Ozone for post-harvest treatment of apple fruits

Different biotic contaminations can affect apple production. Among these, infections by Penicillium expansum, the causal agent of blue-green post-harvest rot and patulin production, is particularly important. Fruit of the apple varieties: ‘Royal Gala’, ‘Golden Delicious’ and ‘Fuji’ were challenged with a patulin-producing P. expansum strain and stored at 1 ± 1°C in presence of gaseous ozone at 0.5 μL L-1 for 2 months. During the storage period, fungal populations, the biosynthesis of patulin and the activity of some Pathogenesis Related Proteins (glucanase, peroxidase and phenylalanine ammonia-lyase) were evaluated. Ozone treatment reduced fungal populations and patulin production. The activity of the assayed enzymes was not directly or clearly correlated with the inhibiting effect of ozone. These results indicate that ozone could be used to increase storage duration of apple varieties to maintain their quality

Evaluation of Drought Characteristics in Iraq using SC-PDSI

Evaluation of drought characteristics in Iraq by analysis annual growing season of Self-Calibrating Palmer Drought Severity Index (SC-PDSI) for three climatic zones using run theory method. The efficiency of SC-PDSI for drought monitoring was examined from compared with Rainfall Departure from the mean (RD) for three zones (Arid and Semi-Arid, Steppes and Desert) for the period 1981-2015, were derived from Climatic Research Unit (CRU). The spatial interpolation techniques in ArcGIS package has been used, to cover the whole extent of country and extracting the zones. Statistical methods were applied to compute the probability of drought events at every zone. The results showed the years 1999, 2000, 2008 and 2009 experienced droughts in all zones except the desert zone where was experienced severe drought in 2012, while the years 1982 and 1988 experienced received precipitation above-average in all zones. The values of standard deviation of precipitation were compared with precipitation anomalies for each zone, the drier seasons are (2007-2008) and (1998-1999) in all Zones. The wetter seasons are (1987-1988) in Arid and Semi-Arid and Steppes zone, (1994-1995) and (1997-1998) are wetter seasons in Desert zone. Using run theory, the steppes zone have experienced more severe droughts than other zones evaluated in this study and the most susceptible areas to dry spell are steppes and Arid and Semi-Arid Zones during study period. While the desert zone experienced less droughts

Development of Real-Time Isothermal Amplification Assays for On-Site Detection of Phytophthora infestans in Potato Leaves

Real-time loop-mediated isothermal amplification (LAMP) and recombinase polymerase amplification (RPA) assays were developed targeting the internal transcribed spacer 2 region of the ribosomal DNA of Phytophthora infestans, the potato late blight causal agent. A rapid crude plant extract (CPE) preparation method from infected potato leaves was developed for on-site testing. The assay's specificity was tested using several species of Phytophthora and other potato fungal and oomycete pathogens. Both LAMP and RPA assays showed specificity to P. infestans but also to the closely related species P. andina, P. mirabilis, P. phaseoli, and P. ipomoeae, although the latter are not reported as potato pathogen species. No cross-reaction occurred with P. capsici or with the potato pathogens tested, including P. nicotianae and P. erythroseptica. The sensitivity was determined using P. infestans pure genomic DNA added into healthy CPE samples. Both LAMP and RPA assays detected DNA at 50 fg/μl and were insensitive to CPE inhibition. The isothermal assays were tested with artificially inoculated and naturally infected potato plants using a Smart-DART platform. The LAMP assay effectively detected P. infestans in symptomless potato leaves as soon as 24 h postinoculation. A rapid and accurate on-site detection of P. infestans in plant material using the LAMP assay will contribute to improved late blight diagnosis and early detection of infections and facilitate prompt management decisions

Phytophthora nicotianae is the predominant Phytophthora species in citrus nurseries in Egypt

Phytophthora root rot is considered to be the most destructive disease to citrus production in Egypt. Phytophthora species are generally present in citrus nurseries, where soil pots containing the survival propagules are considered responsible for their spread into new orchards. The goal of this study was to investigate the distribution and seasonal variation of Phytophthora species in soil and feeder roots in two Egyptian citrus nurseries, characterized by different management, and to identify Phytophthora species associated with root rot. Soil and root samples were collected at monthly intervals from Sour orange and Volkameriana lemon rootstocks during March-July period. The inoculum density of Phytophthora species, and the percentage of infected feeder roots, were estimated using the plate dilution method in conjunction with selective media. Phytophthora isolates were identified according to their morphological characteristics and on the basis of the ITS regions of the rDNA. Phytophthora nicotianae was the predominant isolated species, followed by P. citrophthora and P. palmivora. Phytophthora nicotianae was detected in both nurseries, while P. citrophthora and P. palmivora were recovered only in one nursery. Inoculum density of Phytophthora species fluctuated during spring and summer according to the environmental conditions, rootstock, and nursery management practices

Identification of three potential insect vectors of Xylella fastidiosa in southern Italy

6openInternationalInternational coauthor/editorIn order to identify potential vectors of Xylella fastidiosa in olive orchards in Puglia (southern Italy), Hemiptera insects were collected from October to December, 2013, in olive orchards with high incidences of X. fastidiosa associated with “rapid decline” symptoms. The study focused on species in the Auchenorrhyncha (sharpshooter leafhoppers and froghoppers or spittlebugs), a group that includes known vectors of X. fastidiosa. Adults of three species, i.e. Philaenus spumarius L. (Aphrophoridae), Neophilaenus campestris Fallén (Aphrophoridae) and Euscelis lineolatus Brullé (Cicadellidae) were captured, from which total DNA was extracted and assayed by PCR using three sets of specific primers designed for X. fastidiosa detection. Results of PCR showed that 38 out of a total of 84 tested insects were positive for X. fastidiosa, i.e. eight (of 20) P. spumarius, 14 (of 18) N. campestris and 16 (of 46) E. lineolatus. PCR amplicons of the RNA polymerase sigma-70 factor gene from six specimens (two of each insect species) were sequenced. The sequences obtained were 99.3‒99.4% identical. BlastN analyses demonstrated these sequences to be similar to those of X. fastidiosa isolates from olive OL-X and OL-G reported from Puglia, whereas they displayed distant molecular identity (always less than 98%) with X. fastidiosa subspecies from other countries. The detection of X. fastidiosa in P. spumarius and, for the first time, in N. campestris and E. lineolatus (which, unlike the others, is a phloem feeder), indicates potential vectoring roles of these insects for the spread of the bacterium in Puglia. Further investigations and specific infectivity trials are required to definitively determine the roles of these insects as effective vectors of this pathogen.openElbeaino, T.; Yaseen, T.; Valentini, F.; Moussa, I.E.B.; Mazzoni, V.; D'Onghia, A.M.Elbeaino, T.; Yaseen, T.; Valentini, F.; Moussa, I.E.B.; Mazzoni, V.; D'Onghia, A.M

Comparison of the performance of the main real-time and conventional PCR detection tests for ‘Candidatus Liberibacter’ spp., plant pathogenic bacteria causing the Huanglongbing disease in Citrus spp

23 Pág.Huanglongbing disease affects the Rutaceae family and is associated with three phloem-limited bacterium species: Candidatus Liberibacter asiaticus, africanus and americanus. These species are considered quarantine pathogens in the world, and pose major risks for citrus production and industry. Due to the low titer and the uneven distribution of the bacteria within its host plant, conventional PCR detection protocols can lead to false negative results, especially for early detection. Herein, three real-time PCR diagnostic methods recommended by the EPPO and FAO for asiaticus and africanus species detection were evaluated for their performance and compared with a conventional duplex PCR. Assessments were done as part of an international cooperative project under the EUPHRESCO guidance. Intra-laboratory assessment of the analytical specificity and analytical sensitivity was performed on 33 target or non-target DNA samples and seven target DNA samples were used to determine the sensitivity. Thereafter, repeatability, reproducibility, and concordance odds ratio were assessed on 20 target or non-target DNA samples through a collaborative test performance study organized among eight international laboratories. Results showed that the Li protocol proved to be the best method for asiaticus and africanus species detection, along with the conventional duplex PCR; whereas the Morgan protocol showed high performance only for asiaticus species. Interlaboratory reproducibility was high, suggesting that these real-time PCR methods can be readily transferred to diagnostic laboratories.This research was funded by Anses - Plant Health Laboratory (LSV).Peer reviewe