3,055 research outputs found
An Open Resource for Non-human Primate Imaging
Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets
Fine-Scale Spatial Organization of Face and Object Selectivity in the Temporal Lobe: Do Functional Magnetic Resonance Imaging, Optical Imaging, and Electrophysiology Agree?
The spatial organization of the brain's object and face representations in the temporal lobe is critical for understanding high-level vision and cognition but is poorly understood. Recently, exciting progress has been made using advanced imaging and physiology methods in humans and nonhuman primates, and the combination of such methods may be particularly powerful. Studies applying these methods help us to understand how neuronal activity, optical imaging, and functional magnetic resonance imaging signals are related within the temporal lobe, and to uncover the fine-grained and large-scale spatial organization of object and face representations in the primate brain
Cross-reactive neutralizing antibody response to enterovirus 71 infection in Taiwanese young children
Toll-like receptor 3 in Epstein-Barr virus-associated nasopharyngeal carcinomas: consistent expression and cytotoxic effects of its synthetic ligand poly(A:U) combined to a Smac-mimetic.
published_or_final_versio
Island dynamics and anisotropy during vapor phase epitaxy of m-plane GaN
Using in situ grazing-incidence x-ray scattering, we have measured the diffuse scattering from islands that form during layer-by-layer growth of GaN by metal-organic vapor phase epitaxy on the (101⎯⎯0)(101¯0)(101¯0) m-plane surface. The diffuse scattering is extended in the (0001)(0001)(0001) in-plane direction in reciprocal space, indicating a strong anisotropy with islands elongated along [12⎯⎯10][12¯10] [12¯10] and closely spaced along [0001][0001][0001]. This is confirmed by atomic force microscopy of a quenched sample. Islands were characterized as a function of growth rate F and temperature. The island spacing along [0001][0001][0001] observed during the growth of the first monolayer obeys a power-law dependence on growth rate F−nF−nF−n, with an exponent n=0.25±0.02n=0.25±0.02n=0.25±0.02. The results are in agreement with recent kinetic Monte Carlo simulations, indicating that elongated islands result from the dominant anisotropy in step edge energy and not from surface diffusion anisotropy. The observed power-law exponent can be explained using a simple steady-state model, which gives n = 1/4
Energetics and atomic mechanisms of dislocation nucleation in strained epitaxial layers
We study numerically the energetics and atomic mechanisms of misfit
dislocation nucleation and stress relaxation in a two-dimensional atomistic
model of strained epitaxial layers on a substrate with lattice misfit.
Relaxation processes from coherent to incoherent states for different
transition paths are studied using interatomic potentials of Lennard-Jones type
and a systematic saddle point and transition path search method. The method is
based on a combination of repulsive potential minimization and the Nudged
Elastic Band method. For a final state with a single misfit dislocation, the
minimum energy path and the corresponding activation barrier are obtained for
different misfits and interatomic potentials. We find that the energy barrier
decreases strongly with misfit. In contrast to continuous elastic theory, a
strong tensile-compressive asymmetry is observed. This asymmetry can be
understood as manifestation of asymmetry between repulsive and attractive
branches of pair potential and it is found to depend sensitively on the form of
the potential.Comment: 11 pages, 9 figures, to appear in Phys. Rev.
Telomerase activation in nasopharyngeal carcinomas.
Nasopharyngeal carcinomas (NPC) are common in Hong Kong and southern China but rare in Western countries. Telomerase activation is common in human cancers but has not been reported previously in NPC. Telomerase activation in NPC was determined using the sensitive TRAP (telomerase rapid amplification protocol) assay in 45 nasopharyngeal biopsies (36 NPC, nine normal nasopharyngeal mucosae) in four xenografted NPC tumours established in nude mice and in five in vitro NPC cell lines. Telomerase activation is common in NPC and can be detected at high frequencies (85% in primary tumours and 100% in recurrent tumours). The frequency of telomerase activation was lowest in NPC biopsies without lymph node involvement (60%) compared with those with positive lymph node involvement (100%), and the difference is statistically significant (P < 0.05; Fisher exact test). All the xenografted NPC tumours and in vitro NPC cell lines were strongly positive for telomerase activity. Our results suggest that telomerase activation is common in NPC and it may be useful as a diagnostic marker in the detection of tumour cells in nasopharyngeal biopsies. The high frequency of telomerase activation in stage I NPC (80% positive) suggests that it is an early event in tumour progression
Boojums and the Shapes of Domains in Monolayer Films
Domains in Langmuir monolayers support a texture that is the two-dimensional
version of the feature known as a boojum. Such a texture has a quantifiable
effect on the shape of the domain with which it is associated. The most
noticeable consequence is a cusp-like feature on the domain boundary. We report
the results of an experimental and theoretical investigation of the shape of a
domain in a Langmuir monolayer. A further aspect of the investigation is the
study of the shape of a ``bubble'' of gas-like phase in such a monolayer. This
structure supports a texture having the form of an inverse boojum. The
distortion of a bubble resulting from this texture is also studied. The
correspondence between theory and experiment, while not perfect, indicates that
a qualitative understanding of the relationship between textures and domain
shapes has been achieved.Comment: replaced with published version, 10 pages, 13 figures include
Measuring kinetic coefficients by molecular dynamics simulation of zone melting
Molecular dynamics simulations are performed to measure the kinetic
coefficient at the solid-liquid interface in pure gold. Results are obtained
for the (111), (100) and (110) orientations. Both Au(100) and Au(110) are in
reasonable agreement with the law proposed for collision-limited growth. For
Au(111), stacking fault domains form, as first reported by Burke, Broughton and
Gilmer [J. Chem. Phys. {\bf 89}, 1030 (1988)]. The consequence on the kinetics
of this interface is dramatic: the measured kinetic coefficient is three times
smaller than that predicted by collision-limited growth. Finally,
crystallization and melting are found to be always asymmetrical but here again
the effect is much more pronounced for the (111) orientation.Comment: 8 pages, 9 figures (for fig. 8 : [email protected]). Accepted for
publication in Phys. Rev.
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