An idealised study for the evolution of a shoreface nourishment

We develop an idealised one dimensional (cross-shore) morphodynamic model that couples wave, tide and sediment dynamics to study the effect and evolution of a shoreface nourishment. Sediment fluxes driven by wave skewness, wave asymmetry (both onshore) and return flow (offshore) are considered. With the aid of new analytical expressions for the skewness and standard deviation of wave velocity and acceleration, sediment fluxes are calculated. Nourishment is viewed as a perturbation to the system in equilibrium that is subject to the divergence of the perturbed sediment flux and a gravity driven diffusion term. Depending on the location, a nourishment may provide a feeder or lee effect. In moderate and mild wave conditions, the evolution of a nourishment primarily depends on the relative location of nourishment and break point. Placed well offshore of the break point, the nourishment induces an overall positive perturbation in sediment flux, resulting in onshore migration (feeder effect). Located closer to the break point, the nourishment induces an earlier wave breaking, which dissipates part of the wave energy (lee effect), leading to a negative sediment flux perturbation around this break point and a positive sediment flux perturbation around the break point of the un-nourished beach. Depending on the intensity of the earlier breaking, the nourishment either migrates onshore (weak break) or splits into onshore and offshore moving parts (strong break). The relative importance of the diffusion term and the divergence of perturbed sediment flux may lead to a primarily migrating or decaying evolution of nourishment. In storm wave conditions, the nourishment tends to move offshore due to the predominance of return flow driven sediment flux. The sensitivity to wave period and tide are also studied. Model results are consistent with observations, as well as prevailing theory on cross-shore sediment transport

Viewing the efficiency of chaos control

This paper aims to cast some new light on controlling chaos using the OGY- and the Zero-Spectral-Radius methods. In deriving those methods we use a generalized procedure differing from the usual ones. This procedure allows us to conveniently treat maps to be controlled bringing the orbit to both various saddles and to sources with both real and complex eigenvalues. We demonstrate the procedure and the subsequent control on a variety of maps. We evaluate the control by examining the basins of attraction of the relevant controlled systems graphically and in some cases analytically

Drinfeld twist and symmetric Bethe vectors of the open XYZ chain with non-diagonal boundary terms

With the help of the Drinfeld twist or factorizing F-matrix for the eight-vertex solid-on-solid (SOS) model, we find that in the F-basis provided by the twist the two sets of pseudo-particle creation operators simultaneously take completely symmetric and polarization free form. This allows us to obtain the explicit and completely symmetric expressions of the two sets of Bethe states of the model.Comment: Latex file, 25 page

Evolution of asexual and sexual reproduction in the aspergilli

Aspergillus nidulans has long-been used as a model organism to gain insights into the genetic basis of asexual and sexual developmental processes both in other members of the genus Aspergillus, and filamentous fungi in general. Paradigms have been established concerning the regulatory mechanisms of conidial development. However, recent studies have shown considerable genome divergence in the fungal kingdom, questioning the general applicability of findings from Aspergillus, and certain longstanding evolutionary theories have been questioned. The phylogenetic distribution of key regulatory elements of asexual reproduction in A. nidulans was investigated in a broad taxonomic range of fungi. This revealed that some proteins were well conserved in the Pezizomycotina (e.g. AbaA, FlbA, FluG, NsdD, MedA, and some velvet proteins), suggesting similar developmental roles. However, other elements (e.g. BrlA) had a more restricted distribution solely in the Eurotiomycetes, and it appears that the genetic control of sporulation seems to be more complex in the aspergilli than in some other taxonomic groups of the Pezizomycotina. The evolution of the velvet protein family is discussed based on the history of expansion and contraction events in the early divergent fungi. Heterologous expression of the A. nidulans abaA gene in Monascus ruber failed to induce development of complete conidiophores as seen in the aspergilli, but did result in increased conidial production. The absence of many components of the asexual developmental pathway from members of the Saccharomycotina supports the hypothesis that differences in the complexity of their spore formation is due in part to the increased diversity of the sporulation machinery evident in the Pezizomycotina. Investigations were also made into the evolution of sex and sexuality in the aspergilli. MAT loci were identified from the heterothallic Aspergillus (Emericella) heterothallicus and Aspergillus (Neosartorya) fennelliae and the homothallic Aspergillus pseudoglaucus (=Eurotium repens). A consistent architecture of the MAT locus was seen in these and other heterothallic aspergilli whereas much variation was seen in the arrangement of MAT loci in homothallic aspergilli. This suggested that it is most likely that the common ancestor of the aspergilli exhibited a heterothallic breeding system. Finally, the supposed prevalence of asexuality in the aspergilli was examined. Investigations were made using A. clavatus as a representative ‘asexual’ species. It was possible to induce a sexual cycle in A. clavatus given the correct MAT1-1 and MAT1-2 partners and environmental conditions, with recombination confirmed utilising molecular markers. This indicated that sexual reproduction might be possible in many supposedly asexual aspergilli and beyond, providing general insights into the nature of asexuality in fungi.National Natural Science Foundation of China 31601446National Research Foundation of Korea 2016010945Intelligent Synthetic Biology Center of Global Frontier Projects 2015M3A6A8065838Biotechnology and Biological Sciences Research CouncilGovernment of IraqMinisterio de Economía y Competitividad BIO2015-67148-

Chaotic dynamics of cold atoms in far-off-resonant donut beam

We describe the classical two dimensinal nonlinear dynamics of cold atoms in far-off-resonant donut beams. We show that there chaotic dynamics exists for charge greater than unity, when the intensity of the beam is periodically modulated. The two dimensional distributions of atoms in $(x,y)$ plane for charge two are simulated. We show that the atoms will acumulate on several ring regions when the system enters to regime of global chaos.Comment: 8 pages, 8 figure

Prebiotic effects of oligosaccharides extracted from palm kernel expeller on different levels of Salmonella typhimurium infection in chicks

Prebiotic effects of oligosaccharides extract from palm kernel expeller (OligoPKE) on Salmonella typhimurium were investigated in chicks in two experiments. Results of the first experiment showed that OligoPKE reduced the colonization of Salmonella typhimurium in the cecum and increased the immunoglobulin A (IgA) production in the blood and jejunum. The second experiment further investigated the prebiotic efficacy of dietary supplementation of OligoPKE on three levels of Salmonella typhimurium infection (1.0 x 104 Colony-forming unit (CFU)/mL; 1.0 x 106 CFU/mL and 1.0 x 108 CFU/mL) in chicks. OligoPKE reduced the colonization of Salmonella in the medium and high levels of infection. IgA level in serum and jejunum content increased significantly in all the three levels of infection when chicks received OligoPKE in their diet. Interleukin 8, and 10; interferon-α; and tumour necrosis factor genes were up-regulated in the jejunum of the infected chicks, and OligoPKE down-regulated these gene expressions. Results of the current study indicated that OligoPKE, an oligosaccharides extract from palm kernel expeller, is capable of reducing colonization of Salmonella typhimurium in young chicks, and boosted their immunity.Keywords: chicken, immunoglobulin, immune gene, microbial populatio

LRRK2 A419V is not associated with Parkinson's disease in different Chinese populations

10.1371/journal.pone.0036123PLoS ONE77

Cosmic microwave background and large scale structure limits on the interaction between dark matter and baryons

We study the effect on the cosmic microwave background (CMB) anisotropy and large scale structure (LSS) power spectrum of a scattering interaction between cold dark matter and baryons. This scattering alters the CMB anisotropy and LSS spectrum through momentum transfer between the cold dark matter particles and the baryons. We find that current CMB observations can put an upper limit on the scattering cross section which is comparable with or slightly stronger than previous disk heating constraints at masses greater than 1 GeV, and much stronger at smaller masses. When large-scale structure constraints are added to the CMB limits, our constraint is more stringent than this previous limit at all masses. In particular, a dark matter-baryon scattering cross section comparable to the ``Spergel-Steinhardt'' cross section is ruled out for dark matter mass greater than 1 GeV.Comment: 8 pages, 2 figures, use RevTeX4, submitted to PRD replaced with revised versio