15 research outputs found
Spanning four mechanistic regions of intramolecular proton-coupled electron transfer in a Ru(bpy)3(2+)-tyrosine complex
Proton-coupled electron transfer (PCET) from tyrosine (TyrOH) to a covalently linked [Ru(bpy)(3)](2+) photosensitizer in aqueous media has been systematically reinvestigated by laser flash-quench kinetics as a model system for PCET in radical enzymes and in photochemical energy conversion. Previous kinetic studies on Ru-TyrOH molecules (Sjödin et al. J. Am. Chem. Soc. 2000, 122, 3932; Irebo et al. J. Am. Chem. Soc. 2007, 129, 15462) have established two mechanisms. Concerted electron-proton (CEP) transfer has been observed when pH 10. Here we compare the PCET rates and kinetic isotope effects (k(H)/k(D)) of four Ru-TyrOH molecules with varying Ru(III/II) oxidant strengths over a pH range of 1-12.5. On the basis of these data, two additional mechanistic regimes were observed and identified through analysis of kinetic competition and kinetic isotope effects (KIE): (i) a mechanism dominating at low pH assigned to a stepwise electron-first PCET and (ii) a stepwise proton-first PCET with OH(-) as proton acceptor that dominates around pH = 10. The effect of solution pH and electrochemical potential of the Ru(III/II) oxidant on the competition between the different mechanisms is discussed. The systems investigated may serve as models for the mechanistic diversity of PCET reactions in general with water (H(2)O, OH(-)) as primary proton acceptor
Probing Quantum and Dynamic Effects in Concerted ProtonâElectron Transfer Reactions of PhenolâBase Compounds
The oxidation of three phenols, which contain an intramolecular hydrogen bond to a pendent pyridine or amine group, has been shown, in a previous experimental study, to undergo concerted protonâelectron transfer (CPET). In this reaction, the electron is transferred to an outer-sphere oxidant, and the proton is transferred from the oxygen to nitrogen atom. In the present study, this reaction is studied computationally using a version of Hammes-Schifferâs multistate continuum theory where CPET is formulated as a transmission frequency between neutral and cation vibrational-electronic states. The neutral and cation proton vibrational wave functions are computed from one-dimensional potential energy surfaces (PESs) for the transferring proton in a fixed heavy atom framework. The overlap integrals for these neutral/cation wave functions, considering several initial (i.e., neutral) and final (i.e., cation) vibrational states, are used to evaluate the relative rates of oxidation. The analysis is extended to heavy atom configurations with various proton donorâacceptor (i.e., OâN) distances to assess the importance of heavy atom âgatingâ. Such changes in <i>d</i><sub>ON</sub> dramatically affect the nature of the proton PESs and wave functions. Surprisingly, the most reactive configurations have similar donorâacceptor distances despite the large (âŒ0.2 Ă
) differences in the optimized structures. These theoretical results qualitatively reproduce the experimental faster reactivity of the reaction of the pyridyl derivative <b>1</b> versus the CH<sub>2</sub>âpyridyl <b>2</b>, but the computed factor of 5 is smaller than the experimental 10<sup>2</sup>. The amine derivative is calculated to react similarly to <b>1</b>, which does not agree with the experiments, likely due to some of the simplifying assumptions made in applying the theory. The computed kinetic isotope effects (KIEs) and their temperature dependence are in agreement with experimental results
Proton-coupled electron transfer in a series of ruthenium-linked tyrosines with internal bases:Evaluation of a tunneling model for experimental temperature-dependent kinetics
Photoinitiated proton-coupled electron transfer (PCET) kinetics has been investigated in a series of four modified tyrosines linked to a ruthenium photosensitizer in acetonitrile, with each tyrosine bearing an internal hydrogen bond to a covalently linked pyridine or benzimidazole base. After correcting for differences in driving force, it is found that the intrinsic PCET rate constant still varies by 2 orders of magnitude. The differences in rates, as well as the magnitude of the kinetic isotope effect (KIE = k(H)/k(D)), both generally correlate with DFT calculated proton donor-acceptor distances. An Arrhenius analysis of temperature dependent data shows that the difference in reactivity arises primarily from differences in activation energies. We use this kinetic data to evaluate a commonly employed theoretical model for proton tunneling which includes a harmonic distribution of proton donor-acceptor distances due to vibrational motions of the molecule: Applying this model to the experimental data yields the conclusion that donor-acceptor compression is more facile in the Compounds with shorter PT distance; however, this is contrary to independent calculations for the same compounds. This discrepancy is likely because the assumption in the model of Morse-shaped proton potential energy surfaces is inappropriate for (strongly) hydrogen-bonded systems. These results question the general applicability of this, model. The results also suggest that a correlation of rate vs proton tunneling distance for the series of compounds is complicated by a concomitant variation of other relevant parameters
Isolating the Effects of the Proton Tunneling Distance on Proton-Coupled Electron Transfer in a Series of Homologous Tyrosine-Base Model Compounds
The
distance dependence of concerted proton-coupled electron transfer
(PCET) reactions was probed in a series of three new compounds, where
a phenol is covalently bridged by a 5, 6, or 7 membered carbocycle
to the quinoline. The carbocycle bridge enforces the change in distance
between the phenol oxygen (proton donor) and quinoline nitrogen (proton
acceptor), <i>d</i><sub>O···N</sub>, giving
rise to values ranging from 2.567 to 2.8487 Ă
, and resulting
in calculated proton tunneling distances, <i>r</i><sub>0</sub>, that span 0.719 to 1.244 Ă
. Not only does this series significantly
extend the range of distances that has been previously accessible
for experimental distance dependent PCET studies of synthetic model
compounds, but it also greatly improves the isolation of <i>d</i><sub>O···N</sub> as a variable compared to earlier
reports. Rates of PCET were determined by time-resolved optical spectroscopy
with flash-quench generated [RuÂ(bpy)<sub>3</sub>]<sup>3+</sup> and
[RuÂ(dce)<sub>3</sub>]<sup>3+</sup>, where bpy = 2,2âČ-bipyridyl
and dce = 4,4âČ-dicarboxyethylester-2,2âČ-bipyridyl. The
rates increased as <i>d</i><sub>O···N</sub> decreased, as can be expected from a static proton tunneling model.
An exponential attenuation of the PCET rate constant was found: <i>k</i><sub>PCET</sub>(<i>d</i>) = <i>k</i><sup>0</sup><sub>PCET</sub>expÂ[âÎČÂ(<i>d</i> â <i>d</i><sub>0</sub>)], with ÎČ âŒ
10 Ă
<sup>â1</sup>. The observed kinetic isotope effect
(KIE = <i>k</i><sub>H</sub>/<i>k</i><sub>D</sub>) ranged from 1.2 to 1.4, where the KIE was observed to <i>decrease</i> slightly with increasing <i>d</i><sub>O···N</sub>. Both ÎČ and KIE values are significantly smaller than what
is predicted by a static proton tunneling model. We conclude that
vibrational compression of the tunneling distances, as well as higher
vibronic transitions, that contribute to concerted proton coupled
electron transfer must also be considered
Spanning Four Mechanistic Regions of Intramolecular Proton-Coupled Electron Transfer in a Ru(bpy)<sub>3</sub><sup>2+</sup>âTyrosine Complex
Proton-coupled electron transfer (PCET) from tyrosine
(TyrOH) to
a covalently linked [RuÂ(bpy)<sub>3</sub>]<sup>2+</sup> photosensitizer
in aqueous media has been systematically reinvestigated by laser flash-quench
kinetics as a model system for PCET in radical enzymes and in photochemical
energy conversion. Previous kinetic studies on RuâTyrOH molecules
(SjoÌdin et al. <i>J. Am. Chem. Soc.</i> <b>2000</b>, <i>122</i>, 3932; Irebo et al. <i>J. Am. Chem. Soc.</i> <b>2007</b>, <i>129</i>, 15462) have established two mechanisms.
Concerted electronâproton (CEP) transfer has been observed
when pH < p<i>K</i><sub>a</sub>(TyrOH), which is pH-dependent
but not first-order in [OH<sup>â</sup>] and not dependent on
the buffer concentration when it is sufficiently low (less than ca.
5 mM). In addition, the pH-independent rate constant for electron
transfer from tyrosine phenolate (TyrO<sup>â</sup>) was reported
at pH >10. Here we compare the PCET rates and kinetic isotope effects
(<i>k</i><sub>H</sub>/<i>k</i><sub>D</sub>) of
four RuâTyrOH molecules with varying Ru<sup>III/II</sup> oxidant
strengths over a pH range of 1â12.5. On the basis of these
data, two additional mechanistic regimes were observed and identified
through analysis of kinetic competition and kinetic isotope effects
(KIE): (i) a mechanism dominating at low pH assigned to a stepwise
electron-first PCET and (ii) a stepwise proton-first PCET with OH<sup>â</sup> as proton acceptor that dominates around pH = 10.
The effect of solution pH and electrochemical potential of the Ru<sup>III/II</sup> oxidant on the competition between the different mechanisms
is discussed. The systems investigated may serve as models for the
mechanistic diversity of PCET reactions in general with water (H<sub>2</sub>O, OH<sup>â</sup>) as primary proton acceptor
Effect of Basic Site Substituents on Concerted ProtonâElectron Transfer in Hydrogen-Bonded PyridylâPhenols
Separated concerted protonâelectron transfer (sCPET)
reactions
of two series of phenols with pendent substituted pyridyl moieties
are described. The pyridine is either attached directly to the phenol
(<b>HOAr-pyX</b>) or connected through a methylene linker (<b>HOArCH</b><sub><b>2</b></sub><b>pyX</b>) (X = 4-NO<sub>2</sub>, 5-CF<sub>3</sub>, 4-CH<sub>3</sub>, and 4-NMe<sub>2</sub>). Electron-donating and -withdrawing substituents have a substantial
effect on the chemical environment of the transferring proton, as
indicated by IR and <sup>1</sup>H NMR spectra, X-ray structures, and
computational studies. One-electron oxidation of the phenols occurs
concomitantly with proton transfer from the phenolic oxygen to the
pyridyl nitrogen. The oxidation potentials vary linearly with the
p<i>K</i><sub>a</sub> of the free pyridine (pyX), with slopes
slightly below the Nerstian value of 59 mV/p<i>K</i><sub>a</sub>. For the <b>HOArCH</b><sub><b>2</b></sub><b>pyX</b> series, the rate constants <i>k</i><sub>sCPET</sub> for oxidation by NAr<sub>3</sub><sup>âą+</sup> or [FeÂ(diimine)<sub>3</sub>]<sup>3+</sup> vary primarily with the thermodynamic driving
force (Î<i>G</i>°<sub>sCPET</sub>), whether Î<i>G</i>° is changed by varying the potential of the oxidant
or the substituent on the pyridine, indicating a constant intrinsic
barrier λ. In contrast, the substituents in the <b>HOAr-pyX</b> series affect λ as well as Î<i>G</i>°<sub>sCPET</sub>, and compounds with electron-withdrawing substituents
have significantly lower reactivity. The relationship between the
structural and spectroscopic properties of the phenols and their CPET
reactivity is discussed
Effect of Basic Site Substituents on Concerted ProtonâElectron Transfer in Hydrogen-Bonded PyridylâPhenols
Separated concerted protonâelectron transfer (sCPET)
reactions
of two series of phenols with pendent substituted pyridyl moieties
are described. The pyridine is either attached directly to the phenol
(<b>HOAr-pyX</b>) or connected through a methylene linker (<b>HOArCH</b><sub><b>2</b></sub><b>pyX</b>) (X = 4-NO<sub>2</sub>, 5-CF<sub>3</sub>, 4-CH<sub>3</sub>, and 4-NMe<sub>2</sub>). Electron-donating and -withdrawing substituents have a substantial
effect on the chemical environment of the transferring proton, as
indicated by IR and <sup>1</sup>H NMR spectra, X-ray structures, and
computational studies. One-electron oxidation of the phenols occurs
concomitantly with proton transfer from the phenolic oxygen to the
pyridyl nitrogen. The oxidation potentials vary linearly with the
p<i>K</i><sub>a</sub> of the free pyridine (pyX), with slopes
slightly below the Nerstian value of 59 mV/p<i>K</i><sub>a</sub>. For the <b>HOArCH</b><sub><b>2</b></sub><b>pyX</b> series, the rate constants <i>k</i><sub>sCPET</sub> for oxidation by NAr<sub>3</sub><sup>âą+</sup> or [FeÂ(diimine)<sub>3</sub>]<sup>3+</sup> vary primarily with the thermodynamic driving
force (Î<i>G</i>°<sub>sCPET</sub>), whether Î<i>G</i>° is changed by varying the potential of the oxidant
or the substituent on the pyridine, indicating a constant intrinsic
barrier λ. In contrast, the substituents in the <b>HOAr-pyX</b> series affect λ as well as Î<i>G</i>°<sub>sCPET</sub>, and compounds with electron-withdrawing substituents
have significantly lower reactivity. The relationship between the
structural and spectroscopic properties of the phenols and their CPET
reactivity is discussed