392 research outputs found

    An Efficient Approach of Review Sentiment Analysis

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    This paper investigates the utility of linguistic feature for detecting the sentiments of review messages. We take a supervised approach to the problem and 50,000 movie reviews for building our training data. We investigate an efficient method to build a strong model for extracting the features that contain sentimental information

    Quantifying cancer epithelial-mesenchymal plasticity and its association with stemness and immune response

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    Cancer cells can acquire a spectrum of stable hybrid epithelial/mesenchymal (E/M) states during epithelial-mesenchymal transition (EMT). Cells in these hybrid E/M phenotypes often combine epithelial and mesenchymal features and tend to migrate collectively commonly as small clusters. Such collectively migrating cancer cells play a pivotal role in seeding metastases and their presence in cancer patients indicates an adverse prognostic factor. Moreover, cancer cells in hybrid E/M phenotypes tend to be more associated with stemness which endows them with tumor-initiation ability and therapy resistance. Most recently, cells undergoing EMT have been shown to promote immune suppression for better survival. A systematic understanding of the emergence of hybrid E/M phenotypes and the connection of EMT with stemness and immune suppression would contribute to more effective therapeutic strategies. In this review, we first discuss recent efforts combining theoretical and experimental approaches to elucidate mechanisms underlying EMT multi-stability (i.e. the existence of multiple stable phenotypes during EMT) and the properties of hybrid E/M phenotypes. Following we discuss non-cell-autonomous regulation of EMT by cell cooperation and extracellular matrix. Afterwards, we discuss various metrics that can be used to quantify EMT spectrum. We further describe possible mechanisms underlying the formation of clusters of circulating tumor cells. Last but not least, we summarize recent systems biology analysis of the role of EMT in the acquisition of stemness and immune suppression.Comment: 50 pages, 6 figure

    Analysis of hierarchical organization in gene expression networks reveals underlying principles of collective tumor cell dissemination and metastatic aggressiveness of inflammatory breast cancer

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    Clusters of circulating tumor cells (CTCs), although rare, may account for more than 95% of metastases. Inflammatory breast cancer (IBC) is a highly aggressive subtype that chiefly metastasizes via CTC clusters. Theory suggests that physical systems with hierarchical organization tend to be more adaptable due to their ability to efficiently span the set of available states. We used the cophenetic correlation coefficient (CCC) to quantify the hierarchical organization in the expression of collective dissemination associated and IBC associated genes, and found that the CCC of both gene sets was higher in (a) epithelial cell lines as compared to mesenchymal cell lines and (b) IBC tumor samples as compared to non-IBC breast cancer samples. A higher CCC of both networks was also correlated with a higher rate of metastatic relapse in breast cancer patients. Gene set enrichment analysis could not provide similar insights, indicating that the CCC provides additional information regarding the organizational complexity of gene expression. These results suggest that retention of epithelial traits in disseminating tumor cells as IBC progresses promotes successful metastasis and the CCC may be a prognostic factor for IBC.Comment: 38 pages, 13 figure

    Design and Implementation of an Innovative Internet of Things (IOT) based Smart Energy Meter

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    Energy meter is very essential measuring instrument for measuring the power in domestic, industrial etc. environment. Correct and appropriate measuring of power without any error is important in order to calculate the total power consumption and then for tariff calculation. In view of this, in this paper design and implementation on an innovative smart energy meter is proposed. The proposed smart energy meter is based on Internet of Things (IoT) applications. The paper describes its design along with its working

    Epithelial/mesenchymal plasticity: how have quantitative mathematical models helped improve our understanding?

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    Phenotypic plasticity, the ability of cells to reversibly alter their phenotypes in response to signals, presents a significant clinical challenge to treating solid tumors. Tumor cells utilize phenotypic plasticity to evade therapies, metastasize, and colonize distant organs. As a result, phenotypic plasticity can accelerate tumor progression. A well-studied example of phenotypic plasticity is the bidirectional conversions among epithelial, mesenchymal, and hybrid epithelial/mesenchymal (E/M) phenotype(s). These conversions can alter a repertoire of cellular traits associated with multiple hallmarks of cancer, such as metabolism, immune evasion, invasion, and metastasis. To tackle the complexity and heterogeneity of these transitions, mathematical models have been developed that seek to capture the experimentally verified molecular mechanisms and act as ‘hypothesis-generating machines’. Here, we discuss how these quantitative mathematical models have helped us explain existing experimental data, guided further experiments, and provided an improved conceptual framework for understanding how multiple intracellular and extracellular signals can drive E/M plasticity at both the single-cell and population levels. We also discuss the implications of this plasticity in driving multiple aggressive facets of tumor progression

    A Comprehensive Review of Smart Energy Meters: An Innovative Approach

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    Energy meter is an important device used for measuring the power. It is used in customers� homes, industries etc. for measuring the electrical power. A lot of modifications and development has taken place in the construction and operation of the energy meters over a decade. In view of above this paper presents a review of the development of the energy meters and their applications. Energy meters and its different types along with the innovation in this field is been discussed in this paper

    Internet of Things (IoT): Research, Architectures and Applications

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    Internet of Things is the concept of connecting any device (so long as it has an on/off switch) to the Internet and to other connected devices. The IoT is a giant network of connected things and people, all of which collect and share data about the way they are used and about the environment around them. Experts estimate that the IoT will consist of about 30 billion objects by 2020. This paper presents a study based on IoT and its applications in different field of science and technology. Along with the introduction of the IoT literature review is also provided. The paper also discusses the architecture and elements of the IoT along with its different applications

    Knowledge, attitudes, and practices related to antibiotic use in Paschim Bardhaman District: A survey of healthcare providers in West Bengal, India

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    IntroductionAntibiotic misuse is widespread and contributes to antibiotic resistance, especially in less regulated health systems such as India. Although informal providers are involved with substantial segments of primary healthcare, their level of knowledge, attitudes, and practices is not well documented in the literature.ObjectivesThis quantitative study systematically examines the knowledge, attitudes, and practices of informal and formal providers with respect to antibiotic use.MethodsWe surveyed a convenience sample of 384 participants (96 allopathic doctors, 96 nurses, 96 informal providers, and 96 pharmacy shopkeepers) over a period of 8 weeks from December to February using a validated questionnaire developed in Italy. Our team created an equivalent, composite KAP score for each respondent in the survey, which was subsequently compared between providers. We then performed a multivariate logistic regression analysis to estimate the odds of having a low composite score (ResultsDoctors scored highest in questions assessing knowledge (77.3%) and attitudes (87.3%), but performed poorly in practices (67.6%). Many doctors knew that antibiotics were not indicated for viral infections, but over 87% (n = 82) reported prescribing them in this situation. Nurses, pharmacy shopkeepers, and informal providers were more likely to perform poorly on the survey compared to allopathic doctors (OR: 10.4, 95% CI 5.4, 20.0, pConclusionsOur findings indicate poor knowledge and awareness of antibiotic use and functions among informal health providers, and dissonance between knowledge and practices among allopathic doctors. The nexus between allopathic doctors, pharmaceutical company representatives, and informal health providers present promising avenues for future research and intervention

    Distinguishing mechanisms underlying EMT tristability

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    Abstract Background The Epithelial-Mesenchymal Transition (EMT) endows epithelial-looking cells with enhanced migratory ability during embryonic development and tissue repair. EMT can also be co-opted by cancer cells to acquire metastatic potential and drug-resistance. Recent research has argued that epithelial (E) cells can undergo either a partial EMT to attain a hybrid epithelial/mesenchymal (E/M) phenotype that typically displays collective migration, or a complete EMT to adopt a mesenchymal (M) phenotype that shows individual migration. The core EMT regulatory network - miR-34/SNAIL/miR-200/ZEB1 - has been identified by various studies, but how this network regulates the transitions among the E, E/M, and M phenotypes remains controversial. Two major mathematical models – ternary chimera switch (TCS) and cascading bistable switches (CBS) - that both focus on the miR-34/SNAIL/miR-200/ZEB1 network, have been proposed to elucidate the EMT dynamics, but a detailed analysis of how well either or both of these two models can capture recent experimental observations about EMT dynamics remains to be done. Results Here, via an integrated experimental and theoretical approach, we first show that both these two models can be used to understand the two-step transition of EMT - E→E/M→M, the different responses of SNAIL and ZEB1 to exogenous TGF-β and the irreversibility of complete EMT. Next, we present new experimental results that tend to discriminate between these two models. We show that ZEB1 is present at intermediate levels in the hybrid E/M H1975 cells, and that in HMLE cells, overexpression of SNAIL is not sufficient to initiate EMT in the absence of ZEB1 and FOXC2. Conclusions These experimental results argue in favor of the TCS model proposing that miR-200/ZEB1 behaves as a three-way decision-making switch enabling transitions among the E, hybrid E/M and M phenotypes
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