Saccharomyces arboricola and Its Hybrids’ Propensity for Sake Production: Interspecific Hybrids Reveal Increased Fermentation Abilities and a Mosaic Metabolic Profile

The use of interspecific hybrids during the industrial fermentation process has been well established, positioning the frontier of advancement in brewing to capitalize on the potential of Saccharomyces hybridization. Interspecific yeast hybrids used in modern monoculture inoculations benefit from a wide range of volatile metabolites that broaden the organoleptic complexity. This is the first report of sake brewing by Saccharomyces arboricola and its hybrids. S. arboricola x S. cerevisiae direct-mating generated cryotolerant interspecific hybrids which increased yields of ethanol and ethyl hexanoate compared to parental strains, important flavor attributes of fine Japanese ginjo sake rice wine. Hierarchical clustering heatmapping with principal component analysis for metabolic profiling was used in finding low levels of endogenous amino/organic acids clustered S. arboricola apart from the S. cerevisiae industrial strains. In sake fermentations, hybrid strains showed a mosaic profile of parental strains, while metabolic analysis suggested S. arboricola had a lower amino acid net uptake than S. cerevisiae. Additionally, this research found an increase in ethanolic fermentation from pyruvate and increased sulfur metabolism. Together, these results suggest S. arboricola is poised for in-depth metabolomic exploration in sake fermentation

Knots in a Spinor Bose-Einstein Condensate

We show that knots of spin textures can be created in the polar phase of a spin-1 Bose-Einstein condensate, and discuss experimental schemes for their generation and probe, together with their lifetime.Comment: 4 pages, 3 figure

Broadband Spectral Investigations of SGR J1550-5418 Bursts

We present the results of our broadband spectral analysis of 42 SGR J1550-5418 bursts simultaneously detected with the Swift/X-ray Telescope (XRT) and the Fermi/Gamma-ray Burst Monitor (GBM), during the 2009 January active episode of the source. The unique spectral and temporal capabilities of the XRT Windowed Timing mode have allowed us to extend the GBM spectral coverage for these events down to the X-ray domain (0.5-10 keV). Our earlier analysis of the GBM data found that the SGR J1550-5418 burst spectra were described equally well with a Comptonized model or with two blackbody functions; the two models were statistically indistinguishable. Our new broadband (0.5 - 200 keV) spectral fits show that, on average, the burst spectra are better described with two blackbody functions than with the Comptonized model. Thus, our joint XRT/GBM analysis clearly shows for the first time that the SGR J1550-5418 burst spectra might naturally be expected to exhibit a more truly thermalized character, such as a two-blackbody or even a multi-blackbody signal. Using the Swift and RXTE timing ephemeris for SGR J1550-5418 we construct the distribution of the XRT burst counts with spin phase and find that it is not correlated with the persistent X-ray emission pulse phase from SGR J1550-5418. These results indicate that the burst emitting sites on the neutron star need not be co-located with hot spots emitting the bulk of the persistent X-ray emission. Finally, we show that there is a significant pulse phase dependence of the XRT burst counts, likely demonstrating that the surface magnetic field of SGR J1550-5418 is not uniform over the emission zone, since it is anticipated that regions with stronger surface magnetic field could trigger bursts more efficiently.Comment: accepted for publication in The Astrophysical Journa

Quantum tunneling of a complex systems: effects of finite size and intrinsic structure

A simple model is considered to study the effects of finite size and internal structure in the tunneling of bound two-body systems through a potential barrier. It is demonstrated that these effects are able to increase the tunneling probability. Applications may include nuclear fusion,hydrogen atom and Cooper pair tunneling.Comment: 9 page

Particle Monte Carlo simulation of string-like colloidal assembly in 2 dimensions

We simulate structural phase behavior of polymer-grafted colloidal particles by molecular Monte Carlo technique. Interparticle potential, which has a finite repulsive square-step outside a rigid core of the colloid, was previously confirmed via numerical self-consistent field calculation. This model potential is purely repulsive. We simulate these model colloids in the canonical ensemble in 2 dimensions and find that these particles containing no interparticle attraction self-assemble and align in a string-like assembly, at low temperature and high density. This string-like colloidal assembly is related to percolation phenomena. Analyzing the cluster size distribution and the average string length, we build phase diagrams and discover that the average string length diverges around the region where the melting transition line and the percolation transition line cross. This result is similar to Ising spin systems, in which the percolation transition line and the order-disorder line meet at a critical point.Comment: 11 pages, 14 figure

Topological classification of vortex-core structures of spin-1 Bose-Einstein condensates

We classify vortex-core structures according to the topology of the order parameter space. By developing a method to characterize how the order parameter changes inside the vortex core. We apply this method to the spin-1 Bose-Einstein condensates and show that the vortex-core structures are classified by winding numbers that are locally defined in the core region. We also show that a vortex-core structure with a nontrivial winding number can be stabilized under a negative quadratic Zeeman effect.Comment: 16 pages, 6 figure

Tunneling of a composite particle: Effects of intrinsic structure

We consider simple models of tunneling of an object with intrinsic degrees of freedom. This important problem was not extensively studied until now, in spite of numerous applications in various areas of physics and astrophysics. We show possibilities of enhancement for the probability of tunneling due to the presence of intrinsic degrees of freedom split by weak external fields or by polarizability of the slow composite object.Comment: 6 pages, 3 figures, version to be published in Journal of Physics

Self-Ordering Point Clouds

In this paper we address the task of finding representative subsets of points in a 3D point cloud by means of a point-wise ordering. Only a few works have tried to address this challenging vision problem, all with the help of hard to obtain point and cloud labels. Different from these works, we introduce the task of point-wise ordering in 3D point clouds through self-supervision, which we call self-ordering. We further contribute the first end-to-end trainable network that learns a point-wise ordering in a self-supervised fashion. It utilizes a novel differentiable point scoring-sorting strategy and it constructs an hierarchical contrastive scheme to obtain self-supervision signals. We extensively ablate the method and show its scalability and superior performance even compared to supervised ordering methods on multiple datasets and tasks including zero-shot ordering of point clouds from unseen categories

Positions of Point-Nodes in Borocarbide Superconductor YNi2B2C

To determine the superconducting gap function of YNi2B2C, we calculate the local density of states (LDOS) around a single vortex core with the use of Eilenberger theory and the band structure calculated by local density approximation assuming various gap structures with point-nodes at different positions. We also calculate the angular-dependent heat capacity in the vortex state on the basis of the Doppler-Shift method. Comparing our results with the STM/STS experiment, the angular-dependent heat capacity and thermal conductivity, we propose the gap-structure of YNi2B2C, which has the point-nodes and gap minima along . Our gap-structure is consistent with all results of angular-resolved experiments.Comment: 7 pages, 5 figure