Suprathermal electron distributions in the solar transition region

Suprathermal tails are a common feature of solar wind electron velocity distributions, and are expected in the solar corona. From the corona, suprathermal electrons can propagate through the steep temperature gradient of the transition region towards the chromosphere, and lead to non-Maxwellian electron velocity distribution functions (VDFs) with pronounced suprathermal tails. We calculate the evolution of a coronal electron distribution through the transition region in order to quantify the suprathermal electron population there. A kinetic model for electrons is used which is based on solving the Boltzmann-Vlasov equation for electrons including Coulomb collisions with both ions and electrons. Initial and chromospheric boundary conditions are Maxwellian VDFs with densities and temperatures based on a background fluid model. The coronal boundary condition has been adopted from earlier studies of suprathermal electron formation in coronal loops. The model results show the presence of strong suprathermal tails in transition region electron VDFs, starting at energies of a few 10 eV. Above electron energies of 600 eV, electrons can traverse the transition region essentially collision-free. The presence of strong suprathermal tails in transition region electron VDFs shows that the assumption of local thermodynamic equilibrium is not justified there. This has a significant impact on ionization dynamics, as is shown in a companion paper

Synthetic IRIS spectra of the solar transition region: Effect of high-energy tails

The solar transition region satisfies the conditions for presence of non-Maxwellian electron energy distributions with high-energy tails at energies corresponding to the ionization potentials of many ions emitting in the EUV and UV portions of the spectrum. We calculate the synthetic Si IV, O IV, and S IV spectra in the far ultra-violet (FUV) channel of the Interface Region Imaging Spectrograph (IRIS). Ionization, recombination, and excitation rates are obtained by integration of the cross-sections or their approximations over the model electron distributions considering particle propagation from the hotter corona. The ionization rates are significantly affected by the presence of high-energy tails. This leads to the peaks of the relative abundance of individual ions to be broadened with pronounced low-temperature shoulders. As a result, the contribution functions of individual lines observable by IRIS also exhibit low-temperature shoulders, or their peaks are shifted to temperatures an order of magnitude lower than for the Maxwellian distribution. The integrated emergent spectra can show enhancements of Si IV compared toO IV by more than a factor of two. The high-energy particles can have significant impact on the emergent spectra and their presence needs to be considered even in situations without strong local acceleration

On ion-cyclotron-resonance heating of the corona and solar wind

This paper concisely summarizes and critically reviews recent work by the authors on models of the heating of the solar corona by resonance of ions with high-frequency waves (up to the proton cyclotron frequency). The quasi-linear theory of pitch angle diffusion is presented in connection with relevant solar wind proton observations. Hybrid fluid-kinetic model equations, which include wave-particle interactions and collisions, are derived. Numerical solutions are discussed, representative of the inner corona and near-Sun solar wind. A semi-kinetic model for reduced velocity distributions is presented, yielding kinetic results for heavy ions in the solar corona. It is concluded that a self-consistent treatment of particle distributions and wave spectra is required, in order to adequately describe coronal physics and to obtain agreement with observations

Activated sampling in complex materials at finite temperature: the properly-obeying-probability activation-relaxation technique

While the dynamics of many complex systems is dominated by activated events, there are very few simulation methods that take advantage of this fact. Most of these procedures are restricted to relatively simple systems or, as with the activation-relaxation technique (ART), sample the conformation space efficiently at the cost of a correct thermodynamical description. We present here an extension of ART, the properly-obeying-probability ART (POP-ART), that obeys detailed balance and samples correctly the thermodynamic ensemble. Testing POP-ART on two model systems, a vacancy and an interstitial in crystalline silicon, we show that this method recovers the proper thermodynamical weights associated with the various accessible states and is significantly faster than MD in the diffusion of a vacancy below 700 K.Comment: 10 pages, 3 figure

A mode filter for plasma waves in the Hall-MHD approximation

International audienceA filter method is presented which allows a qualitative and quantitative identification of wave modes observed with plasma experiments on satellites. Hitherto existing mode filters are based on the MHD theory and thus they are restricted to low frequencies well below the ion cyclotron frequency. The present method is generalized to cover wave modes up to the characteristic ion frequencies. The spectral density matrix determined by the observations is decomposed using the eigenvectors of the linearized Hall-MHD equations. As the wave modes are dispersive in this formalism, a precise determination of the k->-vectors requires the use of multi-point measurements. Therefore the method is particularly relevant to multi-satellite missions. The method is tested using simulated plasma data. The Hall-MHD filter is able to identify the modes excited in the model plasma and to assign the correct energetic contributions. By comparison with the former method it is shown that the simple MHD filter leads to large errors if the frequency is not well below the ion cyclotron frequency. Further the range of validity of the linear theory is examined rising the simulated wave amplitudes

Probabilistic Phase Space Trajectory Description for Anomalous Polymer Dynamics

It has been recently shown that the phase space trajectories for the anomalous dynamics of a tagged monomer of a polymer --- for single polymeric systems such as phantom Rouse, self-avoiding Rouse, Zimm, reptation, and translocation through a narrow pore in a membrane; as well as for many-polymeric system such as polymer melts in the entangled regime --- is robustly described by the Generalized Langevin Equation (GLE). Here I show that the probability distribution of phase space trajectories for all these classical anomalous dynamics for single polymers is that of a fractional Brownian motion (fBm), while the dynamics for polymer melts between the entangled regime and the eventual diffusive regime exhibits small, but systematic deviations from that of a fBm.Comment: 8 pages, two figures, 3 eps figure files, minor changes, supplementary material included moved to the appendix, references expanded, to appear in J. Phys.: Condens. Matte

Oblique propagation of arbitrary amplitude electron acoustic solitary waves in magnetized kappa-distributed plasmas

The linear and nonlinear properties of large amplitude electron-acoustic waves are investigated in a magnetized plasma comprising two distinct electron populations (hot and cold) and immobile ions. The hot electrons are assumed to be in a non-Maxwellian state, characterized by an excess of superthermal particles, here modelled by a kappa-type long-tailed distribution function. Waves are assumed to propagate obliquely to the ambient magnetic field. Two types of electrostatic modes are shown to exist in the linear regime, and their properties are briefly analyzed. A nonlinear pseudopotential type analysis reveals the existence of large amplitude electrostatic solitary waves and allows for an investigation of their propagation characteristics and existence domain, in terms of the soliton speed (Mach number). The effects of the key plasma configuration parameters, namely, the superthermality index and the cold electron density, on the soliton characteristics and existence domain, are studied. The role of obliqueness and magnetic field are discussed.Comment: Submitted to Plasma Physics and Controlled Fusio

Amplitude and Frequency Spectrum of Thermal Fluctuations of A Translocating RNA Molecule

Using a combination of theory and computer simulations, we study the translocation of an RNA molecule, pulled through a solid-state nanopore by an optical tweezer, as a method to determine its secondary structure. The resolution with which the elements of the secondary structure can be determined is limited by thermal fluctuations. We present a detailed study of these thermal fluctuations, including the frequency spectrum, and show that these rule out single-nucleotide resolution under the experimental conditions which we simulated. Two possible ways to improve this resolution are strong stretching of the RNA with a back-pulling voltage across the membrane, and stiffening of the translocated part of the RNA by biochemical means.Comment: Significantly expanded compared to previous version, 13 pages, 4 figures, to appear in J. Phys.: Condens. Matte