in west-central Sumatra

Tropical forests are becoming increasingly degraded and fragmented by logging, which can affect the survival of forest bird species in different ways. In this study, we present avifauna data collected from a monitoring programme in west-central Sumatra that set camera traps in three study areas with different habitat types, levels of degradation and protection status. From 5,990 camera trap-nights, 248 independent bird photographs were recorded, comprising four orders and nine species, including three endemic species. The Great Argus Pheasant (Argusianus argus) was recorded in all study areas and most frequently (n = 202 photographs), followed by the threatened Salvadori's Pheasant (Lophura inornata). The greatest diversity of bird species (five) and abundance index (1.44 bird photographs/loo trap-nights) was recorded from a primary hillsubmontane forest site located inside Kerinci Seblat National Park (KSNP) bordering degraded forest in a former logging concession recently repatriated into KSNP. However, inside a primary-selectively logged hill-submontane forest site spread over KSNP and an ex-logging concession, a Sumatran Ground Cuckoo (Carpococcyx viridis) was photographed. This species is noteworthy because prior to this study it had only been documented once since 1916. It is therefore crucial to use the camera trap results to increase the protection status for the ground cuckoo area. This has already happened in the other two study areas, where camera trap data have been used to reclassify the areas as Core Zones, the highest level of protection inside KSNP. This study illustrates how routine monitoring can have wider benefits through recording, and conserving, threatened and endemic non-target species in unexpected habitats that might not otherwise have been surveyed

Knowledge, attitudes and practices of local people on Siberut Island (West-Sumatra, Indonesia) towards primate hunting and conservation

The Mentawai Archipelago (West-Sumatra, Indonesia) harbours a wealth of endemic animals and plants including six unique primate species, all threatened by habitat loss and hunting. Although hunting is known to be widespread, little systematic work has been carried out to examine its scale and impact on Mentawai´s primate populations. Here we report an island-wide survey carried out on Siberut, the archipelago’s largest island, to assess hunting behaviour with respect to the four locally-occurring primate species, as well as the attitudes of indigenous inhabitants to resource utilization. Face-to-face interviews were conducted in mid-2012 with 390 respondents from 50 villages using a structured questionnaire. Overall, ca. one quarter of the respondents (24%) are still active hunters, generally targeting Simias concolor (77%), Macaca siberu (71%) and Presbytis siberu (68%); Hylobates klossii is rarely hunted (3%). Mostly, a single animal is captured per hunt, with average numbers per three months ranging from 1.9-2.3 individuals (for S. concolor, M. siberu and P. siberu). We found that in many aspects our data did not differ between the protected area (Siberut National Park) and the rest of the island, although hunting was significantly more prevalent within the protected area’s boundaries. Our approximation of annual offtake leads us to conclude that no less than 4,800 primates are taken every year (min. 6.4 % of the population). We provide recommendations on how to reduce hunting as a driver for population decline.</a

Practise what you preach: a faith-based approach to conservation in Indonesia

Faith-based teachings on the environment have been identified as a potentially effective form of conservation outreach but one that remains largely untested. Indonesia contains 10% of the world's tropical rainforests and is the most populous Muslim country. A faith-based approach to conservation could therefore yield significant conservation benefits here. Within Islam several key principles in the Qur'an underpin and outline the role of humans in nature conservation. Here, we report on a Darwin Initiative project component that sought to assess the applicability of Islamic teachings to conservation action in West Sumatra. We developed water-conservation-themed sermons that were delivered by project-trained religious leaders in 10 mosques and nine Islamic boarding schools during the holy month of Ramadan. We conducted entry–exit questionnaire surveys to assess levels of concern, awareness and intent to act amongst male (n = 389) and female (n = 479) worshippers. The results revealed that greater attention should be paid to raising awareness of the linkages between Islam and conservation rather than on conservation principles alone, which were already adequately understood. This study provides the first insights into the important role that women could play within a faith-based project. Female respondents demonstrated greater knowledge and understanding of Islamic teachings about the environment and the services provided by watershed forests. They were also more likely to contribute to conservation activities, suggesting that future projects should seek to involve this often marginalized stakeholder group fully, as well as provide practical ways for men and women to transform words into action