The gene order on Human Chromosome 15 and Chicken Chromosome 10 reveal multiple inter- and intrachromosomal rearrangements

Comparative mapping between the human and chicken genomes has revealed a striking conservation of synteny between the genomes of these two species, but the results have been based on low-resolution comparative maps. To address this conserved synteny in much more detail, a high-resolution human-chicken comparative map was constructed from human chromosome 15. Mapping, sequencing, and ordering of specific chicken bacterial artificial chromosomes has improved the comparative map of chromosome 15 (Hsa15) and the homologous regions in chicken with almost 100 new genes and/or expressed sequence tags. A comparison of Hsa15 with chicken identified seven conserved chromosomal segments between the two species. In chicken, these were on chromosome 1 (Gga1; two segments), Gga5 (two segments), and Gga10 (three segments). Although four conserved segments were also observed between Hsa15 and mouse, only one of the underlying rearrangement breakpoints was located at the same position as in chicken, indicating that the rearrangements generating the other three breakpoints occurred after the divergence of the rodent and the primate lineages. A high-resolution comparison of Gga10 with Hsa15 identified 19 conserved blocks, indicating the presence of at least 16 intrachromosomal rearrangement breakpoints in the bird lineage after the separation of birds and mammals. These results improve our knowledge of the evolution and dynamics of the vertebrate genomes and will aid in the clarification of the mechanisms that underlie the differentiation between the vertebrate species

Magnetic circular dichroism of x-ray absorption spectroscopy at rare-earth L2,3 edges in RE2Fe14B compounds (RE = La, Pr, Nd, Sm, Gd, Tb, Dy, Ho, Er, Tm, Yb, and Lu)

Magnetic circular dichroism (MCD) in the x-ray absorption spectroscopy (XAS) at the L2,3 edges for almost entire series of rare-earth (RE) elements in RE2Fe14B, is studied experimentally and theoretically. By a quantitative comparison of the complicated MCD spectral shapes, we find that (i) the 4f-5d intra-atomic exchange interaction not only induces the spin and orbital polarization of the 5d states, which is vital for the MCD spectra of the electric dipole transition from the 2p core states to the empty 5d conduction band, but also it accompanies a contraction of the radial part of the 5d wave function depending on its spin and orbital state, which results in the enhancement of the 2p-5d dipole matrix element, (ii) there are cases where the spin polarization of the 5d states due to the hybridization with the spin polarized 3d states of surrounding irons plays important roles, and (iii) the electric quadrupole transition from the 2p core states to the magnetic vale! nce 4f states is appreciable at the pre-edge region of the dipole spectrum. Especially, our results evidence that it is important to include the enhancement effect of the dipole matrix element in the correct interpretation of the MCD spectra at the RE L2,3 edges.Comment: 9 pages, 5 figures, 1 table, REVTe

Comment on ``Spin Polarization and Magnetic Circular Dichroism in Photoemission from the 2p Core Level of Ferromagnetic Ni''

Although the Ni_4 cluster includes more information regarding the Ni band structure with respect to the Anderson impurity model, it also favors very peculiar ground states which are incompatible with a coherent picture of all dichroism experiments.Comment: 1 page, RevTeX, 1 epsf figur

Simultaneous assimilation of satellite and eddy covariance data for improving terrestrial water and carbon simulations at a semi-arid woodland site in Botswana

Terrestrial productivity in semi-arid woodlands is strongly susceptible to changes in precipitation, and semi-arid woodlands constitute an important element of the global water and carbon cycles. Here, we use the Carbon Cycle Data Assimilation System (CCDAS) to investigate the key parameters controlling ecological and hydrological activities for a semi-arid savanna woodland site in Maun, Botswana. Twenty-four eco-hydrological process parameters of a terrestrial ecosystem model are optimized against two data streams separately and simultaneously: daily averaged latent heat flux (LHF) derived from eddy covariance measurements, and decadal fraction of absorbed photosynthetically active radiation (FAPAR) derived from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS). Assimilation of both data streams LHF and FAPAR for the years 2000 and 2001 leads to improved agreement between measured and simulated quantities not only for LHF and FAPAR, but also for photosynthetic CO2 uptake. The mean uncertainty reduction (relative to the prior) over all parameters is 14.9% for the simultaneous assimilation of LHF and FAPAR, 8.5% for assimilating LHF only, and 6.1% for assimilating FAPAR only. The set of parameters with the highest uncertainty reduction is similar between assimilating only FAPAR or only LHF. The highest uncertainty reduction for all three cases is found for a parameter quantifying maximum plant-available soil moisture. This indicates that not only LHF but also satellite-derived FAPAR data can be used to constrain and indirectly observe hydrological quantities.JRC.H.7-Climate Risk Managemen

Resonant Inelastic X-Ray Scattering at the K Edge of Ge

We study the resonant inelastic x-ray scattering (RIXS) at the $K$ edge of Ge. We measure RIXS spectra with systematically varying momenta in the final state. The spectra are a measure of exciting an electron-hole pair. We find a single peak structure (except the elastic peak) as a function of photon energy, which is nearly independent of final-state momenta. We analyze the experimental data by means of the band structure calculation. The calculation reproduces well the experimental shape, clarifying the implication of the spectral shape.Comment: 17 pages,9 figures, Please also see our related paper: cond-mat/040500

Bulk screening in core level photoemission from Mott-Hubbard and Charge-Transfer systems

We report bulk-sensitive hard X-ray ($h\nu$ = 5.95 KeV) core level photoemission spectroscopy (PES) of single crystal V$_{1.98}$Cr$_{0.02}$O$_{3}$ and the high-$T_c$ cuprate Bi$_2$Sr$_{2}$CaCu$_{2}$O$_{8+\delta}$ (Bi2212). V$_{1.98}$Cr$_{0.02}$O$_{3}$ exhibits low binding energy "satellites" to the V $2p$ "main lines" in the metallic phase, which are suppressed in the antiferromagnetic insulator phase. In contrast, the Cu $2p$ spectra of Bi2212 do not show temperature dependent features, but a comparison with soft X-ray PES indicates a large increase in the $2p^5 3d^9$ "satellites" or $3d^9$ weight in the bulk. Cluster model calculations, including full multiplet structure and a screening channel derived from the coherent band at the Fermi energy, give very satisfactory agreement with experiments

A multimedia data visualization based on Ad Hoc communication networks and its application to disaster management

After massive earthquakes and other large-scale disasters, existing communication infrastructure may become unavailable and, therefore, it can be quite difficult for relief organizations to fully grasp the impact of the disaster on the affected region. Consequently, this will be the cause of delays to offer the strategic assistance, and to provide water and food, etc. In order to solve the problem of re-establishing communication infrastructure to allow for information gathering, we developed an ad hoc mobile communications network for disaster-struck areas using ZigBee. As the communication speed of ZigBee is low, we propose a problem-specific image compression method for the multimedia data visualization. By using the proposed method combined with GPS information, it is possible to quickly grasp the damage situation in the region. Through our communication experiments in Tsukuba City, Japan we confirm the effectiveness of our system as a disaster information gathering and management system