A dual output polarimeter devoted to the study of the Cosmic Microwave Background

We have developed a correlation radiometer at 33 GHz devoted to the search for residual polarization of the Cosmic Microwave Background (CMB). The two instruments`s outputs are linear combination of two Stokes Parameters (Q and U or U and V). The instrument is therefore directly sensitive to the polarized component of the radiation (respectively linear and circular). The radiometer has a beam-width oif 7 or 14 deg, but it can be coupled to a telescope increasing the resolution. The expected CMB polarization is at most a part per milion. The polarimeter has been designed to be sensitive to this faint signal, and it has been optimized to improve its long term stability, observing from the ground. In this contribution the performances of the instrument are presented, together with the preliminary test and observations.Comment: 12 pages, 6 figures, in print on the Proc. SPIE Conf. - August 200

Large-scale prediction and analysis of protein sub-mitochondrial localization with DeepMito

Background: The prediction of protein subcellular localization is a key step of the big effort towards protein functional annotation. Many computational methods exist to identify high-level protein subcellular compartments such as nucleus, cytoplasm or organelles. However, many organelles, like mitochondria, have their own internal compartmentalization. Knowing the precise location of a protein inside mitochondria is crucial for its accurate functional characterization. We recently developed DeepMito, a new method based on a 1-Dimensional Convolutional Neural Network (1D-CNN) architecture outperforming other similar approaches available in literature. Results: Here, we explore the adoption of DeepMito for the large-scale annotation of four sub-mitochondrial localizations on mitochondrial proteomes of five different species, including human, mouse, fly, yeast and Arabidopsis thaliana. A significant fraction of the proteins from these organisms lacked experimental information about sub-mitochondrial localization. We adopted DeepMito to fill the gap, providing complete characterization of protein localization at sub-mitochondrial level for each protein of the five proteomes. Moreover, we identified novel mitochondrial proteins fishing on the set of proteins lacking any subcellular localization annotation using available state-of-the-art subcellular localization predictors. We finally performed additional functional characterization of proteins predicted by DeepMito as localized into the four different sub-mitochondrial compartments using both available experimental and predicted GO terms. All data generated in this study were collected into a database called DeepMitoDB (available at http://busca.biocomp.unibo.it/deepmitodb), providing complete functional characterization of 4307 mitochondrial proteins from the five species. Conclusions: DeepMitoDB offers a comprehensive view of mitochondrial proteins, including experimental and predicted fine-grain sub-cellular localization and annotated and predicted functional annotations. The database complements other similar resources providing characterization of new proteins. Furthermore, it is also unique in including localization information at the sub-mitochondrial level. For this reason, we believe that DeepMitoDB can be a valuable resource for mitochondrial research

TRIS II: search for CMB spectral distortions at 0.60, 0.82 and 2.5 GHz

With the TRIS experiment we have performed absolute measurements of the sky brightness in a sky circle at $\delta = +42^{\circ}$ at the frequencies $\nu =$ 0.60, 0.82 and 2.5 GHz. In this paper we discuss the techniques used to separate the different contributions to the sky emission and give an evaluation of the absolute temperature of the Cosmic Microwave Background. For the black-body temperature of the CMB we get: $T_{cmb}^{th}=(2.837 \pm 0.129 \pm 0.066)K$ at $\nu=0.60$ GHz; $T_{cmb}^{th}=(2.803 \pm 0.051 ^{+0.430} _{-0.300})K$ at $\nu=0.82$ GHz; $T_{cmb}^{th}=(2.516 \pm 0.139 \pm 0.284)K$ at $\nu=2.5$ GHz. The first error bar is statistic (1$\sigma$) while the second one is systematic. These results represent a significant improvement with respect to the previous measurements. We have also set new limits to the free-free distortions, $-6.3 \times 10^{-6} < Y_{ff} < 12.6 \times 10^{-6}$, and slightly improved the Bose-Einstein upper limit, $|\mu| < 6 \times 10^{-5}$, both at 95% confidence level.Comment: accepted for publication in The Astrophysical Journa

TRIS I: Absolute Measurements of the Sky Brightness Temperature at 0.6, 0.82 and 2.5 GHz

At frequencies close to 1 GHz the sky diffuse radiation is a superposition of radiation of Galactic origin, the 3 K Relic or Cosmic Microwave Background Radiation, and the signal produced by unresolved extragalactic sources. Because of their different origin and space distribution the relative importance of the three components varies with frequency and depends on the direction of observation. With the aim of disentangling the components we built TRIS, a system of three radiometers, and studied the temperature of the sky at $\nu =0.6$, $\nu = 0.82$ and $\nu = 2.5$ GHz using geometrically scaled antennas with identical beams (HPBW = $18^{\circ} \times 23^{\circ}$). Observations included drift scans along a circle at constant declination $\delta=+42^{\circ}$ which provided the dependence of the sky signal on the Right Ascension, and absolute measurement of the sky temperature at selected points along the same scan circle. TRIS was installed at Campo Imperatore (lat. = $42^{\circ}~26'$ N, long.= $13^{\circ}~33'$, elevation = 2000 m a.s.l.) in Central Italy, close to the Gran Sasso Laboratory.Comment: Accepted for publication in The Astrophysical Journa

Search for distortions in the spectrum of the Cosmic Microwave Radiation

We present preliminary results of TRIS, an experiment dedicated to the search of deviations from a pure planckian distribution in the spectrum of the Cosmic Microwave Background at frequencies close to 1 GHzComment: 9 pages, in press on the Proc. of the 3rd Sakharov Conf. - Moscow 200

Implementation of a webGIS service platform for high mountain climate research: the SHARE GeoNetwork project

The implementation of a webGIS service platform dedicated to the management and sharing of climatological data acquired by high elevation stations is the core of the Station at High Altitude for Research on the Environment (SHARE) GeoNetwork project, promoted by the Ev-K2 CNR Committee. The web platform basically will provide three types of services: structured metadata archive, data and results from high-altitude environments research and projects; access to high-altitude Ev-K2 CNR stations and creation of a network of existing stations; dedicated webGIS for geo-referenced data collected during the research. High elevation environmental and territorial data and metadata are catalogued in a single integrated platform to get access to the information heritage of the SHARE project, using open-source tools: Geonetwork for the metadata catalogue and webGIS resources, and the open-source Weather and Water Database (WDB), developed by the Norwegian Meteorological Institute, for the database information system implementation. The information system is designed to have a main node, with the possibility to install relocated subsystems based on the same technology, named focal point of SHARE, which will contain metadata and data connected to the main node. In this study, a new structure of metadata for the description of the climatological stations is proposed and WDB adaptation and data preprocessing are described in detail, giving code and script samples

A template of atmospheric O2 circularly polarized emission for CMB experiments

We compute the circularly polarized signal from atmospheric molecular oxygen. Polarization of O2 rotational lines is caused by Zeeman effect in the Earth magnetic field. We evaluate the circularly polarized emission for various sites suitable for CMB measurements: South Pole and Dome C (Antarctica), Atacama (Chile) and Testa Grigia (Italy). An analysis of the polarized signal is presented and discussed in the framework of future CMB polarization experiments. We find a typical circularly polarized signal (V Stokes parameter) of ~ 50 - 300 {\mu}K at 90 GHz looking at the zenith. Among the other sites Atacama shows the lower polarized signal at the zenith. We present maps of this signal for the various sites and show typical elevation and azimuth scans. We find that Dome C presents the lowest gradient in polarized temperature: ~ 0.3 {\mu}K/\circ at 90 GHz. We also study the frequency bands of observation: around {\nu} \simeq 100 GHz and {\nu} \simeq 160 GHz we find the best conditions because the polarized signal vanishes. Finally we evaluate the accuracy of the templates and the signal variability in relation with the knowledge and the variability of the Earth magnetic field and the atmospheric parameters.Comment: 10 pages, 12 figures, accepted for publication on Mon. Not. R. Astron. So

TRIS III: the diffuse galactic radio emission at δ=+42∘\delta=+42^{\circ}

We present values of temperature and spectral index of the galactic diffuse radiation measured at 600 and 820 MHz along a 24 hours right ascension circle at declination $\delta = +42^{\circ}$. They have been obtained from a subset of absolute measurements of the sky temperature made with TRIS, an experiment devoted to the measurement of the Cosmic Microwave Background temperature at decimetric-wavelengths with an angular resolution of about $20^{\circ}$. Our analysis confirms the preexisting picture of the galactic diffuse emission at decimetric wavelength and improves the accuracy of the measurable quantities. In particular, the signal coming from the halo has a spectral index in the range $2.9-3.1$ above 600 MHz, depending on the sky position. In the disk, at TRIS angular resolution, the free-free emission accounts for the 11% of the overall signal at 600 MHz and 21% at 1420 MHz. The polarized component of the galactic emission, evaluated from the survey by Brouw and Spoelstra, affects the observations at TRIS angular resolution by less than 3% at 820 MHz and less than 2% at 600 MHz. Within the uncertainties, our determination of the galactic spectral index is practically unaffected by the correction for polarization. Since the overall error budget of the sky temperatures measured by TRIS at 600 MHz, that is 66 mK(systematic)$+$18 mK (statistical), is definitely smaller than those reported in previous measurements at the same frequency, our data have been used to discuss the zero levels of the sky maps at 150, 408, 820 and 1420 MHz in literature. Concerning the 408 MHz survey, limiting our attention to the patch of sky corresponding to the region observed by TRIS, we suggest a correction of the base-level of $(+3.9\pm 0.6)$K.Comment: Accepted for publication in the Astrophysical Journa