RAD6-RAD18-RAD5-pathway-dependent tolerance to chronic low-dose ultraviolet light

In nature, organisms are exposed to chronic low- dose ultraviolet light ( CLUV) as opposed to the acute high doses common to laboratory experiments. Analysis of the cellular response to acute high-dose exposure has delineated the importance of direct DNA repair by the nucleotide excision repair pathway(1) and for checkpoint-induced cell cycle arrest in promoting cell survival(2). Here we examine the response of yeast cells to CLUV and identify a key role for the RAD6-RAD18-RAD5 error- free postreplication repair (RAD6 error-free PRR) pathway(3,4) in promoting cell growth and survival. We show that loss of the RAD6 error- free PRR pathway results in DNA-damage-checkpoint- induced G2 arrest in CLUV-exposed cells, whereas wild-type and nucleotide-excision-repair-deficient cells are largely unaffected. Cell cycle arrest in the absence of the RAD6 error- free PRR pathway was not caused by a repair defect or by the accumulation of ultraviolet-induced photoproducts. Notably, we observed increased replication protein A (RPA) and Rad52 - yellow fluorescent protein foci(5) in the CLUV- exposed rad18 Delta cells and demonstrated that Rad52- mediated homologous recombination is required for the viability of the rad18 Delta cells after release from CLUV- induced G2 arrest. These and other data presented suggest that, in response to environmental levels of ultraviolet exposure, the RAD6 error- free PRR pathway promotes replication of damaged templates without the generation of extensive single- stranded DNA regions. Thus, the error- free PRR pathway is specifically important during chronic low- dose ultraviolet exposure to prevent counter- productive DNA checkpoint activation and allow cells to proliferate normally

An atlas of CO2 storage potential in the nearshore waters of the Texas coast – American Recovery and Reinvestment Act – “Gulf of Mexico Miocene CO2 site characterization mega-transect”

Bureau of Economic Geolog

Stability criterion for self-similar solutions with a scalar field and those with a stiff fluid in general relativity

A stability criterion is derived in general relativity for self-similar solutions with a scalar field and those with a stiff fluid, which is a perfect fluid with the equation of state $P=\rho$. A wide class of self-similar solutions turn out to be unstable against kink mode perturbation. According to the criterion, the Evans-Coleman stiff-fluid solution is unstable and cannot be a critical solution for the spherical collapse of a stiff fluid if we allow sufficiently small discontinuity in the density gradient field in the initial data sets. The self-similar scalar-field solution, which was recently found numerically by Brady {\it et al.} (2002 {\it Class. Quantum. Grav.} {\bf 19} 6359), is also unstable. Both the flat Friedmann universe with a scalar field and that with a stiff fluid suffer from kink instability at the particle horizon scale.Comment: 15 pages, accepted for publication in Classical and Quantum Gravity, typos correcte

Convergence to a self-similar solution in general relativistic gravitational collapse

We study the spherical collapse of a perfect fluid with an equation of state $P=k\rho$ by full general relativistic numerical simulations. For 0, it has been known that there exists a general relativistic counterpart of the Larson-Penston self-similar Newtonian solution. The numerical simulations strongly suggest that, in the neighborhood of the center, generic collapse converges to this solution in an approach to a singularity and that self-similar solutions other than this solution, including a ``critical solution'' in the black hole critical behavior, are relevant only when the parameters which parametrize initial data are fine-tuned. This result is supported by a mode analysis on the pertinent self-similar solutions. Since a naked singularity forms in the general relativistic Larson-Penston solution for 0, this will be the most serious known counterexample against cosmic censorship. It also provides strong evidence for the self-similarity hypothesis in general relativistic gravitational collapse. The direct consequence is that critical phenomena will be observed in the collapse of isothermal gas in Newton gravity, and the critical exponent $\gamma$ will be given by $\gamma\approx 0.11$, though the order parameter cannot be the black hole mass.Comment: 22 pages, 15 figures, accepted for publication in Physical Review D, reference added, typos correcte

Primordial black holes as a tool for constraining non-Gaussianity

Primordial Black Holes (PBH's) can form in the early Universe from the collapse of large density fluctuations. Tight observational limits on their abundance constrain the amplitude of the primordial fluctuations on very small scales which can not otherwise be constrained, with PBH's only forming from the extremely rare large fluctuations. The number of PBH's formed is therefore sensitive to small changes in the shape of the tail of the fluctuation distribution, which itself depends on the amount of non-Gaussianity present. We study, for the first time, how quadratic and cubic local non-Gaussianity of arbitrary size (parameterised by f_nl and g_nl respectively) affects the PBH abundance and the resulting constraints on the amplitude of the fluctuations on very small scales. Intriguingly we find that even non-linearity parameters of order unity have a significant impact on the PBH abundance. The sign of the non-Gaussianity is particularly important, with the constraint on the allowed fluctuation amplitude tightening by an order of magnitude as f_nl changes from just -0.5 to 0.5. We find that if PBH's are observed in the future, then regardless of the amplitude of the fluctuations, non-negligible negative f_nl would be ruled out. Finally we show that g_nl can have an even larger effect on the number of PBH's formed than f_nl.Comment: 9 pages, 5 figures, v2: version to appear in Phys. Rev. D with minor changes, v3: typos corrected (including factor of 1/2 in erfc prefactor), no changes to result

African Water: Supporting African involvement in the EU Framework Programme.

Water researchers in developing countries have yet to take full advantage of the funding and collaborative research opportunities presented by the EU Framework Programme. There are a variety of reasons for this, such as insufficient information and a lack of previous experience. The African Water initiative aims to increase the involvement of African water researchers through a range of activities including communication and dissemination, capacity building and development, and complementary initiatives. The project has demonstrated that there is a demand for such sector-specific support activities. However, African Water is a small component of a much larger process of partnership between the developed and the less-developed countries of the world, involving many different European and African organisations working across political, institutional and technical domains, and complementing the wide range of actions already being undertaken

Multifocal High-Grade Pancreatic Precursor Lesions: A Case Series and Management Recommendations

Background: The risk of developing invasive cancer in the remnant pancreas after resection of multifocal high-grade pancreatic precursor lesions is not well known. We report three patients who were followed up after resection of multifocal high-grade pancreatic intraepithelial neoplasia (PanIN)-3 or intraductal papillary mucinous neoplasia (IPMN), two of whom eventually developed invasive carcinoma. Presentation: 1) 68-year-old woman who had a laparoscopic distal pancreatectomy for multifocal mixed-type IPMN, identified as high-grade on final pathology, with negative surgical margins. During semiannual monitoring, eight years from the first surgery, the patient developed suspicious features prompting surgical resection of the body with final pathology revealing invasive ductal adenocarcinoma in the setting of IPMN. 2) 48-year-old woman who had a distal pancreatectomy for severe acute/chronic symptomatic pancreatitis, with final pathology revealing multifocal high-grade PanIN-3, with negative surgical margins. Despite semiannual monitoring, two years from the first surgery, the patient developed pancreatic adenocarcinoma with liver metastasis. 3) 55-year-old woman who had a Whipple procedure for symptomatic chronic pancreatitis, with multifocal PanIN-3 on final pathology. The patient underwent completion pancreatectomy due to symptomatology and her high-risk profile, with final pathology confirming multifocal PanIN-3. Conclusion: Multifocal high-grade dysplastic lesions of the pancreas might benefit from surgical resection

Uniqueness of Self-Similar Asymptotically Friedmann-Robertson-Walker Spacetime in Brans-Dicke theory

We investigate spherically symmetric self-similar solutions in Brans-Dicke theory. Assuming a perfect fluid with the equation of state $p=(\gamma-1)\mu (1 \le \gamma<2)$, we show that there are no non-trivial solutions which approach asymptotically to the flat Friedmann-Robertson-Walker spacetime if the energy density is positive. This result suggests that primordial black holes in Brans-Dicke theory cannot grow at the same rate as the size of the cosmological particle horizon.Comment: Revised version, 4 pages, no figures, Revtex, accepted for publication in Physical Review

Homothetic Self-Similar Solutions of the Three-Dimensional Brans-Dicke Gravity

All homothetic self-similar solutions of the Brans-Dicke scalar field in three-dimensional spacetime with circular symmetry are found in closed form.Comment: latex, five pages, without figur

Bound and resonance states of the nonlinear Schroedinger equation in simple model systems

The stationary nonlinear Schroedinger equation, or Gross-Pitaevskii equation, is studied for the cases of a single delta potential and a delta-shell potential. These model systems allow analytical solutions, and thus provide useful insight into the features of stationary bound, scattering and resonance states of the nonlinear Schroedinger equation. For the single delta potential, the influence of the potential strength and the nonlinearity is studied as well as the transition from bound to scattering states. Furthermore, the properties of resonance states for a repulsive delta-shell potential are discussed.Comment: 19 pages, 10 figure