Linking individual behaviour to community scale patterns in fungi

The fungi comprise a separate kingdom of life and epitomise the indeterminate growth form. Very little is known about the factors that influence the nature of fungal diversity and the link between individual behaviour and the structure and function of fungal communities is particularly poorly understood. Here, we present a theoretical framework that is capable of elucidating this link. An individual-based model for fungal community dynamics is introduced that has been developed from a physiologically based model for the fungal phenotype. The model is used to explore the role of individual interactions, the production of an external inhibitor field and the quality of the external environment on the structure and diversity of the resulting community. We show that traits relating to growth rate, autophagic behaviour and the production of inhibitors are key in influencing the success of a particular genotype in a community. The species richness increases with the amount of available resource. This is the first model of fungal community dynamics that introduces the concept of a biomass-based abundance distribution function that can be described by the log-normal form which typically corresponds to communities in equilibrium. The species abundance curve was stable to changes in the relative location of inocula, although the ranked abundance of the individuals was not. We present the first attempt to identify the traits that affect the form of that curve. Future studies should examine the role of environmental heterogeneity and spore dispersal

Reappraising elastic thickness variation at oceanic trenches

We reassess the variation of elastic thickness as a function of lithospheric plate age using a global database of bathymetric and free-air gravity profiles which are perpendicular to oceanic trenches. As in many previous studies, our starting point is the well-known floating elastic plate model. In order to remove the influence of short-wavelength features not associated with lithospheric bending, adjacent profiles from 10-Myr bins have been stacked together to construct average profiles with standard deviations. Each average profile was then inverted in a two-stage procedure. First, singular value decomposition was used to determine two unknown flexural parameters, together with a regional slope and offset, for any given elastic thickness. This procedure was repeated for a range of elastic thicknesses. Second, residual misfit was plotted as a function of elastic thickness, and the global minimum was identified. This two-stage procedure makes no prior assumptions about magnitude of the load, size of the bending moment, or whether the elastic plate is broken/continuous. We obtained excellent fits between theory and observation for both bathymetric and gravity profiles from lithosphere with an age range of 0–150 Ma. The shape of the residual misfit function indicates the degree of confidence we have in our elastic thickness estimates. The lower limit of elastic thickness is usually well determined but upper limits are often poorly constrained. Inverse modeling was carried out using a range of profile lengths (250–300, 500, and 700 km). In general, our estimates show no consistent increase of elastic thickness as a function of plate age. This surprising result is consistent with recent reassessments of elastic thickness beneath seamounts and implies either that elastic thickness is independent of plate age or that elastic thickness cannot be measured with sufficient accuracy to reveal such a relationship. Modeling of short free-air gravity profiles (250–300 km) does tentatively suggest that elastic thickness increases linearly from 5 to 10 km between 0 and 20 Ma and from 10 to 15 km between 20 and 150 Ma. This variation roughly matches the depth to the 200°C isotherm which corresponds to an homologous temperature of 0.4 for wet peridotite. Unfortunately, for longer profile lengths, there is no temporal dependence, and elastic thicknesses vary considerably for all plate ages. Bathymetric profile modeling yields similar results although uncertainties are larger

Space Applications of Solid State Luminescent Phenomena

Luminescent phenomena in interplanetary space and moon related to luminescent, thermoluminescent, and cathodoluminescent properties of terrestrial minerals and rock

The strength and timing of the mitochondrial bottleneck in salmon suggests a conserved mechanism in vertebrates

In most species mitochondrial DNA (mtDNA) is inherited maternally in an apparently clonal fashion, although how this is achieved remains uncertain. Population genetic studies show not only that individuals can harbor more than one type of mtDNA (heteroplasmy) but that heteroplasmy is common and widespread across a diversity of taxa. Females harboring a mixture of mtDNAs may transmit varying proportions of each mtDNA type (haplotype) to their offspring. However, mtDNA variants are also observed to segregate rapidly between generations despite the high mtDNA copy number in the oocyte, which suggests a genetic bottleneck acts during mtDNA transmission. Understanding the size and timing of this bottleneck is important for interpreting population genetic relationships and for predicting the inheritance of mtDNA based disease, but despite its importance the underlying mechanisms remain unclear. Empirical studies, restricted to mice, have shown that the mtDNA bottleneck could act either at embryogenesis, oogenesis or both. To investigate whether the size and timing of the mitochondrial bottleneck is conserved between distant vertebrates, we measured the genetic variance in mtDNA heteroplasmy at three developmental stages (female, ova and fry) in chinook salmon and applied a new mathematical model to estimate the number of segregating units (N(e)) of the mitochondrial bottleneck between each stage. Using these data we estimate values for mtDNA Ne of 88.3 for oogenesis, and 80.3 for embryogenesis. Our results confirm the presence of a mitochondrial bottleneck in fish, and show that segregation of mtDNA variation is effectively complete by the end of oogenesis. Considering the extensive differences in reproductive physiology between fish and mammals, our results suggest the mechanism underlying the mtDNA bottleneck is conserved in these distant vertebrates both in terms of it magnitude and timing. This finding may lead to improvements in our understanding of mitochondrial disorders and population interpretations using mtDNA data

The discovery of 50 minute periodic absorption events from 4U1915-05

The steady flux from 4U1916-05 which undergoes periodic absorption dips every 50 minutes was demonstrated. This period represents the underlying orbital period of the system. It is suggested that variations in the depth and duration of these events are caused by a bulge in the edge of the accretion disk, at the point where the gas stream impacts the disk. The mass losing star in this system is probably a low mass white dwarf. The spectrum of the dips indicates that the metallicity of the absorbing material is at least a factor 17 below solar values

X-ray spectroscopy of late-type stars

The solid state spectrometer on the Einstein Observatory determined .4 - 4.5 keV spectra for Capella, Algol and 6 RS CVn binaries. All show evidence for a bimodal distribution of emission measure with temperature with one component approximately 7 million degrees and one approximately 40 million degrees. The spread in values of both luminosity and emission measure is 10 for the low temperature component and approximately 500 for the high temperature component. Line emission due to Fe can be identified in most of them and abundances of Si, S and Fe are consistent with approximately solar values in all cases. Estimates indicate dimensions of the emitting regions are on the order of the stellar size and the binary separation for the low and high temperature components, respectively, unless the pressures are high. Variations in the flux were observed, mostly in the hard component for the RS CVn binaries, in the soft component for Capella. A flare was observed during primary eclipse of Algol. The possibility is discussed that the other variations could all be due to intrinsic variability with a time scale of hours-days rather than eclipse or modulation with photometric phase

Confirmation of the 62 Day X-Ray Periodicity from M82

Using 400 days of new X-ray monitoring of M82, we confirm the 62 day periodicity previously reported. In the full data set spanning 1124 days, we find a period of 62.0 +/- 0.3 days and a coherence, Q = 22.3, that is consistent with a strictly periodic signal. We estimate that the probability of chance occurrence of our observed signal is 6E-7. The light curve folded at this period is roughly sinusoidal and has a peak to peak amplitude of (0.99 +/- 0.10) x 10^-11 erg cm^-2 s^-1. Confirmation of the periodicity strengthens our previous suggestion that the 62 day modulation is due to orbital motion within an X-ray binary.Comment: 4 pages, to appear in Ap

Synchronization and oscillatory dynamics in heterogeneous mutually inhibited neurons

We study some mechanisms responsible for synchronous oscillations and loss of synchrony at physiologically relevant frequencies (10-200 Hz) in a network of heterogeneous inhibitory neurons. We focus on the factors that determine the level of synchrony and frequency of the network response, as well as the effects of mild heterogeneity on network dynamics. With mild heterogeneity, synchrony is never perfect and is relatively fragile. In addition, the effects of inhibition are more complex in mildly heterogeneous networks than in homogeneous ones. In the former, synchrony is broken in two distinct ways, depending on the ratio of the synaptic decay time to the period of repetitive action potentials ($\tau_s/T$), where $T$ can be determined either from the network or from a single, self-inhibiting neuron. With $\tau_s/T > 2$, corresponding to large applied current, small synaptic strength or large synaptic decay time, the effects of inhibition are largely tonic and heterogeneous neurons spike relatively independently. With $\tau_s/T < 1$, synchrony breaks when faster cells begin to suppress their less excitable neighbors; cells that fire remain nearly synchronous. We show numerically that the behavior of mildly heterogeneous networks can be related to the behavior of single, self-inhibiting cells, which can be studied analytically.Comment: 17 pages, 6 figures, Kluwer.sty. Journal of Compuational Neuroscience (in press). Originally submitted to the neuro-sys archive which was never publicly announced (was 9802001