Cyclic Delay-Doppler Shift: A Simple Transmit Diversity Technique for Delay-Doppler Waveforms in Doubly Selective Channels

Delay-Doppler waveform design has been considered as a promising solution to achieve reliable communication under high-mobility channels for the space-air-ground-integrated networks (SAGIN). In this paper, we introduce the cyclic delay-Doppler shift (CDDS) technique for delay-Doppler waveforms to extract transmit diversity in doubly selective channels. Two simple CDDS schemes, named time-domain CDDS (TD-CDDS) and modulation-domain CDDS (MD-CDDS), are proposed in the setting of multiple-input multiple-output (MIMO). We demonstrate the applications of CDDS on two representative delay-Doppler waveforms, namely orthogonal time frequency space (OTFS) and affine frequency division multiplexing (AFDM), by deriving their corresponding CDDS matrices. Furthermore, we prove theoretically and experimentally that CDDS can provide OTFS and AFDM with full transmit diversity gain on most occasions

Premixed jet flame characteristics of syngas using OH planar laser induced fluorescence

Lean premixed flame characteristics of several typical low calorific value (LCV) syngases (basis CO/H-2/CH4/CO2/N-2), including bituminous coal, wood residue, corn core, and wheat straw gasification syngas, were investigated using OH planar laser induced fluorescence (PLIF) technology. OH radical distributions within the turbulent flame were measured for different turbulence intensities. Flame structures of syngases were analyzed and characterized with respect to burnt and unburnt regions, flame curvature (sharp cusp), local extinction (holes and penetration), OH reaction layer thickness, wrinkling, and other features, with OH-PLIF instantaneous images and statistical analysis. Results show that H-2 content, LCV, and turbulence intensity are the most effective factors influencing the OH radical intensity and thickness of OH radical layers. The bituminous coal gasification syngas with relatively higher LCV and H-2 content tends to burn out easily. Through changes in thickness of the OH radical layers and signal intensities, the reaction layer can be compressed by intensifying turbulence and thereby the combustion processes of syngas

Gypenosides alleviate cone cell death in a zebrafish model of retinitis pigmentosa

Retinitis pigmentosa (RP) is a group of visual disorders caused by mutations in over 70 genes. RP is characterized by initial degeneration of rod cells and late cone cell death, regardless of genetic abnormality. Rod cells are the main consumers of oxygen in the retina, and after the death of rod cells, the cone cells have to endure high levels of oxygen, which in turn leads to oxidative damage and cone degeneration. Gypenosides (Gyp) are major dammarane-type saponins of Gynostemma pentaphyllum that are known to reduce oxidative stress and inflammation. In this project we assessed the protective effect of Gyp against cone cell death in the rpgrip1 mutant zebrafish, which recapitulate the classical pathological features found in RP patients. Rpgrip1 mutant zebrafish were treated with Gyp (50 µg/g body weight) from two-months post fertilization (mpf) until 6 mpf. Gyp treatment resulted in a significant decrease in cone cell death compared to that of untreated mutant zebrafish. A markedly low level of reactive oxygen species and increased expression of antioxidant genes were detected in Gyp-incubated mutant zebrafish eyes compared to that of untreated mutant zebrafish. Similarly, the activities of catalase and superoxide dismutase and the level of glutathione were significantly increased in Gyp-treated mutant zebrafish eyes compared to that of untreated mutant zebrafish. Gyp treatment also decreased endoplasmic reticulum stress in rpgrip1 mutant eyes. Expression of proinflammatory cytokines was also significantly decreased in Gyp-treated mutant zebrafish eyes compared to that of untreated mutant zebrafish. Network pharmacology analysis demonstrated that the promotion of cone cell survival by Gyp is possibly mediated by multiple hub genes and associated signalling pathways. These data suggest treatment with Gyp will benefit RP patients

Synthesis and Mechanism of Tetracalcium Phosphate from Nanocrystalline Precursor

Tetracalcium phosphate (TTCP, Ca4(PO4)2O) was prepared by the calcination of coprecipitated mixture of nanoscale hydroxyapatite (HA, Ca10(PO4)6(OH)2) and calcium carbonate crystal (CaCO3), followed by cooling in the air or furnace. The effect of calcination temperature on crystal structure and phase composition of the coprecipitation mixture was characterized by transmission electron microscope (TEM), thermal analysis-thermogravimetry (DTA-TG), X-ray diffraction (XRD), Fourier transform-infrared spectroscopy (FT-IR), and Raman spectroscopy (RS). The obtained results indicated that the synthesized mixture consisted of nanoscale HA and CaCO3 with uniform distribution throughout the composite. TTCP was observed in the air quenching samples when the calcination temperature was above 1185°C. With the increase of the calcination temperature, the amount of the intermediate products in the air quenching samples decreased and cannot be detected when calcination temperature reached 1450°C. Unexpectedly, the mixture of HA and calcium oxide was observed in the furnace cooling samples. Clearly, the calcination temperature and cooling methods are critical for the synthesis of high-purity TTCP. The results indicate that the nanosize of precursors can decrease the calcination temperature, and TTCP can be calcinated by low temperature

Chinese medicine, Qijudihuang pill, mediates cholesterol metabolism and regulates gut microbiota in high-fat diet-fed mice, implications for age related macular degeneration

Background: Traditional Chinese Medicines have been used for thousands of years but without any sound empirical basis. One such preparation is the Qijudihuang pill (QP), a mixture of eight herbs, that has been used in China for the treatment of various conditions including age-related macular degeneration (AMD), the most common cause of blindness in the aged population. In order to explain the mechanism behind the effect of QP, we used an AMD model of high-fat diet (HFD) fed mice to investigate cholesterol homeostasis, oxidative stress, inflammation and gut microbiota.Methods: Mice were randomly divided into three groups, one group was fed withcontrol diet (CD), the other two groups were fed with high-fat-diet (HFD). OneHFD group was treated with QP, both CD and the other HFD groups were treatedwith vehicles. Tissue samples were collected after the treatment. Cholesterollevels in retina, retinal pigment epithelium (RPE), liver and serum weredetermined using a commercial kit. The expression of enzymes involved incholesterol metabolism, inflammation and oxidative stress was measured withqRT-PCR. Gut microbiota was analyzed using 16S rRNA sequencing.Results: In the majority of the lipid determinations, analytes were elevated by HFD but thiswas reversed by QP. Cholesterol metabolism including the enzymes of bile acid (BA) formationwas suppressed by HFD but again thiswas reversed by QP. BAs play amajor role in signaling between host andmicrobiome and this is disrupted by HFD resulting in major changes in the composition of colonic bacterial communities. Associated with these changes are predictions of the metabolic pathway complexity and abundance of individual pathways. These concerned substrate breakdowns, energy production and the biosynthesis of proinflammatory factors but were changed back to control characteristics by QP.Conclusion: We propose that the ability of QP to reverse these HFD-inducedeffects is related to mechanisms acting to lower cholesterol level, oxidative stress and inflammation, and to modulate gut microbiota

Deep functional analysis of synII, a 770-kilobase synthetic yeast chromosome

INTRODUCTION Although much effort has been devoted to studying yeast in the past few decades, our understanding of this model organism is still limited. Rapidly developing DNA synthesis techniques have made a “build-to-understand” approach feasible to reengineer on the genome scale. Here, we report on the completion of a 770-kilobase synthetic yeast chromosome II (synII). SynII was characterized using extensive Trans-Omics tests. Despite considerable sequence alterations, synII is virtually indistinguishable from wild type. However, an up-regulation of translational machinery was observed and can be reversed by restoring the transfer RNA (tRNA) gene copy number. RATIONALE Following the “design-build-test-debug” working loop, synII was successfully designed and constructed in vivo. Extensive Trans-Omics tests were conducted, including phenomics, transcriptomics, proteomics, metabolomics, chromosome segregation, and replication analyses. By both complementation assays and SCRaMbLE (synthetic chromosome rearrangement and modification by loxP -mediated evolution), we targeted and debugged the origin of a growth defect at 37°C in glycerol medium. RESULTS To efficiently construct megabase-long chromosomes, we developed an I- Sce I–mediated strategy, which enables parallel integration of synthetic chromosome arms and reduced the overall integration time by 50% for synII. An I- Sce I site is introduced for generating a double-strand break to promote targeted homologous recombination during mitotic growth. Despite hundreds of modifications introduced, there are still regions sharing substantial sequence similarity that might lead to undesirable meiotic recombinations when intercrossing the two semisynthetic chromosome arm strains. Induction of the I- Sce I–mediated double-strand break is otherwise lethal and thus introduced a strong selective pressure for targeted homologous recombination. Since our strategy is designed to generate a markerless synII and leave the URA3 marker on the wild-type chromosome, we observed a tenfold increase in URA3 -deficient colonies upon I- Sce I induction, meaning that our strategy can greatly bias the crossover events toward the designated regions. By incorporating comprehensive phenotyping approaches at multiple levels, we demonstrated that synII was capable of powering the growth of yeast indistinguishably from wild-type cells (see the figure), showing highly consistent biological processes comparable to the native strain. Meanwhile, we also noticed modest but potentially significant up-regulation of the translational machinery. The main alteration underlying this change in expression is the deletion of 13 tRNA genes. A growth defect was observed in one very specific condition—high temperature (37°C) in medium with glycerol as a carbon source—where colony size was reduced significantly. We targeted and debugged this defect by two distinct approaches. The first approach involved phenotype screening of all intermediate strains followed by a complementation assay with wild-type sequences in the synthetic strain. By doing so, we identified a modification resulting from PCRTag recoding in TSC10 , which is involved in regulation of the yeast high-osmolarity glycerol (HOG) response pathway. After replacement with wild-type TSC10 , the defect was greatly mitigated. The other approach, debugging by SCRaMbLE, showed rearrangements in regions containing HOG regulation genes. Both approaches indicated that the defect is related to HOG response dysregulation. Thus, the phenotypic defect can be pinpointed and debugged through multiple alternative routes in the complex cellular interactome network. CONCLUSION We have demonstrated that synII segregates, replicates, and functions in a highly similar fashion compared with its wild-type counterpart. Furthermore, we believe that the iterative “design-build-test-debug” cycle methodology, established here, will facilitate progression of the Sc2.0 project in the face of the increasing synthetic genome complexity. SynII characterization. ( A ) Cell cycle comparison between synII and BY4741 revealed by the percentage of cells with separated CEN2-GFP dots, metaphase spindles, and anaphase spindles. ( B ) Replication profiling of synII (red) and BY4741 (black) expressed as relative copy number by deep sequencing. ( C ) RNA sequencing analysis revealed that the significant up-regulation of translational machinery in synII is induced by the deletion of tRNA genes in synII. </jats:sec