6,350 research outputs found
Ordering dynamics of the driven lattice gas model
The evolution of a two-dimensional driven lattice-gas model is studied on an
L_x X L_y lattice. Scaling arguments and extensive numerical simulations are
used to show that starting from random initial configuration the model evolves
via two stages: (a) an early stage in which alternating stripes of particles
and vacancies are formed along the direction y of the driving field, and (b) a
stripe coarsening stage, in which the number of stripes is reduced and their
average width increases. The number of stripes formed at the end of the first
stage is shown to be a function of L_x/L_y^\phi, with \phi ~ 0.2. Thus,
depending on this parameter, the resulting state could be either single or
multi striped. In the second, stripe coarsening stage, the coarsening time is
found to be proportional to L_y, becoming infinitely long in the thermodynamic
limit. This implies that the multi striped state is thermodynamically stable.
The results put previous studies of the model in a more general framework
Coarsening Dynamics of a One-Dimensional Driven Cahn-Hilliard System
We study the one-dimensional Cahn-Hilliard equation with an additional
driving term representing, say, the effect of gravity. We find that the driving
field has an asymmetric effect on the solution for a single stationary
domain wall (or `kink'), the direction of the field determining whether the
analytic solutions found by Leung [J.Stat.Phys.{\bf 61}, 345 (1990)] are
unique. The dynamics of a kink-antikink pair (`bubble') is then studied. The
behaviour of a bubble is dependent on the relative sizes of a characteristic
length scale , where is the driving field, and the separation, ,
of the interfaces. For the velocities of the interfaces are
negligible, while in the opposite limit a travelling-wave solution is found
with a velocity . For this latter case () a set of
reduced equations, describing the evolution of the domain lengths, is obtained
for a system with a large number of interfaces, and implies a characteristic
length scale growing as . Numerical results for the domain-size
distribution and structure factor confirm this behavior, and show that the
system exhibits dynamical scaling from very early times.Comment: 20 pages, revtex, 10 figures, submitted to Phys. Rev.
Kolmogorov's refined similarity hypothesis: consequences from an exact two-point equation for isotropic turbulence
In order to describe intermittency and anomalous scaling in turbulence,
Kolmogorov's second refined similarity hypothesis (KRSH) connects statistics of
velocity increments to those of the rate of dissipation , averaged
in a sphere at a scale in the inertial range. We explore this classic
hypothesis in light of the generalized Kolmogorov-Hill equation (GKHE) derived
exactly from the Navier-Stokes equations, and in which appears
explicitly. When evaluated using conditional averaging based on ,
analysis of Direct Numerical Simulations data at various Reynolds numbers shows
that the energy cascade rate indeed equals . Conditional
higher-order moments also support KRSH, while an ``inverse KRSH'' is not
supported by data. Finally, results confirm KRSH even when applied separately
to positive (forward) and negative (inverse) cascade regions of the flow
Phase Separation Kinetics in a Model with Order-Parameter Dependent Mobility
We present extensive results from 2-dimensional simulations of phase
separation kinetics in a model with order-parameter dependent mobility. We find
that the time-dependent structure factor exhibits dynamical scaling and the
scaling function is numerically indistinguishable from that for the
Cahn-Hilliard (CH) equation, even in the limit where surface diffusion is the
mechanism for domain growth. This supports the view that the scaling form of
the structure factor is "universal" and leads us to question the conventional
wisdom that an accurate representation of the scaled structure factor for the
CH equation can only be obtained from a theory which correctly models bulk
diffusion.Comment: To appear in PRE, figures available on reques
Observing two dark accelerators around the Galactic Centre with Fermi Large Area Telescope
We report the results from a detailed ray investigation in the field
of two "dark accelerators", HESS J1745-303 and HESS J1741-302, with years
of data obtained by the Fermi Large Area Telescope. For HESS J1745-303, we
found that its MeV-GeV emission is mainly originated from the "Region A" of the
TeV feature. Its ray spectrum can be modeled with a single power-law
with a photon index of from few hundreds MeV to TeV. Moreover,
an elongated feature, which extends from "Region A" toward northwest for
, is discovered for the first time. The orientation of this
feature is similar to that of a large scale atomic/molecular gas distribution.
For HESS J1741-302, our analysis does not yield any MeV-GeV counterpart for
this unidentified TeV source. On the other hand, we have detected a new point
source, Fermi J1740.1-3013, serendipitously. Its spectrum is apparently curved
which resembles that of a ray pulsar. This makes it possibly
associated with PSR B1737-20 or PSR J1739-3023.Comment: 11 pages, 7 figures, 2 tables, accepted for publication in MNRA
Fast Domain Growth through Density-Dependent Diffusion in a Driven Lattice Gas
We study electromigration in a driven diffusive lattice gas (DDLG) whose
continuous Monte Carlo dynamics generate higher particle mobility in areas with
lower particle density. At low vacancy concentrations and low temperatures,
vacancy domains tend to be faceted: the external driving force causes large
domains to move much more quickly than small ones, producing exponential domain
growth. At higher vacancy concentrations and temperatures, even small domains
have rough boundaries: velocity differences between domains are smaller, and
modest simulation times produce an average domain length scale which roughly
follows , where varies from near .55 at 50% filling
to near .75 at 70% filling. This growth is faster than the behavior
of a standard conserved order parameter Ising model. Some runs may be
approaching a scaling regime. At low fields and early times, fast growth is
delayed until the characteristic domain size reaches a crossover length which
follows . Rough numerical estimates give and simple theoretical arguments give . Our conclusion that
small driving forces can significantly enhance coarsening may be relevant to
the YBCuO electromigration experiments of Moeckly {\it et
al.}(Appl. Phys. Let., {\bf 64}, 1427 (1994)).Comment: 18 pages, RevTex3.
Coenzyme Q10 dose-escalation study in hemodialysis patients: safety, tolerability, and effect on oxidative stress.
BackgroundCoenzyme Q10 (CoQ10) supplementation improves mitochondrial coupling of respiration to oxidative phosphorylation, decreases superoxide production in endothelial cells, and may improve functional cardiac capacity in patients with congestive heart failure. There are no studies evaluating the safety, tolerability and efficacy of varying doses of CoQ10 in chronic hemodialysis patients, a population subject to increased oxidative stress.MethodsWe performed a dose escalation study to test the hypothesis that CoQ10 therapy is safe, well-tolerated, and improves biomarkers of oxidative stress in patients receiving hemodialysis therapy. Plasma concentrations of F2-isoprostanes and isofurans were measured to assess systemic oxidative stress and plasma CoQ10 concentrations were measured to determine dose, concentration and response relationships.ResultsFifteen of the 20 subjects completed the entire dose escalation sequence. Mean CoQ10 levels increased in a linear fashion from 704 ± 286 ng/mL at baseline to 4033 ± 1637 ng/mL, and plasma isofuran concentrations decreased from 141 ± 67.5 pg/mL at baseline to 72.2 ± 37.5 pg/mL at the completion of the study (P = 0.003 vs. baseline and P < 0.001 for the effect of dose escalation on isofurans). Plasma F2-isoprostane concentrations did not change during the study.ConclusionsCoQ10 supplementation at doses as high as 1800 mg per day was safe in all subjects and well-tolerated in most. Short-term daily CoQ10 supplementation decreased plasma isofuran concentrations in a dose dependent manner. CoQ10 supplementation may improve mitochondrial function and decrease oxidative stress in patients receiving hemodialysis.Trial registrationThis clinical trial was registered on clinicaltrials.gov [NCT00908297] on May 21, 2009
Experimental Line Parameters of the b^(1)Σ^(+)_g ← X^(3)Σ^(-)_g Band of Oxygen Isotopologues at 760 nm Using Frequency-Stabilized Cavity Ring-Down Spectroscopy
Positions, intensities, self-broadened widths, and collisional narrowing coefficients of the oxygen isotopologues ^(16)O^(18)O, ^(16)O^(17)O, ^(17)O^(18)O, and ^(18)O^(18)O have been measured for the b^(1)Σg + ← X^(3)Σg − (0,0) band using frequency-stabilized cavity ring-down spectroscopy. Line positions of 156 P-branch transitions were referenced against the hyperfine components of the ^(39)K D_1 (4s ^(2)S_(1/2) → 4p ^(2)P_(1/2)) and D_2 (4s ^(2)S_(1/2) → 4p ^(2)P_(3/2)) transitions, yielding precisions of ~0.00005 cm^(−1) and absolute accuracies of 0.00030 cm^(−1) or better. New excited b^(1)Σg + state molecular constants are reported for all four isotopologues. The measured line intensities of the ^(16)O^(18)O isotopologue are within 2% of the values currently assumed in molecular databases. However, the line intensities of the ^(16)O^(17)O isotopologue show a systematic, J-dependent offset between our results and the databases. Self-broadening half-widths for the various isotopologues are internally consistent to within 2%. This is the first comprehensive study of the line intensities and shapes for the ^(17)O^(18)O or ^(18)O_2 isotopologues of the b^(1)Σg + ← X^(3)Σg − (0,0) band of O_2. The ^(16)O_2, ^(16)O^(18)O, and ^(16)O^(17)O line parameters for the oxygen A-band have been extensively revised in the HITRAN 2008 database using results from the present study
The identification of mitochondrial DNA variants in glioblastoma multiforme
Background:
Mitochondrial DNA (mtDNA) encodes key proteins of the electron transfer chain (ETC), which produces ATP through oxidative phosphorylation (OXPHOS) and is essential for cells to perform specialised functions. Tumor-initiating cells use aerobic glycolysis, a combination of glycolysis and low levels of OXPHOS, to promote rapid cell proliferation and tumor growth. Glioblastoma multiforme (GBM) is an aggressively malignant brain tumor and mitochondria have been proposed to play a vital role in GBM tumorigenesis.
Results:
Using next generation sequencing and high resolution melt analysis, we identified a large number of mtDNA variants within coding and non-coding regions of GBM cell lines and predicted their disease-causing potential through in silico modeling. The frequency of variants was greatest in the D-loop and origin of light strand replication in non-coding regions. ND6 was the most susceptible coding gene to mutation whilst ND4 had the highest frequency of mutation. Both genes encode subunits of complex I of the ETC. These variants were not detected in unaffected brain samples and many have not been previously reported. Depletion of HSR-GBM1 cells to varying degrees of their mtDNA followed by transplantation into immunedeficient mice resulted in the repopulation of the same variants during tumorigenesis. Likewise, de novo variants identified in other GBM cell lines were also incorporated. Nevertheless, ND4 and ND6 were still the most affected genes. We confirmed the presence of these variants in high grade gliomas.
Conclusions:
These novel variants contribute to GBM by rendering the ETC. partially dysfunctional. This restricts metabolism to anaerobic glycolysis and promotes cell proliferation
O(^3P) +CO_2 Collisions at Hyperthermal Energies: Dynamics of Nonreactive Scattering, Oxygen Isotope Exchange, and Oxygen-Atom Abstraction
The dynamics of O(^3P) + CO_2 collisions at hyperthermal energies were investigated experimentally and theoretically. Crossed-molecular-beams experiments at Ecoll = 98.8 kcal mol^(–1) were performed with isotopically labeled ^(12)C^(18)O_2 to distinguish products of nonreactive scattering from those of reactive scattering. The following product channels were observed: elastic and inelastic scattering (^(16)O(^3P) + ^(12)C^(18)O^2), isotope exchange (^(18)O + ^(16)O^(12)C^(18)O), and oxygen-atom abstraction (^(18)O^(16)O + ^(12)C^(18)O). Stationary points on the two lowest triplet potential energy surfaces of the O(^3P) + CO_2 system were characterized at the CCSD(T)/aug-cc-pVTZ level of theory and by means of W4 theory, which represents an approximation to the relativistic basis set limit, full-configuration-interaction (FCI) energy. The calculations predict a planar CO_3(C_(2v),^3A″) intermediate that lies 16.3 kcal mol^(–1) (W4 FCI excluding zero point energy) above reactants and is approached by a C_(2v) transition state with energy 24.08 kcal mol^(–1). Quasi-classical trajectory (QCT) calculations with collision energies in the range 23–150 kcal mol^(–1) were performed at the B3LYP/6-311G(d) and BMK/6-311G(d) levels. Both reactive channels observed in the experiment were predicted by these calculations. In the isotope exchange reaction, the experimental center-of-mass (c.m.) angular distribution, T(θ_(c.m.)), of the ^(16)O^(12)C^(18)O products peaked along the initial CO_2 direction (backward relative to the direction of the reagent O atoms), with a smaller isotropic component. The product translational energy distribution, P(E_T), had a relatively low average of E_T = 35 kcal mol^(–1), indicating that the ^(16)O^(12)C^(18)O products were formed with substantial internal energy. The QCT calculations give c.m. P(E_T) and T(θ_(c.m.)) distributions and a relative product yield that agree qualitatively with the experimental results, and the trajectories indicate that exchange occurs through a short-lived CO_3^* intermediate. A low yield for the abstraction reaction was seen in both the experiment and the theory. Experimentally, a fast and weak ^(16)O^(18)O product signal from an abstraction reaction was observed, which could only be detected in the forward direction. A small number of QCT trajectories leading to abstraction were observed to occur primarily via a transient CO_3 intermediate, albeit only at high collision energies (149 kcal mol^(–1)). The oxygen isotope exchange mechanism for CO_2 in collisions with ground state O atoms is a newly discovered pathway through which oxygen isotopes may be cycled in the upper atmosphere, where O(^3P) atoms with hyperthermal translational energies can be generated by photodissociation of O_3 and O_2
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