150 research outputs found

    Realistic On-the-fly Outcomes of Planetary Collisions: Machine Learning Applied to Simulations of Giant Impacts

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    Planet formation simulations are capable of directly integrating the evolution of hundreds to thousands of planetary embryos and planetesimals as they accrete pairwise to become planets. In principle, these investigations allow us to better understand the final configuration and geochemistry of the terrestrial planets, and also to place our solar system in the context of other exosolar systems. While these simulations classically prescribe collisions to result in perfect mergers, recent computational advances have begun to allow for more complex outcomes to be implemented. Here we apply machine learning to a large but sparse database of giant impact studies, which allows us to streamline the simulations into a classifier of collision outcomes and a regressor of accretion efficiency. The classifier maps a four-dimensional (4D) parameter space (target mass, projectile-to-target mass ratio, impact velocity, impact angle) into the four major collision types: merger, graze-and-merge, hit-and-run, and disruption. The definition of the four regimes and their boundary is fully data-driven. The results do not suffer from any model assumption in the fitting. The classifier maps the structure of the parameter space and it provides insights into the outcome regimes. The regressor is a neural network that is trained to closely mimic the functional relationship between the 4D space of collision parameters, and a real-variable outcome, the mass of the largest remnant. This work is a prototype of a more complete surrogate model, that will be based on extended sets of simulations (big data), that will quickly and reliably predict specific collision outcomes for use in realistic N-body dynamical studies of planetary formation.NASA Planetary Science Division; University of ArizonaThis item from the UA Faculty Publications collection is made available by the University of Arizona with support from the University of Arizona Libraries. If you have questions, please contact us at [email protected]

    A New Database of Giant Impacts over a Wide Range of Masses and with Material Strength: A First Analysis of Outcomes

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    In the late stage of terrestrial planet formation, planets are predicted to undergo pairwise collisions known as giant impacts. Here we present a high-resolution database of giant impacts for differentiated colliding bodies of iron-silicate composition, with target masses ranging from 10^-4 M_Earth up to super-Earths (5 M_Earth). We vary impactor-to-target mass ratio, core-mantle (iron-silicate) fraction, impact velocity, and impact angle. Strength in the form of friction is included in all simulations. We find that due to strength, collisions with bodies smaller than about 2*10^-3 M_Earth can result in irregular shapes, compound core structures, and captured binaries. We observe that the characteristic escaping velocity of smaller remnants (debris) is approximately half of the impact velocity, significantly faster than currently assumed in N-body simulations of planet formation. Incorporating these results in N-body planet formation studies would provide more realistic debris-debris and debris-planet interactions.Comment: Accepted for publication in PSJ; Table 2 is available in full in an ancillary fil

    Rate of torque development and striatal shape in individuals with prodromal Huntington\u27s disease

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    The aim of the present study was to quantify explosive joint torque or the ability to develop joint torque rapidly, typically measured as the rate of torque development, in individuals with prodromal Huntington’s disease and healthy controls and its associations with measures of disease burden and striatal pathology. Twenty prodromal Huntington’s disease and 19 healthy control individuals volunteered for this study. Plantar flexor isometric rate of torque development values were evaluated using isokinetic dynamometry. Pathological changes in striatal shape were evaluated using magnetic resonance imaging. Disease burden was evaluated using the disease burden score and cytosine-adenine-guanine age product score. No statistical differences in the rate of torque development were observed between individuals with prodromal Huntington’s disease and healthy controls. However, significant associations were observed between the rate of torque development values and measures of disease burden (r = −0.42 to −0.69) and striatal pathology (r = 0.71–0.60) in individuals with prodromal Huntington’s disease. We found significant associations between lower rate of torque development values and greater striatal shape deflation and disease burden and striatal pathology in individuals with prodromal Huntington’s disease. While no significant differences in the rate of torque development were found between prodromal Huntington’s disease and healthy controls, the noted associations suggest that differences may emerge as the disease advances, which should be investigated longitudinally in future studies

    Single-Photon Atomic Cooling

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    We report the cooling of an atomic ensemble with light, where each atom scatters only a single photon on average. This is a general method that does not require a cycling transition and can be applied to atoms or molecules which are magnetically trapped. We discuss the application of this new approach to the cooling of hydrogenic atoms for the purpose of precision spectroscopy and fundamental tests.Comment: 4 pages and 3 figure

    The Effect of Inefficient Accretion on Planetary Differentiation

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    Pairwise collisions between terrestrial embryos are the dominant means of accretion during the last stage of planet formation. Hence, their realistic treatment in N-body studies is critical to accurately model the formation of terrestrial planets and to develop interpretations of telescopic and spacecraft observations. In this work, we compare the effects of two collision prescriptions on the core-mantle differentiation of terrestrial planets: a model in which collisions are always completely accretionary (``perfect merging'') and a more realistic model based on neural networks that has been trained on hydrodynamical simulations of giant impacts. The latter model is able to predict the loss of mass due to imperfect accretion and the evolution of non-accreted projectiles in hit-and-run collisions. We find that the results of the neural-network model feature a wider range of final core mass fractions and metal-silicate equilibration pressures, temperatures, and oxygen fugacities than the assumption of perfect merging. When used to model collisions in N-body studies of terrestrial planet formation, the two models provide similar answers for planets more massive than 0.1 Earth's masses. For less massive final bodies, however, the inefficient-accretion model predicts a higher degree of compositional diversity. This phenomenon is not reflected in planet formation models of the solar system that use perfect merging to determine collisional outcomes. Our findings confirm the role of giant impacts as important drivers of planetary diversity and encourage a realistic implementation of inefficient accretion in future accretion studies.Comment: 21 pages, 2 tables, 7 figures. Published open access on PSJ: https://iopscience.iop.org/article/10.3847/PSJ/abf0a

    Realistic On-the-fly Outcomes of Planetary Collisions II: Bringing Machine Learning to N-body Simulations

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    Terrestrial planet formation theory is at a bottleneck, with the growing realization that pairwise collisions are treated far too simply. Here, and in our companion paper (Cambioni et al. 2019) that introduces the training methodology, we demonstrate the first application of machine learning to more realistically model the late stage of planet formation by giant impacts. We present surrogate models that give fast, reliable answers for the masses and velocities of the two largest remnants of a giant impact, as a function of the colliding masses and their impact velocity and angle, with the caveat that our training data do not yet include pre-impact rotation or variable thermal conditions. We compare canonical N-body scenarios of terrestrial planet formation assuming perfect merger (Chambers 2001) with our more realistic treatment that includes inefficient accretions and hit-and-run collisions. The result is a protracted tail of final events lasting ~200 Myr, and the conversion of about half the mass of the initial population to debris. We obtain profoundly different solar system architectures, featuring a much wider range of terrestrial planet masses and enhanced compositional diversity.Comment: 20 pages, 10 figures, 3 tables; accepted for publication in ApJ; Table 1 is available in full in an ancillary file; the code developed in this work is available at https://github.com/aemsenhuber/collresolv

    Prospective trial of sacroiliac joint fusion using 3D-printed Triangular titanium implants

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    Background: Prior trials provide strong evidence supporting minimally invasive sacroiliac joint (SIJ) fusion using triangular titanium implants (TTI) for chronic SIJ dysfunction. Objective: To assess the safety and effectiveness of SIJF using a 3D-printed TTI. Methods: Fifty-one subjects with carefully diagnosed SIJ dysfunction underwent SIJF with 3D TTI. Subjects completed pain, disability and quality of life questionnaires at baseline and 3, 6 and 12 months postoperatively. Functional tests were performed in the clinic at each visit. Pelvic CT scans were independently evaluated for radiolucency, bridging bone and other endpoints. Results: Ninety percent had 12-month follow-up. Dysfunction due to pain (Oswestry Disability Index [ODI]) decreased from 52.8 at baseline to 27.9 at 12 months (p\u3c.0001 for change, p=.004 for non-inferiority primary hypothesis). SIJ pain scores improved from 78 preoperatively to 21 at 12-month follow-up (P\u3c.0001). Ninety-six percent experienced an improvement of 20 points or more in VAS SIJ pain by month 12. The percentage of subjects reporting minimal difficulty performing physical activities typically impaired by back/SIJ pain improved significantly for all activities. The proportion of subjects taking opioids for SIJ pain decreased from 57% to 22%. Three physical function tests improved markedly from baseline to 1 year. Positive radiographic findings were observed, including a 70% and 77% rate of bone bridging observed at 6 and 12 months, respectively. There was no evidence of device breakage, migration or subsidence. Conclusion: In this prospective multicenter trial, SIJF with 3D-printed TTI markedly improved pain, disability and quality of life. Results are consistent with 3 prior prospective multicenter trials of a milled implant but suggest accelerated bony fusion with the newer implant. Physical function improved, and high rates of opioid cessation were observed. Level of Evidence: Level II

    Genome modeling system: A knowledge management platform for genomics

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    In this work, we present the Genome Modeling System (GMS), an analysis information management system capable of executing automated genome analysis pipelines at a massive scale. The GMS framework provides detailed tracking of samples and data coupled with reliable and repeatable analysis pipelines. The GMS also serves as a platform for bioinformatics development, allowing a large team to collaborate on data analysis, or an individual researcher to leverage the work of others effectively within its data management system. Rather than separating ad-hoc analysis from rigorous, reproducible pipelines, the GMS promotes systematic integration between the two. As a demonstration of the GMS, we performed an integrated analysis of whole genome, exome and transcriptome sequencing data from a breast cancer cell line (HCC1395) and matched lymphoblastoid line (HCC1395BL). These data are available for users to test the software, complete tutorials and develop novel GMS pipeline configurations. The GMS is available at https://github.com/genome/gms

    Range Expansion Drives Dispersal Evolution In An Equatorial Three-Species Symbiosis

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    A-09-14International audienceBackground Recurrent climatic oscillations have produced dramatic changes in species distributions. This process has been proposed to be a major evolutionary force, shaping many life history traits of species, and to govern global patterns of biodiversity at different scales. During range expansions selection may favor the evolution of higher dispersal, and symbiotic interactions may be affected. It has been argued that a weakness of climate fluctuation-driven range dynamics at equatorial latitudes has facilitated the persistence there of more specialized species and interactions. However, how much the biology and ecology of species is changed by range dynamics has seldom been investigated, particularly in equatorial regions. Methodology/Principal Findings We studied a three-species symbiosis endemic to coastal equatorial rainforests in Cameroon, where the impact of range dynamics is supposed to be limited, comprised of two species-specific obligate mutualists –an ant-plant and its protective ant– and a species-specific ant parasite of this mutualism. We combined analyses of within-species genetic diversity and of phenotypic variation in a transect at the southern range limit of this ant-plant system. All three species present congruent genetic signatures of recent gradual southward expansion, a result compatible with available regional paleoclimatic data. As predicted, this expansion has been accompanied by the evolution of more dispersive traits in the two ant species. In contrast, we detected no evidence of change in lifetime reproductive strategy in the tree, nor in its investment in food resources provided to its symbiotic ants. Conclusions/Significance Despite the decreasing investment in protective workers and the increasing investment in dispersing females by both the mutualistic and the parasitic ant species, there was no evidence of destabilization of the symbiosis at the colonization front. To our knowledge, we provide here the first evidence at equatorial latitudes that biological traits associated with dispersal are affected by the range expansion dynamics of a set of interacting species
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