A BCU method for direct analysis of power system transient stability

A boundary of stability region based controlling unstable equilibrium point method (BCU method) for direct analysis of power system transient stability is presented. Features distinguishing the BCU method from the existing direct methods are that it consistently finds the exact controlling unstable equilibrium point (UEP) relative to a fault-on trajectory and that it has a sound theoretical basis. Moreover, the BCU method appears to be fast. This method is based on the relationship between the boundary of stability region of a power system and that of a reduced system. The BCU method finds the controlling UEP of the original system via a reduced system whose controlling UEP is easier and cheaper to compute. Effective numerical schemes to speed up the presented method are also proposed. This method has been tested on several power systems with very promising results. Simulation results on a 50 generator, 145 bus system are presented along with a comparison between the results obtained using the BCU method and another existing method.published_or_final_versio

Mass‐transport complexes (MTCs) document subsidence patterns in a northern Gulf of Mexico salt minibasin

Mass‐transport complexes (MTCs) dominate the stratigraphic record of many salt‐influenced sedimentary basins. Commonly in such settings, halokinesis is invoked as a primary trigger for MTC emplacement, although the link between specific phases of salt movement, and related minibasin dynamics, remains unclear. Here, we use high‐quality 3D seismic reflection and well data to constrain the composition, geometry and distribution (in time and space) of six MTCs preserved in a salt‐confined, supra‐canopy minibasin in the northern Gulf of Mexico, and to assess how their emplacement relate to regional and local controls. We define three main tectono‐sedimentary phases in the development of the minibasin: (a) initial minibasin subsidence and passive diapirism, during which time deposition was dominated by relatively large‐volume MTCs (c. 25 km3) derived from the shelf‐edge or upper slope; (b) minibasin margin uplift and steepening, during which time small‐volume MTCs (c. 20 km3) derived from the shelf‐edge or upper slope were emplaced; and (c) active diapirism, during which time very small volume MTCs (c. 1 km3) were emplaced, locally derived from the diapir flanks or roofs. We present a generic model that emphasizes the dynamic nature of minibasin evolution, and how MTC emplacement relates to halokinetic sequence development. Although based on a single data‐rich case study, our model may be applicable to other MTC‐rich, salt‐influenced sedimentary basins

Identification of Boundary Conditions Using Natural Frequencies

The present investigation concerns a disc of varying thickness of whose flexural stiffness $D$ varies with the radius $r$ according to the law $D=D_0 r^m$, where $D_0$ and $m$ are constants. The problem of finding boundary conditions for fastening this disc, which are inaccessible to direct observation, from the natural frequencies of its axisymmetric flexural oscillations is considered. The problem in question belongs to the class of inverse problems and is a completely natural problem of identification of boundary conditions. The search for the unknown conditions for fastening the disc is equivalent to finding the span of the vectors of unknown conditions coefficients. It is shown that this inverse problem is well posed. Two theorems on the uniqueness and a theorem on stability of the solution of this problem are proved, and a method for establishing the unknown conditions for fastening the disc to the walls is indicated. An approximate formula for determining the unknown conditions is obtained using first three natural frequencies. The method of approximate calculation of unknown boundary conditions is explained with the help of three examples of different cases for the fastening the disc (rigid clamping, free support, elastic fixing). Keywords: Boundary conditions, a disc of varying thickness,inverse problem, Plucker condition.Comment: 19 page

On the force field optimisation of β -lactam cores using the force field Toolkit

When employing molecular dynamics (MD) simulations for computer-aided drug design, the quality of the used force fields is highly important. Here we present reparametrisations of the force fields for the core molecules from 9 different β-lactam classes, for which we utilized the force field Toolkit and Gaussian calculations. We focus on the parametrisation of the dihedral angles, with the goal of reproducing the optimised quantum geometry in MD simulations. Parameters taken from CGenFF turn out to be a good initial guess for the multiplicity of each dihedral angle, but the key to a successful parametrisation is found to lie in the phase shifts. Based on the optimised quantum geometry, we come up with a strategy for predicting the phase shifts prior to the dihedral potential fitting. This allows us to successfully parameterise 8 out of the 11 molecules studied here, while the remaining 3 molecules can also be parameterised with small adjustments. Our work highlights the importance of predicting the dihedral phase shifts in the ligand parametrisation protocol, and provides a simple yet valuable strategy for improving the process of parameterising force fields of drug-like molecules

Osteological and Biomolecular Evidence of a 7000-Year-Old Case of Hypertrophic Pulmonary Osteopathy Secondary to Tuberculosis from Neolithic Hungary

Seventy-one individuals from the late Neolithic population of the 7000-year-old site of Hódmezővásárhely-Gorzsa were examined for their skeletal palaeopathology. This revealed numerous cases of infections and non-specific stress indicators in juveniles and adults, metabolic diseases in juveniles, and evidence of trauma and mechanical changes in adults. Several cases showed potential signs of tuberculosis, particularly the remains of the individual HGO-53. This is an important finding that has significant implications for our understanding of this community. The aim of the present study was to seek biomolecular evidence to confirm this diagnosis. HGO-53 was a young male with a striking case of hypertrophic pulmonary osteopathy (HPO), revealing rib changes and cavitations in the vertebral bodies. The initial macroscopic diagnosis of HPO secondary to tuberculosis was confirmed by analysis of Mycobacterium tuberculosis complex specific cell wall lipid biomarkers and corroborated by ancient DNA (aDNA) analysis. This case is the earliest known classical case of HPO on an adult human skeleton and is one of the oldest palaeopathological and palaeomicrobiological tuberculosis cases to date

Mycobacterium tuberculosis Complex Lipid Virulence Factors Preserved in the 17,000 Year Old Skeleton of an Extinct Bison, Bison antiquus

Tracing the evolution of ancient diseases depends on the availability and accessibility of suitable biomarkers in archaeological specimens. DNA is potentially information-rich but it depends on a favourable environment for preservation. In the case of the major mycobacterial pathogens, Mycobacterium tuberculosis and Mycobacterium leprae, robust lipid biomarkers are established as alternatives or complements to DNA analyses. A DNA report, a decade ago, suggested that a 17,000 year old skeleton of extinct Bison antiquus, from Natural Trap Cave, Wyoming, was the oldest known case of tuberculosis. In the current study, key mycobacterial lipid virulence factor biomarkers were detected in the same two samples from this bison. Fluorescence high-performance liquid chromatography (HPLC) indicated the presence of mycolic acids of the mycobacterial type, but they were degraded and could not be precisely correlated with tuberculosis. However, pristine profiles of C29, C30 and C32 mycocerosates and C27 mycolipenates, typical of the Mycobacterium tuberculosis complex, were recorded by negative ion chemical ionization gas chromatography mass spectrometry of pentafluorobenzyl ester derivatives. These findings were supported by the detection of C34 and C36 phthiocerols, which are usually esterified to the mycocerosates. The existence of Pleistocene tuberculosis in the Americas is confirmed and there are many even older animal bones with well-characterised tuberculous lesions similar to those on the analysed sample. In the absence of any evidence of tuberculosis in human skeletons older than 9,000 years BP, the hypothesis that this disease evolved as a zoonosis, before transfer to humans, is given detailed consideration and discussion

Broadband gradient impedance matching using an acoustic metamaterial for ultrasonic transducers

2016-2017 > Academic research: refereed > Publication in refereed journal201804_a bcmaVersion of RecordPublishe

Photobactericidal activity activated by thiolated gold nanoclusters at low flux levels of white light

The emergence of antibiotic resistant bacteria is a major threat to the practice of modern medicine. Photobactericidal agents have obtained significant attention as promising candidates to kill bacteria, and they have been extensively studied. However, to obtain photobactericidal activity, an intense white light source or UV-activation is usually required. Here we report a photobactericidal polymer containing crystal violet (CV) and thiolated gold nanocluster ([Au25(Cys)18]) activated at a low flux levels of white light. It was shown that the polymer encapsulated with CV do not have photobactericidal activity under white light illumination of an average 312 lux. However, encapsulation of [Au25(Cys)18] and CV into the polymer activates potent photobactericidal activity. The study of the photobactericidal mechanism shows that additional encapsulation of [Au25(Cys)18] into the CV treated polymer promotes redox reactions through generation of alternative electron transfer pathways, while it reduces photochemical reaction type-ІІ pathways resulting in promotion of hydrogen peroxide (H2O2) production

Multiplex quantitative PCR for single-reaction genetically modified (GM) plant detection and identification of false-positive GM plants linked to Cauliflower mosaic virus (CaMV) infection.

BACKGROUND:Most genetically modified (GM) plants contain a promoter, P35S, from the plant virus, Cauliflower mosaic virus (CaMV), and many have a terminator, TNOS, derived from the bacterium, Agrobacterium tumefaciens. Assays designed to detect GM plants often target the P35S and/or TNOS DNA sequences. However, because the P35S promoter is derived from CaMV, these detection assays can yield false-positives from non-GM plants infected by this naturally-occurring virus. RESULTS:Here we report the development of an assay designed to distinguish CaMV-infected plants from GM plants in a single multiplexed quantitative PCR (qPCR) reaction. Following initial testing and optimization via PCR and singleplex-to-multiplex qPCR on both plasmid and plant DNA, TaqMan qPCR probes with different fluorescence wavelengths were designed to target actin (a positive-control plant gene), P35S, P3 (a CaMV-specific gene), and TNOS. We tested the specificity of our quadruplex qPCR assay using different DNA extracts from organic watercress and both organic and GM canola, all with and without CaMV infection, and by using commercial and industrial samples. The limit of detection (LOD) of each target was determined to be 1% for actin, 0.001% for P35S, and 0.01% for both P3 and TNOS. CONCLUSIONS:This assay was able to distinguish CaMV-infected plants from GM plants in a single multiplexed qPCR reaction for all samples tested in this study, suggesting that this protocol is broadly applicable and readily transferrable to any interested parties with a qPCR platform