158 research outputs found
Systematic computation of crystal field multiplets for X-ray core spectroscopies
We present a new approach to computing multiplets for core spectroscopies,
whereby the crystal field is constructed explicitly from the positions and
charges of surrounding atoms. The simplicity of the input allows the
consideration of crystal fields of any symmetry, and in particular facilitates
the study of spectroscopic effects arising from low symmetry environments. The
interplay between polarization directions and crystal field can also be
conveniently investigated. The determination of the multiplets proceeds from a
Dirac density functional atomic calculation, followed by the exact
diagonalization of the Coulomb, spin-orbit and crystal field interactions for
the electrons in the open shells. The eigenstates are then used to simulate
X-ray Absorption Spectroscopy and Resonant Inelastic X-ray Scattering spectra.
In examples ranging from high symmetry down to low symmetry environment,
comparisons with experiments are done with unadjusted model parameters as well
as with semi-empirically optimized ones. Furthermore, predictions for the RIXS
of low-temperature MnO and for Dy in a molecular complex are proposed.Comment: Accepted for publication in Phys. Rev.
ORB5: a global electromagnetic gyrokinetic code using the PIC approach in toroidal geometry
This paper presents the current state of the global gyrokinetic code ORB5 as
an update of the previous reference [Jolliet et al., Comp. Phys. Commun. 177
409 (2007)]. The ORB5 code solves the electromagnetic Vlasov-Maxwell system of
equations using a PIC scheme and also includes collisions and strong flows. The
code assumes multiple gyrokinetic ion species at all wavelengths for the
polarization density and drift-kinetic electrons. Variants of the physical
model can be selected for electrons such as assuming an adiabatic response or a
``hybrid'' model in which passing electrons are assumed adiabatic and trapped
electrons are drift-kinetic. A Fourier filter as well as various control
variates and noise reduction techniques enable simulations with good
signal-to-noise ratios at a limited numerical cost. They are completed with
different momentum and zonal flow-conserving heat sources allowing for
temperature-gradient and flux-driven simulations. The code, which runs on both
CPUs and GPUs, is well benchmarked against other similar codes and analytical
predictions, and shows good scalability up to thousands of nodes
High intensity linac driver for the SPIRAL-2 project : Design of superconducting 88 MHz quarter wave resonators (beta 0.12), power couplers and cryomodules
ACCInternational audienceA Superconducting Linac Driver, delivering deuterons with energy up to 40 MeV (5 mA) and heavy ions with energy of 14.5 MeV/u (1 mA ), is proposed for the Spiral-2 radioactive beams facility. For the high energy section of the linac, a superconducting 88 MHz Quarter Wave Resonator (beta 0.12) has been designed and the optimisation of RF and mechanical performances will be presented. Based on the present state-of-art of the Superconducting RF technology, maximum electric surface field of 40 MV/m and magnetic surface field of 80 mT, have been adopted which should allow to reach an accelerating field of 7 MV/m (energy gain 3 MeV per resonator). A first complete prototype is under construction. The high intensity deuteron beam specifications have imposed the design of an original power coupler (maximum power 20 KW). The RF, mechanical, and thermal characteristics will be presented. The design of the cryomodule for this high energy section, integrating two QWR with its associated equipments (couplers, tuners, helium tanks), will be presented
Mean-field Study of Charge, Spin, and Orbital Orderings in Triangular-lattice Compounds ANiO2 (A=Na, Li, Ag)
We present our theoretical results on the ground states in layered
triangular-lattice compounds ANiO2 (A=Na, Li, Ag). To describe the interplay
between charge, spin, orbital, and lattice degrees of freedom in these
materials, we study a doubly-degenerate Hubbard model with electron-phonon
couplings by the Hartree-Fock approximation combined with the adiabatic
approximation. In a weakly-correlated region, we find a metallic state
accompanied by \sqroot3x\sqroot3 charge ordering. On the other hand, we obtain
an insulating phase with spin-ferro and orbital-ferro ordering in a wide range
from intermediate to strong correlation. These phases share many
characteristics with the low-temperature states of AgNiO2 and NaNiO2,
respectively. The charge-ordered metallic phase is stabilized by a compromise
between Coulomb repulsions and effective attractive interactions originating
from the breathing-type electronphonon coupling as well as the Hund's-rule
coupling. The spin-orbital-ordered insulating phase is stabilized by the
cooperative effect of electron correlations and the Jahn-Teller coupling, while
the Hund's-rule coupling also plays a role in the competition with other
orbital-ordered phases. The results suggest a unified way of understanding a
variety of low-temperature phases in ANiO2. We also discuss a keen competition
among different spin-orbital-ordered phases in relation to a puzzling behavior
observed in LiNiO2
Theoretical study and experimental result of the RF coupler prototypes of Spiral2
JACoW web site THPCH160International audienceSpiral2 is a 40 MeV-5mA deuterons and a 14.5 MeV/u-1mA heavy ions superconducting linac under construction at GANIL. The RF couplers have to provide 12 kW CW power to the cavities at 88 MHz for an accelerating field of 6.5 MV/m. Two solutions corresponding to two different technologies have been designed and two prototypes have been built. We present the technical proposals ans issues as well as the results (manufacturing, test at low and high power, multipacting...) leading to the final choice
Earthworms from Burma
13 p. ; 24 cm.Includes bibliographical references (p. 13)
Aberrant Otx2 Expression Enhances Migration and Induces Ectopic Proliferation of Hindbrain Neuronal Progenitor Cells
Dysregulation of Otx2 is a hallmark of the pediatric brain tumor medulloblastoma, yet its functional significance in the establishment of these tumors is unknown. Here we have sought to determine the functional consequences of Otx2 overexpression in the mouse hindbrain to characterize its potential role in medulloblastoma tumorigenesis and identify the cell types responsive to this lineage-specific oncogene. Expression of Otx2 broadly in the mouse hindbrain resulted in the accumulation of proliferative clusters of cells in the cerebellar white matter and dorsal brainstem of postnatal mice. We found that brainstem ectopia were derived from neuronal progenitors of the rhombic lip and that cerebellar ectopia were derived from granule neuron precursors (GNPs) that had migrated inwards from the external granule layer (EGL). These hyperplasias exhibited various characteristics of medulloblastoma precursor cells identified in animal models of Shh or Wnt group tumors, including aberrant localization and altered spatiotemporal control of proliferation. However, ectopia induced by Otx2 differentiated and dispersed as the animals reached adulthood, indicating that factors restricting proliferative lifespan were a limiting factor to full transformation of these cells. These studies implicate a role for Otx2 in altering the dynamics of neuronal progenitor cell proliferation
The kinetochore protein, CENPF, is mutated in human ciliopathy and microcephaly phenotypes
Background Mutations in microtubule-regulating genes are associated with disorders of neuronal migration and microcephaly. Regulation of centriole length has been shown to underlie the pathogenesis of certain ciliopathy phenotypes. Using a next-generation sequencing approach, we identified mutations in a novel centriolar disease gene in a kindred with an embryonic lethal ciliopathy phenotype and in a patient with primary microcephaly.
Methods and results Whole exome sequencing data from a non-consanguineous Caucasian kindred exhibiting mid-gestation lethality and ciliopathic malformations revealed two novel non-synonymous variants in CENPF, a microtubule-regulating gene. All four affected fetuses showed segregation for two mutated alleles [IVS5-2A>C, predicted to abolish the consensus splice-acceptor site from exon 6; c.1744G>T, p.E582X]. In a second unrelated patient exhibiting microcephaly, we identified two CENPF mutations [c.1744G>T, p.E582X; c.8692 C>T, p.R2898X] by whole exome sequencing. We found that CENP-F colocalised with Ninein at the subdistal appendages of the mother centriole in mouse inner medullary collecting duct cells. Intraflagellar transport protein-88 (IFT-88) colocalised with CENP-F along the ciliary axonemes of renal epithelial cells in age-matched control human fetuses but did not in truncated cilia of mutant CENPF kidneys. Pairwise co-immunoprecipitation assays of mitotic and serum-starved HEKT293 cells confirmed that IFT88 precipitates with endogenous CENP-F.
Conclusions Our data identify CENPF as a new centriolar disease gene implicated in severe human ciliopathy and microcephaly related phenotypes. CENP-F has a novel putative function in ciliogenesis and cortical neurogenesis
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