Pionic Atom Spectroscopy in the (d,3He) reaction at finite angles

We study the formation of deeply bound pionic atoms in the (d,3He) reactions theoretically and show the energy spectra of the emitted 3He at finite angles, which are expected to be observed experimentally. We find that the different combinations of the pion-bound and neutron-hole states dominate the spectra at different scattering angles because of the matching condition of the reaction. We conclude that the observation of the (d,3He) reaction at finite angles will provide the systematic information of the pionic bound states in each nucleus and will help to develop the study of the pion properties and the partial restoration of chiral symmetry in nuclei.Comment: 7 pages, 4 figures, 1 tabl

Evidence for DNA-mediated nuclear compartmentalization distinct from phase separation.

RNA Polymerase II (Pol II) and transcription factors form concentrated hubs in cells via multivalent protein-protein interactions, often mediated by proteins with intrinsically disordered regions. During Herpes Simplex Virus infection, viral replication compartments (RCs) efficiently enrich host Pol II into membraneless domains, reminiscent of liquid-liquid phase separation. Despite sharing several properties with phase-separated condensates, we show that RCs operate via a distinct mechanism wherein unrestricted nonspecific protein-DNA interactions efficiently outcompete host chromatin, profoundly influencing the way DNA-binding proteins explore RCs. We find that the viral genome remains largely nucleosome-free, and this increase in accessibility allows Pol II and other DNA-binding proteins to repeatedly visit nearby DNA binding sites. This anisotropic behavior creates local accumulations of protein factors despite their unrestricted diffusion across RC boundaries. Our results reveal underappreciated consequences of nonspecific DNA binding in shaping gene activity, and suggest additional roles for chromatin in modulating nuclear function and organization

Adaptive Genetic Algorithm for Crystal Structure Prediction

We present a genetic algorithm (GA) for structural search that combines the speed of structure exploration by classical potentials with the accuracy of density functional theory (DFT) calculations in an adaptive and iterative way. This strategy increases the efficiency of the DFT-based GA by several orders of magnitude. This gain allows considerable increase in size and complexity of systems that can be studied by first principles. The method's performance is illustrated by successful structure identifications of complex binary and ternary inter-metallic compounds with 36 and 54 atoms per cell, respectively. The discovery of a multi-TPa Mg-silicate phase with unit cell containing up to 56 atoms is also reported. Such phase is likely to be an essential component of terrestrial exoplanetary mantles.Comment: 14 pages, 4 figure

Combined wind profiler-weather radar observations of orographic rainband around Kyushu, Japan in the Baiu season

International audienceA special observation campaign (X-BAIU), using various instruments (wind profilers, C-band weather radars, X-band Doppler radars, rawinsondes, etc.), was carried out in Kyushu (western Japan) during the Baiu season, from 1998 to 2002. In the X-BAIU-99 and -02 observations, a line-shaped orographic rainband extending northeastward from the Koshikijima Islands appeared in the low-level strong wind with warm-moist airs. The weather radar observation indicated that the rainband was maintained for 11h. The maximum length and width of the rainband observed in 1999 was ~200km and ~20km, respectively. The rainband observed in 2002 was not so developed compared with the case in 1999. The Froude number averaged from sea level to the top of the Koshikijima Islands (~600m) was large (>1), and the lifting condensation level was below the tops of the Koshikijima Islands. Thus, it is suggested that the clouds organizing the rainband are formed by the triggering of the mountains on the airflow passing over them. The vertical profile of horizontal wind in/around the rainband was investigated in the wind profiler observations. In the downdraft region 60km from the Koshikijima Islands, strong wind and its clockwise rotation with increasing height was observed below 3km altitude. In addition, a strong wind component perpendicular to the rainband was observed when the rainband was well developed. These wind behaviors were related to the evolution of the rainband

SiO Emission in the Multi-Lobe Outflow associated with IRAS 16293-2422

We have mapped the thermal emission line of SiO (v = 0; J = 2-1) associated with the quadrupolar molecular outflow driven by the very cold far-infrared source IRAS 16293-2422. The SiO emission is significantly enhanced in the northeastern red lobe and at the position ~50" east of the IRAS source. Strong SiO emission observed at ~50" east of the IRAS source presents evidence for a dynamical interaction between a part of the eastern blue lobe and the dense ambient gas condensation, however, such an interaction is unlikely to be responsible for producing the quadrupolar morphology. The SiO emission in the northeastern red lobe shows the spatial and velocity structure similar to those of the CO outflow, suggesting that the SiO emission comes from the molecular outflow in the northeastern red lobe itself. The observed velocity structure is reproduced by a simple spatio-kinematic model of bow shock with a shock velocity of 19-24 km/s inclined by 30-45 deg from the plane of the sky. This implies that the northeastern red lobe is independent of the eastern blue lobe and that the quadrupolar structure is due to two separate bipolar outflows. The SiO emission observed in the western red lobe has a broad pedestal shape with low intensity. Unlike the SiO emission in the northeastern red lobe, the spatial extent of the SiO emission in the western red lobe is restricted to its central region. The spatial and velocity structures and the line profiles suggest that three different types of the SiO emission are observed in this outflow; the SiO emission arises from the interface between the outflowing gas and the dense ambient gas clump, the SiO emission coming from the outflow lobe itself, and the broad SiO emission with low intensity observed at the central region of the outflow lobe.Comment: 14 pages, 6 figures (figures 1 and 4 are color), gzipped tar file, To appear in the Ap