High resolution forecast models of water vapour over mountains: comparison of results from the UM and MERIS

Propagation delay due to variable tropospheric water vapor (WV) is one of the most intractable problems for radar interferometry, particularly over mountains. The WV field can be simulated by an atmospheric model, and the difference between the two fields is used to correct the radar interferogram. Here, we report our use of the U.K. Met Office Unified Model in a nested mode to produce high-resolution forecast fields for the 3-km-high Mount Etna volcano. The simulated precipitablewater field is validated against that retrieved from the Medium Resolution Imaging Spectrometer (MERIS) radiometer on the Envisat satellite, which has a resolution of 300 m. Two case studies, one from winter (November 24, 2004) and one from summer (June 25, 2005), show that the mismatch between the model and the MERIS fields (rms = 1.1 and 1.6 mm, respectively) is small. One of the main potential sources of error in the models is the timing of the WV field simulation. We show that long-wavelength upper tropospheric troughs of low WV could be identified in both the model output and Meteosat WV imagery for the November 24, 2004 case and used to choose the best time of model output. © 2007 IEEE

Salicylic acid collaborates with gene silencing to tomato defense against tomato yellow leaf curl virus (TYLCV)

Antiviral research in plants has been focused on RNA silencing (i.e. RNA interference), and several studies suggest that salicylic acid (SA)-mediated resistance is a key part of plant antiviral defense. However, the antiviral defense mechanism of SA-mediation is still unclear, and several recent studies have suggested a connection between SA-mediated defense and RNA silencing, which needs further characterization in TYLCV infection. In this study, both SA-mediated defense and the RNA silencing mechanism were observed to play an important role in the antiviral response against TYLCV. First, we found that SA application enhanced the resistance to TYLCV in tomato plants. The expression of RNA-silencing-related genes, such as SlDCL1, SlDCL2, SlDCL4, SlRDR2, SlRDR3a, SlRDR6a, SlAGO1, and SlAGO4, were significantly triggered by exogenous SA application and inoculation with TYLCV, respectively. Furthermore, silencing of SlDCL2, SlDCL4 in tomato resulted in attenuated resistance to TYLCV, and reduced the expression of defense-related genes (SlPR1 and SlPR1b) in SA-mediated defense after infection with TYLCV, particularly in SlDCL2/SlDCL4-silenced plants. Taken together, we conclude that SA collaborates with gene silencing in tomato defense against TYLCV

Robust designs for Poisson regression models

We consider the problem of how to construct robust designs for Poisson regression models. An analytical expression is derived for robust designs for first-order Poisson regression models where uncertainty exists in the prior parameter estimates. Given certain constraints in the methodology, it may be necessary to extend the robust designs for implementation in practical experiments. With these extensions, our methodology constructs designs which perform similarly, in terms of estimation, to current techniques, and offers the solution in a more timely manner. We further apply this analytic result to cases where uncertainty exists in the linear predictor. The application of this methodology to practical design problems such as screening experiments is explored. Given the minimal prior knowledge that is usually available when conducting such experiments, it is recommended to derive designs robust across a variety of systems. However, incorporating such uncertainty into the design process can be a computationally intense exercise. Hence, our analytic approach is explored as an alternative

Furnishing the Galaxy with Pulsars

The majority of pulsar population synthesis studies performed to date have focused on isolated pulsar evolution. Those that have incorporated pulsar evolution within binary systems have tended to either treat binary evolution poorly of evolve the pulsar population in an ad-hoc manner. Here we present the first model of the Galactic field pulsar population that includes a comprehensive treatment of both binary and pulsar evolution. Synthetic observational surveys mimicking a variety of radio telescopes are then performed on this population. As such, a complete and direct comparison of model data with observations of the pulsar population within the Galactic disk is now possible. The tool used for completing this work is a code comprised of three components: stellar/binary evolution, Galactic kinematics and survey selection effects. Here we give a brief overview of the method and assumptions involved with each component. Some preliminary results are also presented as well as plans for future applications of the code.Comment: 3 pages, 3 figures, Conference: "40 years of pulsars: Millisecond pulsars, magnetars and more", McGill University, Montreal, Canada, ed. A.Cumming et al., AI

Isolation site influences virulence phenotype of serotype 14 Streptococcus pneumoniae strains belonging to multilocus sequence type 15

Streptococcus pneumoniae is a diverse species causing invasive as well as localized infections that result in massive global morbidity and mortality. Strains vary markedly in pathogenic potential, but the molecular basis is obscured by the diversity and plasticity of the pneumococcal genome. We have previously reported that S. pneumoniae serotype 3 isolates belonging to the same multilocus sequence type (MLST) differed markedly in in vitro and in vivo phenotypes, in accordance with the clinical site of isolation, suggesting stable niche adaptation within a clonal lineage. In the present study, we have extended our analysis to serotype 14 clinical isolates from cases of sepsis or otitis media that belong to the same MLST (ST15). In a murine intranasal challenge model, five ST15 isolates (three from blood and two from ears) colonized the nasopharynx to similar extents. However, blood and ear isolates exhibited significant differences in bacterial loads in other host niches (lungs, ear, and brain) at both 24 and 72 h postchallenge. In spite of these differences, blood and ear isolates were present in the lungs at similar levels at 6 h postchallenge, suggesting that early immune responses may underpin the distinct virulence phenotypes. Transcriptional analysis of lung tissue from mice infected for 6 h with blood isolates versus ear isolates revealed 8 differentially expressed genes. Two of these were exclusively expressed in response to infection with the ear isolate. These results suggest a link between the differential capacities to elicit early innate immune responses and the distinct virulence phenotypes of clonally related S. pneumoniae strains

Lentivector Transduction Improves Outcomes Over Transplantation of Human HSCs Alone in NOD/SCID/Fabry Mice

Fabry disease is a lysosomal storage disorder caused by a deficiency of a-galactosidase A (a-gal A) activity that results in progressive globotriaosylceramide (Gb(3)) deposition. We created a fully congenic nonobese diabetic (NOD)/severe combined immunodeficiency (SCID)/Fabry murine line to facilitate the in vivo assessment of human cell-directed therapies for Fabry disease. This pure line was generated after 11 generations of backcrosses and was found, as expected, to have a reduced immune compartment and background a-gal A activity. Next, we transplanted normal human CD34(+) cells transduced with a control (lentiviral vector-enhanced green fluorescent protein (LV-eGFP)) or a therapeutic bicistronic LV (LV-a-gal A/internal ribosome entry site (IRES)/hCD25). While both experimental groups showed similar engraftment levels, only the therapeutic group displayed a significant increase in plasma a-gal A activity. Gb(3) quantification at 12 weeks revealed metabolic correction in the spleen, lung, and liver for both groups. Importantly, only in the therapeutically-transduced cohort was a significant Gb(3) reduction found in the heart and kidney, key target organs for the amelioration of Fabry disease in humans.Fil: Pacienza, Natalia Alejandra. University Health Network; Canadá. Consejo Nacional de Investigaciones Científicas y Técnicas; ArgentinaFil: Yoshimitsu, Makoto. Kagoshima University; Japón. University Health Network; CanadáFil: Mizue, Nobuo. University Health Network; CanadáFil: Au, Bryan C. Y.. University Health Network; CanadáFil: Wang, James C. M.. University Health Network; CanadáFil: Fan, Xin. University Health Network; CanadáFil: Takenaka, Toshihiro. Kagoshima University; JapónFil: Medin, Jeffrey A. University Health Network; Canadá. University of Toronto; Canad

Shot noise limited detection of OH using the technique of laser induced fluorescence

Nearly shot-noise limited detection of OH using the technique of laser-induced fluorescence is reported. A LIDAR configuration is used to excite fluorescence in a large volume and a narrow-bandwidth interference filter provides spectral discrimination. This arrangement alleviates the effect of ozone interference and facilitates image processing at relatively close distances. The detection limit is determined mainly by the shot-noise of the solar background. Ground-based measurements in Dearborn indicate a detection limit of better than 1 x 10 to the 6th power OH/cubic cm over a forty-minute acquisition period. Under favorable conditions, a comparable detection limit was also observed for airborne measurements

Quasi-local Energy for Spherically Symmetric Spacetimes

We present two complementary approaches for determining the reference for the covariant Hamiltonian boundary term quasi-local energy and test them on spherically symmetric spacetimes. On the one hand, we isometrically match the 2-surface and extremize the energy. This can be done in two ways, which we call programs I (without constraint) and II (with additional constraints). On the other hand, we match the orthonormal 4-frames of the dynamic and the reference spacetimes. Then, if we further specify the observer by requiring the reference displacement to be the timelike Killing vector of the reference, the result is the same as program I, and the energy can be positive, zero, or even negative. If, instead, we require that the Lie derivatives of the two-area along the displacement vector in both the dynamic and reference spacetimes to be the same, the result is the same as program II, and it satisfies the usual criteria: the energies are non-negative and vanish only for Minkowski (or anti-de Sitter) spacetime.Comment: 16 pages, no figure