Does White Clover (Trifolium repens) Abundance in Temperate Pastures Determine Sitona obsoletus (Coleoptera: Curculionidae) Larval Populations?

To determine if host plant abundance determined the size of clover root weevil (CRW) Sitona obsoletus larval populations, a study was conducted over four years in plots sown in ryegrass (Lolium perenne) (cv. Nui) sown at either 6 or 30 kg/ha and white clover (Trifolium repens) sown at a uniform rate of 8 kg/ha. This provided a range of % white clover content to investigate CRW population establishment and impacts on white clover survival. Larval sampling was carried out in spring (October) when larval densities are near their spring peak at Lincoln (Canterbury, New Zealand) with % clover measured in autumn (April) and spring (September) of each year. Overall, mean larval densities measured in spring 2012, 2013, 2014 and 2015 were 310, 38, 59 and 31 larvae m-2, respectively. There was a significant decline in larval populations between 2012 and 2013, but spring populations were relatively uniform thereafter. The mean % white clover measured in autumns of 2012 to 2015 was 17, 10, 3 and 11%, respectively. In comparison, mean spring % white clover from 2012 to 2015, averaged c. 5% each year. Analysis relating spring (October) larval populations to % white clover measured in each plot in autumn (April) found the 2012 larval population to be statistically significantly larger in the ryegrass 6 kg/ha plots than 30 kg/ha plots. Thereafter, sowing rate had no significant effect on larval populations. From 2013 to 2015, spring larval populations had a negative relationship with the previous autumn % white clover with the relationship highly significant for the 2014 data. When CRW larval populations in spring 2013 to 2015 were predicted from the 2013 to 2015 autumn % white clover, respectively, based on their positive relationship in 2012, the predicted densities were substantially larger than those observed. Conversely, when 2015 spring larval data and % clover was regressed against 2012-2014 larval populations, observed densities tended to be higher than predicted, but the numbers came closer to predicted for the 2013 and 2014 populations. These differences are attributed to a CRW population decline that was not accounted by % white clover changes, the CR

What’s that bug? Community participation in biosecurity in Mount Maunganui, New Zealand

Biosecurity is essential to protect against the negative effects of non-native invasive species. As part of the government’s ‘Biosecurity 2025’ Initiative to enlist all New Zealanders as biosecurity risk managers, Tauranga Moana has been named the ‘biosecurity capital’ of New Zealand. The initiative will involve large-scale citizen science, for reporting and management of pest and disease threats. In this context we measured baseline awareness, perceptions and behaviour around biosecurity among two key groups of respondents, the local community at Mount Maunganui (surrounding Tauranga’s port) and school children. An online survey was completed by 324 members of the local community, while 120 school children completed a survey about their biosecurity knowledge and behaviours after using a biosecurity education kit. Results indicate that while both groups report a relatively high level of understanding about the concept of biosecurity, and acknowledge it as extremely important, knowledge of current pest threats and correct biosecurity behaviours could be improved. Mount Maunganui community members rate their understanding of biosecurity as better than the average New Zealander, but are less likely to have taken regular biosecurity action in the past year. For school children, improved biosecurity efforts could be evidenced by more active pest monitoring, and greater discussion about biosecurity outside of school (e.g. with their family at home). Key enablers for achieving more impactful citizen science for biosecurity among these groups are targeted education, and practical advice about what they can do to help

Temperature and plant genotype alter alkaloid concentrations in ryegrass infected with an epichloё endophyte and this affects an insect herbivore.

Asexual Epichloё endophytes colonise agricultural forage grasses in a relationship which is mutually beneficial and provides the host plant with protection against herbivorous insects. The endophyte strain AR37 (Epichloё festucae var. lolii) produces epoxy-janthitrem alkaloids and is the only endophyte known to provide ryegrass with resistance against porina larvae (Wiseana cervinata (Walker)), a major pasture pest in cooler areas of New Zealand. This study examined the effect of temperature on concentrations of epoxy-janthitrems in AR37-infected ryegrass and determined how the resulting variations in concentration affected consumption, growth and survival of porina larvae. Twenty replicate pairs of perennial (Lolium perenne L.) and Italian ryegrass (Lolium multiflorum Lam.) plants with and without endophyte were prepared by cloning, with one of each pair grown at either high (20°C) or low (7°C) temperature. After 10 weeks, herbage on each plant was harvested, divided into leaf and pseudostem, then freeze dried and ground. Leaf and pseudostem material was then incorporated separately into semi-synthetic diets which were fed to porina larvae in a bioassay over 3 weeks. Epoxy-janthitrem concentrations within the plant materials and the semi-synthetic diets were analysed by HPLC. AR37-infected ryegrass grown at high temperature contained high in planta concentrations of epoxy-janthitrem (30.6 µg/g in leaves and 83.9 µg/g in pseudostems) that had a strong anti-feedant effect on porina larvae when incorporated into their diets, reducing their survival by 25-42% on pseudostems. In comparison, in planta epoxy-janthitrem concentrations in AR37-infected ryegrass grown at low temperature were very low (0.67 µg/g in leaves and 7.4 µg/g in pseudostems) resulting in a small anti-feedant effect in perennial but not in Italian ryegrass. Although alkaloid concentrations were greatly reduced by low temperature this reduction did not occur until after 4 weeks of exposure. Alkaloid concentrations were slightly lower in Italian than in perennial ryegrass and concentrations were higher in the pseudostems when compared with the leaves. In conclusion, epoxy-janthitrems expressed by the AR37 endophyte show strong activity against porina larvae. However, when ryegrass plants are grown at a constant low temperature for an extended period of time in planta epoxy-janthitrem concentrations are greatly reduced and are les

Robust estimation of bacterial cell count from optical density

Optical density (OD) is widely used to estimate the density of cells in liquid culture, but cannot be compared between instruments without a standardized calibration protocol and is challenging to relate to actual cell count. We address this with an interlaboratory study comparing three simple, low-cost, and highly accessible OD calibration protocols across 244 laboratories, applied to eight strains of constitutive GFP-expressing E. coli. Based on our results, we recommend calibrating OD to estimated cell count using serial dilution of silica microspheres, which produces highly precise calibration (95.5% of residuals <1.2-fold), is easily assessed for quality control, also assesses instrument effective linear range, and can be combined with fluorescence calibration to obtain units of Molecules of Equivalent Fluorescein (MEFL) per cell, allowing direct comparison and data fusion with flow cytometry measurements: in our study, fluorescence per cell measurements showed only a 1.07-fold mean difference between plate reader and flow cytometry data

Statistical models for the long-term monitoring of songbird populations: a Bayesian analysis of constant effort sites and ring-recovery data

To underpin and improve advice given to government and other interested parties on the state of Britain’s common songbird populations, new models for analysing ecological data are developed in this thesis. These models use data from the British Trust for Ornithology’s Constant Effort Sites (CES) scheme, an annual bird-ringing programme in which catch effort is standardised. Data from the CES scheme are routinely used to index abundance and productivity, and to a lesser extent estimate adult survival rates. However, two features of the CES data that complicate analysis were previously inadequately addressed, namely the presence in the catch of “transient” birds not associated with the local population, and the sporadic failure in the constancy of effort assumption arising from the absence of within-year catch data. The current methodology is extended, with efficient Bayesian models developed for each of these demographic parameters that account for both of these data nuances, and from which reliable and usefully precise estimates are obtained. Of increasing interest is the relationship between abundance and the underlying vital rates, an understanding of which facilitates effective conservation. CES data are particularly amenable to an integrated approach to population modelling, providing a combination of demographic information from a single source. Such an integrated approach is developed here, employing Bayesian methodology and a simple population model to unite abundance, productivity and survival within a consistent framework. Independent data from ring-recoveries provide additional information on adult and juvenile survival rates. Specific advantages of this new integrated approach are identified, among which is the ability to determine juvenile survival accurately, disentangle the probabilities of survival and permanent emigration, and to obtain estimates of total seasonal productivity. The methodologies developed in this thesis are applied to CES data from Sedge Warbler, Acrocephalus schoenobaenus, and Reed Warbler, A. scirpaceus

Statistical models for the long-term monitoring of songbird populations : a Bayesian analysis of constant effort sites and ring-recovery data

To underpin and improve advice given to government and other interested parties on the state of Britain’s common songbird populations, new models for analysing ecological data are developed in this thesis. These models use data from the British Trust for Ornithology’s Constant Effort Sites (CES) scheme, an annual bird-ringing programme in which catch effort is standardised. Data from the CES scheme are routinely used to index abundance and productivity, and to a lesser extent estimate adult survival rates. However, two features of the CES data that complicate analysis were previously inadequately addressed, namely the presence in the catch of “transient” birds not associated with the local population, and the sporadic failure in the constancy of effort assumption arising from the absence of within-year catch data. The current methodology is extended, with efficient Bayesian models developed for each of these demographic parameters that account for both of these data nuances, and from which reliable and usefully precise estimates are obtained. Of increasing interest is the relationship between abundance and the underlying vital rates, an understanding of which facilitates effective conservation. CES data are particularly amenable to an integrated approach to population modelling, providing a combination of demographic information from a single source. Such an integrated approach is developed here, employing Bayesian methodology and a simple population model to unite abundance, productivity and survival within a consistent framework. Independent data from ring-recoveries provide additional information on adult and juvenile survival rates. Specific advantages of this new integrated approach are identified, among which is the ability to determine juvenile survival accurately, disentangle the probabilities of survival and permanent emigration, and to obtain estimates of total seasonal productivity. The methodologies developed in this thesis are applied to CES data from Sedge Warbler, Acrocephalus schoenobaenus, and Reed Warbler, A. scirpaceus.EThOS - Electronic Theses Online ServiceGBUnited Kingdo

Figure 5 from: Watts C, Thornburrow D, Stringer I, Cave V (2017) Population expansion by Cook Strait giant wētā, Deinacrida rugosa (Orthoptera: Anostostomatidae), following translocation to Matiu/Somes Island, New Zealand, and subsequent changes in abundance. Journal of Orthoptera Research 26: 171-180. https://doi.org/10.3897/jor.26.21712

Wētā, large wingless anostostomatid orthopterans, have been the most frequently translocated insects in New Zealand. Until recently, such translocations were only monitored intermittently to confirm presence. We investigate the spread of Cook Strait giant wētā (Deinacrida rugosa Buller, 1871) after its release on Matiu/Somes Island, Wellington, New Zealand, in 1996. Adult wētā were surveyed from 2008 to 2016 using footprint tracking tunnels and/or searching with spotlights at night. The population underwent a reversal in distributional abundance after 2008. In 2008, they were abundant in the north and rare in the south but by 2013 and 2015 they were relatively less abundant in the north and common in the south. Why they diminished in the north remains unknown but possible causes are predation on juvenile wētā by nocturnal geckos (detected in the north and east but not in the south), by some habitat change (mostly reduction of some lawn), or by a combination of these together with removal of wētā from the north for translocation elsewhere. Further research is required to confirm which of these factors affect wētā abundance, if there are other causes, and if any further change in distributional abundance occurs

Cow Lying Behaviour and Bedding Quality Changes during Five Weeks on a Stand-Off Pad

Bedding quality and cow lying time were measured during five weeks in a normal farm practice (NFP) off-paddock system with no bedding refreshment. Two groups of 100 non-lactating dairy cows were compared to groups of 8 cows with fresh bedding (FB). The cows were on a woodchip pad for 18 h/d at a space allowance of 5.4 m2/cow, with 6 h/d on pasture for 5 weeks. Lying times were recorded continuously for 60 cows per group using accelerometers. Bedding moisture content was measured weekly. Data for each NFP group were analysed and compared with those of their respective FB group using repeated measures. The lying time declined over five weeks from 11.6 h/day during the first week to 5.6 h/day during the fifth week (SED = 0.3; F1,25 = 351.56; p < 0.001). The moisture content of the bedding increased over the five weeks and was significantly higher for both NFP groups (NFP Group 1: F5,59 = 8.33; p < 0.001; NFP Group 2: F5,61 = 5.54; p < 0.001) than those of the respective FB groups. The percentage of total time lying when in the paddock increased for the NFP groups, reaching 15% in the last week of the trial. During five weeks on a stand-off pad, bedding quality deteriorated, and cows lay down less, to such an extent that welfare was compromised

Population expansion by Cook Strait giant wētā, Deinacrida rugosa (Orthoptera: Anostostomatidae), following translocation to Matiu/Somes Island, New Zealand, and subsequent changes in abundance

Wētā, large wingless anostostomatid orthopterans, have been the most frequently translocated insects in New Zealand. Until recently, such translocations were only monitored intermittently to confirm presence. We investigate the spread of Cook Strait giant wētā (Deinacrida rugosa Buller, 1871) after its release on Matiu/Somes Island, Wellington, New Zealand, in 1996. Adult wētā were surveyed from 2008 to 2016 using footprint tracking tunnels and/or searching with spotlights at night. The population underwent a reversal in distributional abundance after 2008. In 2008, they were abundant in the north and rare in the south but by 2013 and 2015 they were relatively less abundant in the north and common in the south. Why they diminished in the north remains unknown but possible causes are predation on juvenile wētā by nocturnal geckos (detected in the north and east but not in the south), by some habitat change (mostly reduction of some lawn), or by a combination of these together with removal of wētā from the north for translocation elsewhere. Further research is required to confirm which of these factors affect wētā abundance, if there are other causes, and if any further change in distributional abundance occurs