One dimensional chain of quantum molecule motors as a mathematical physics model for muscle fibre

A quantum chain model of many molecule motors is proposed as a mathematical physics theory on the microscopic modeling of classical force-velocity relation and tension transients of muscle fibre. We proposed quantum many-particle Hamiltonian to predict the force-velocity relation for the slow release of muscle fibre which has no empirical relation yet, it is much more complicate than hyperbolic relation. Using the same Hamiltonian, we predicted the mathematical force-velocity relation when the muscle is stimulated by alternative electric current. The discrepancy between input electric frequency and the muscle oscillation frequency has a physical understanding by Doppler effect in this quantum chain model. Further more, we apply quantum physics phenomena to explore the tension time course of cardiac muscle and insect flight muscle. Most of the experimental tension transients curves found their correspondence in the theoretical output of quantum two-level and three-level model. Mathematically modeling electric stimulus as photons exciting a quantum three-level particle reproduced most tension transient curves of water bug Lethocerus Maximus.Comment: 16 pages, 12 figures, Arguments are adde

L1599B: Cloud Envelope and C+ Emission in a Region of Moderately Enhanced Radiation Field

We study the effects of an asymmetric radiation field on the properties of a molecular cloud envelope. We employ observations of carbon monoxide (12CO and 13CO), atomic carbon, ionized carbon, and atomic hydrogen to analyze the chemical and physical properties of the core and envelope of L1599B, a molecular cloud forming a portion of the ring at approximately 27 pc from the star Lambda Ori. The O III star provides an asymmetric radiation field that produces a moderate enhancement of the external radiation field. Observations of the [CII] fine structure line with the GREAT instrument on SOFIA indicate a significant enhanced emission on the side of the cloud facing the star, while the [Ci], 12CO and 13CO J = 1-0 and 2-1, and 12CO J = 3-2 data from the PMO and APEX telescopes suggest a relatively typical cloud interior. The atomic, ionic, and molecular line centroid velocities track each other very closely, and indicate that the cloud may be undergoing differential radial motion. The HI data from the Arecibo GALFA survey and the SOFIA/GREAT [CII] data do not suggest any systematic motion of the halo gas, relative to the dense central portion of the cloud traced by 12CO and 13CO.Comment: 9 Figure

Binding to medium and long chain fatty acyls is a common property of HEAT and ARM repeat modules.

Covalent post-translational modification (PTM) of proteins with acyl groups of various carbon chain-lengths regulates diverse biological processes ranging from chromatin dynamics to subcellular localization. While the YEATS domain has been found to be a prominent reader of acetylation and other short acyl modifications, whether additional acyl-lysine reader domains exist, particularly for longer carbon chains, is unclear. Here, we employed a quantitative proteomic approach using various modified peptide baits to identify reader proteins of various acyl modifications. We discovered that proteins harboring HEAT and ARM repeats bind to lysine myristoylated peptides. Recombinant HEAT and ARM repeats bind to myristoylated peptides independent of the peptide sequence or the position of the myristoyl group. Indeed, HEAT and ARM repeats bind directly to medium- and long-chain free fatty acids (MCFA and LCFA). Lipidomic experiments suggest that MCFAs and LCFAs interact with HEAT and ARM repeat proteins in mammalian cells. Finally, treatment of cells with exogenous MCFAs and inhibitors of MCFA-CoA synthases increase the transactivation activity of the ARM repeat protein β-catenin. Taken together, our results suggest an unappreciated role for fatty acids in the regulation of proteins harboring HEAT or ARM repeats

Effect of isoprene emissions from major forests on ozone formation in the city of Shanghai, China

Ambient surface level concentrations of isoprene (C<sub>5</sub>H<sub>8</sub>) were measured in the major forest regions located south of Shanghai, China. Because there is a large coverage of broad-leaved trees in this region, high concentrations of isoprene were measured, ranging from 1 to 6 ppbv. A regional dynamical/chemical model (WRF-Chem) is applied for studying the effect of such high concentrations of isoprene on the ozone production in the city of Shanghai. The evaluation of the model shows that the calculated isoprene concentrations agree with the measured concentrations when the measured isoprene concentrations are lower than 3 ppb, but underestimate the measurements when the measured values are higher than 3 ppb. Isoprene was underestimated only at sampling sites near large bamboo plantations, a high isoprene source, indicating the need to include geospatially resolved bamboo distributions in the biogenic emission model. The assessment of the impact of isoprene on ozone formation suggests that the concentrations of peroxy radicals (RO<sub>2</sub>) are significantly enhanced due to the oxidation of isoprene, with a maximum of 30 ppt. However, the enhancement of RO<sub>2</sub> is confined to the forested regions. Because the concentrations of NO<sub>x</sub> were low in the forest regions, the ozone production due to the oxidation of isoprene (C<sub>5</sub>H<sub>8</sub> + OH → → RO<sub>2</sub> + NO → → O<sub>3</sub>) is low (less than 2–3 ppb h<sup>−1</sup>). The calculation further suggests that the oxidation of isoprene leads to the enhancement of carbonyls (such as formaldehyde and acetaldehyde) in the regions downwind of the forests, due to continuous oxidation of isoprene in the forest air. As a result, the concentrations of HO<sub>2</sub> radical are enhanced, resulting from the photo-disassociation of formaldehyde and acetaldehyde. Because the enhancement of HO<sub>2</sub> radical occurs in regions downwind of the forests, the enhancement of ozone production (6–8 ppb h<sup>−1</sup>) is higher than in the forest region, causing by higher anthropogenic emissions of NO<sub>x</sub>. This study suggests that the biogenic emissions in the major forests to the south of Shanghai have important impacts on the levels of ozone in the city, mainly due to the carbonyls produced by the continuous oxidation of isoprene in the forest air

Global gene expression under nitrogen starvation in Xylella fastidiosa: contribution of the σ54 regulon

<p>Abstract</p> <p>Background</p> <p><it>Xylella fastidiosa</it>, a Gram-negative fastidious bacterium, grows in the xylem of several plants causing diseases such as citrus variegated chlorosis. As the xylem sap contains low concentrations of amino acids and other compounds, <it>X. fastidiosa </it>needs to cope with nitrogen limitation in its natural habitat.</p> <p>Results</p> <p>In this work, we performed a whole-genome microarray analysis of the <it>X. fastidiosa </it>nitrogen starvation response. A time course experiment (2, 8 and 12 hours) of cultures grown in defined medium under nitrogen starvation revealed many differentially expressed genes, such as those related to transport, nitrogen assimilation, amino acid biosynthesis, transcriptional regulation, and many genes encoding hypothetical proteins. In addition, a decrease in the expression levels of many genes involved in carbon metabolism and energy generation pathways was also observed. Comparison of gene expression profiles between the wild type strain and the <it>rpoN </it>null mutant allowed the identification of genes directly or indirectly induced by nitrogen starvation in a σ⁵⁴-dependent manner. A more complete picture of the σ⁵⁴regulon was achieved by combining the transcriptome data with an <it>in silico </it>search for potential σ⁵⁴-dependent promoters, using a position weight matrix approach. One of these σ⁵⁴-predicted binding sites, located upstream of the <it>glnA </it>gene (encoding glutamine synthetase), was validated by primer extension assays, confirming that this gene has a σ⁵⁴-dependent promoter.</p> <p>Conclusions</p> <p>Together, these results show that nitrogen starvation causes intense changes in the <it>X. fastidiosa </it>transcriptome and some of these differentially expressed genes belong to the σ⁵⁴regulon.</p

High-capacity quantum secure direct communication based on quantum hyperdense coding with hyperentanglement

We present a quantum hyperdense coding protocol with hyperentanglement in polarization and spatial-mode degrees of freedom of photons first and then give the details for a quantum secure direct communication (QSDC) protocol based on this quantum hyperdense coding protocol. This QSDC protocol has the advantage of having a higher capacity than the quantum communication protocols with a qubit system. Compared with the QSDC protocol based on superdense coding with $d$-dimensional systems, this QSDC protocol is more feasible as the preparation of a high-dimension quantum system is more difficult than that of a two-level quantum system at present.Comment: 5 pages, 2 figur

Antioxidant defenses and biochemical changes in pacu in response to single and combined copper and hypercapnia exposure.

This study investigate the pontentially detrimental effects of CO2 and its combination with copper on pacu

Stocking density and copper effects on the antioxidant defenses and hematological paramenters of pacu.

In this study the objectives were to determine the acute toxicity of copper in pacu and the influence of fish stocking densities to copper toxicity