Omics-based monitoring of microbial dynamics across the food chain for the improvement of food safety and quality

The diffusion of high-throughput sequencing has dramatically changed the study of food microbial ecology. Amplicon-based description of the microbial community may be routinary implemented in the food industry to understand how the processing parameters and the raw material quality may affect the microbial community of the final product, as well as how the community changes during the shelf-life. In addition, application of shotgun metagenomics may represent an invaluable resource to understand the functional potential of the microbial community, identifying the presence of spoilage-associated activities or genes related to pathogenesis. Finally, retrieving Metagenome-Assembled Genomes (MAGs) of relevant species may be useful for strain-tracking along the food chain and in case of food poisoning outbreaks. This review gives an overview of the possible applications of sequencing-based approaches in the study of food microbial ecology, highlighting limitations that still prevent the spreading of these techniques to the food industry

Human Motion Mapping to a Robot Arm with Redundancy Resolution

The problem of image based visual servoing for robots working in a dynamic environment is addressed in this paper. It is assumed that the environment is observed by depth sensors which allow to measure the distance between any moving obstacle and the robot. The main idea is to control suitable image moments during the interaction phase to relax a certain number of robot’s degrees of freedom. If an obstacle approaches the robot, the main visual servoing task is attenuated or completely abandoned while the image features are kept in the camera field of view by controlling the image moments. Fuzzy rules are used to set the reference values for the controller. Beside that, the relaxed redundancy of the robot is exploited to avoid collisions as well. After removing the risk of collision, the main visual servoing task is resumed. The effectiveness of the algorithm is shown by several case studies on a KUKA LWR 4 robot arm

The new European regulation on personal data protection: significant aspects for data processing for scientific research purposes

On 27 April 2016, after a troubled gestation,, Regulation 2016/6791 of the European Parliament and of the Council on the protection of natural persons with regard to the processing of personal data and on the free movement of such data was finally published. The Regulation is to have a two-year transitional period, meaning it will actually enter into force in the first half of 2018

Control of redundant robot arms with null-space compliance and singularity-free orientation representation

This paper tackles the problem of controlling the position and orientation, expressed in a singularity-free representation form, of the end-effector of a redundant robot, while addressing an active compliant behaviour within the null-space. The manuscript extends the work in [1] by explicitly addressing the orientation part. In order to successfully accomplish the task, a dynamic controller is designed without need of any exteroceptive sensors information. A rigorous stability analysis is provided to confirm the developed theory. Experiments are finally carried out to bolster the performance of the proposed approach

Modelling soil water conent in a tomato field: proximal gamma ray spectroscopy and soil-crop system models

Proximal soil sensors are taking hold in the understanding of soil hydrogeological processes involved in precision agriculture. In this context, permanently installed gamma ray spectroscopy stations represent one of the best space-time trade off methods at field scale. This study proved the feasibility and reliability of soil water content monitoring through a seven-month continuous acquisition of terrestrial gamma radiation in a tomato test field. By employing a 1 L sodium iodide detector placed at a height of 2.25 m, we investigated the gamma signal coming from an area having a ~25 m radius and from a depth of approximately 30 cm. Experimental values, inferred after a calibration measurement and corrected for the presence of biomass, were corroborated with gravimetric data acquired under different soil moisture conditions, giving an average absolute discrepancy of about 2%. A quantitative comparison was carried out with data simulated by AquaCrop, CRITeRIA, and IRRINET soil-crop system models. The different goodness of fit obtained in bare soil condition and during the vegetated period highlighted that CRITeRIA showed the best agreement with the experimental data over the entire data-taking period while, in presence of the tomato crop, IRRINET provided the best results.Comment: 18 pages, 9 Figures, 3 Table

Indexed maximal left atrial volume predicts response to cardiac resynchronization therapy

Aims Cardiac resynchronization therapy (CRT) has shown morbidity and mortality benefits in patients with advanced congestive heart failure (HF). Since about one-third of the patients did not appear to respond to CRT, it would seem reasonable to try to identify patients more accurately before implantation. Left atrial (LA) dimension has been proposed as a powerful outcome predictor in patients with heart disease. Accordingly, the aim of this study is to prospectively assess the predictive value of LA for selecting CRT responders. Methods Fifty two consecutive patients with refractory HF, sinus rhythm and left bundle branch block were enrolled in the study and planned for CRT implantation. Clinical and echocardiographic evaluations were performed before CRT implantation and after 6 months. Three LA volumes indexed to body surface area (iLAV) were computed to evaluate the LA complexity: maximal LAV (iLAVmax), LAV just before atrial systole (iLAVpre), and minimal LAV (iLAVpost). CRT responders were defined as those who presented a reduction of > 10% in LVESVi at 6-month follow-up. Results Responders (63%) and nonresponders (37%) had similar baseline clinical characteristics and pre-implantation LV volumes. However, baseline LA volumes were significantly associated with the extent of LV reverse remodeling: in particular, baseline iLAVmax was remarkably lower in responders than in nonresponders (50.2 ± 14.1 ml/m2 vs 65.8 ± 15.7 ml/m2, p = 0.001) resulting predictive for CRT response. Conclusion Patients with small iLAV result as better responders to CRT than larger one. iLAVmax is an independent predictor of LV reverse remodeling and allows to indentify the best candidates for CRT. © 2013 Elsevier Ireland Ltd

Brainstem Sparing in Human Prion Disease: Sleep and Autonomic Function in a Long Survival Case Report

Abstract Background: The prion diseases are characterized by sleep disruption, with FFI typically characterized also by severe autonomic dysfunction and sympathetic hyperactivity. We report the results of an extensive neurophysiological and autonomic assessment in a CJD patient carrying the D178 mutation with the uncommon homozygosity for valine at codon 129. Results: A 47years old female presented with a memory impairment followed by progressive cognitive deficits and ataxia. The clinical picture slowly worsened to a state of akinetic mutism in about 2 years, and the patient died six years after the onset of symptoms. Repeated PSG and long-term actigraphic recordings, showed a peculiar, previously undescribed, pattern characterized by conservation of a rudimental circadian and ultradian rhythm, despite dramatic sleep micro-structure deterioration. We also observed a normal autonomic physiological response to orthostatic challenge and normal dynamic autonomic modulation during wake and sleep. The post-mortem brain pathology study, showed that neuronal loss was substantial in the cerebral cortex, diencephalon and thalami, but not in brainstem nuclei. Conclusions: We hypothesize that, despite a dramatic neurological picture (i.e. akinetic mutism) and a severe sleep micro-structural alteration, the persistence of an autonomic modulation and the persistence of a rudimental circadian and ultradian oscillation, are related to the relatively conserved anatomo-functional integrity of foundamental neuronal systems in the brainstem

Shallow subsurface imaging of the Piano di Pezza active normal fault (central Italy) using high-resolution refraction and electrical resistivity tomography coupled with time-domain electromagnetic data

The Piano di Pezza fault (PPF) is the north-westernmost segment of the >20 km long Ovindoli-Pezza active normal fault-system (central Italy). Although existing paleoseismic data document high vertical Holocene slip rates (~1 mm/yr) and a remarkable seismogenic potential of this fault, its subsurface setting and Pleistocene cumulative displacement are still unknown. We investigated the shallow subsurface of a key section of the PPF using seismic and electrical resistivity tomography coupled with time-domain electromagnetic measurements (TDEM). We provide 2-D Vp and resistivity images showing details of the fault structure and the geometry of the shallow basin infill down to 35-40 m depth. We can estimate the dip and the Holocene vertical displacement of the master fault. TDEM measurements in the fault hangingwall indicate that the pre-Quaternary carbonate basement may be found at ~90-100 m depth

Geometry and evolution of a fault-controlled Quaternary basin by means of TDEM and single-station ambient vibration surveys: The example of the 2009 L'Aquila earthquake area, central Italy

We applied a joint survey approach integrating time domain electromagnetic soundings and single-station ambient vibration surveys in the Middle Aterno Valley (MAV), an intermontane basin in central Italy and the locus of the 2009 L’Aquila earthquake. By imaging the buried interface between the infilling deposits and the top of the pre-Quaternary bedrock, we reveal the 3-D basin geometry and gain insights into the long-term basin evolution. We reconstruct a complex subsurface architecture, characterized by three main depocenters separated by thresholds. Basin infill thickness varies from ~200–300m in the north to more than 450m to the southeast. Our subsurface model indicates a strong structural control on the architecture of the basin and highlights that the MAV experienced considerable modifications in its configuration over time. The buried shape of the MAV suggests a recent and still ongoing predominant tectonic control by the NW-SE trending Paganica-San Demetrio Fault System (PSDFS), which crosscuts older ~ENE and NNE trending extensional faults. Furthermore, we postulate that the present-day arrangement of the PSDFS is the result of the linkage of two previously isolated fault segments. We provide constraints on the location of the southeastern boundary of the PSDFS, defining an overall ~19 km long fault system characterized by a considerable seismogenetic potential and a maximum expected magnitude larger than M6.5. This study emphasizes the benefit of combining two easily deployable geophysical methods for reconstructing the 3-D geometry of a tectonically controlled basin. Our joint approach provided us with a consistent match between these two independent estimations of the basin substratum depth within 15%.Published2236–22597T. Struttura della Terra e geodinamica2TR. Ricostruzione e modellazione della struttura crostaleJCR Journa