HLA-G: expression in human keratinocytes in vitro and in human skin in vivo

Classical, polymorphic major histocompatibility complex class I molecules are expressed on most nucleated cells.They present peptides at the cell surface and, thus, enable the immune system to scan peptides for their antigenicity. The function of the other, nonclassical class I molecules in man is controversial. HLA-G which has been shown by transfection experiments to be expressed at the cell surface, is only transcribed in placental tissue and in the fetal eye.Therefore, a role of HLA-G in the control of rejection of the allogeneic fetus has been discussed. We found that HLA-G expression is induced in keratinocytes by culture in vitro. Three different alternative splicing products of HLA-G can be detected: a full length transcript, an mRNA lacking exon 3 and a transcript devoid of exon 3 and 4. Reverse transcription followed by polymerase chain reaction also revealed the presence of HLA-G mRNA in vivo in biopsies of either diseased or healthy skin

Creating topological interfaces and detecting chiral edge modes in a 2D optical lattice

We propose and analyze a general scheme to create chiral topological edge modes within the bulk of two-dimensional engineered quantum systems. Our method is based on the implementation of topological interfaces, designed within the bulk of the system, where topologically-protected edge modes localize and freely propagate in a unidirectional manner. This scheme is illustrated through an optical-lattice realization of the Haldane model for cold atoms, where an additional spatially-varying lattice potential induces distinct topological phases in separated regions of space. We present two realistic experimental configurations, which lead to linear and radial-symmetric topological interfaces, which both allows one to significantly reduce the effects of external confinement on topological edge properties. Furthermore, the versatility of our method opens the possibility of tuning the position, the localization length and the chirality of the edge modes, through simple adjustments of the lattice potentials. In order to demonstrate the unique detectability offered by engineered interfaces, we numerically investigate the time-evolution of wave packets, indicating how topological transport unambiguously manifests itself within the lattice. Finally, we analyze the effects of disorder on the dynamics of chiral and non-chiral states present in the system. Interestingly, engineered disorder is shown to provide a powerful tool for the detection of topological edge modes in cold-atom setups.Comment: 18 pages, 21 figure

A Finite Difference Representation of Neutrino Radiation Hydrodynamics in Spherically Symmetric General Relativistic Space-Time

We present an implicit finite difference representation for general relativistic radiation hydrodynamics in spherical symmetry. Our code, Agile-Boltztran, solves the Boltzmann transport equation for the angular and spectral neutrino distribution functions in self-consistent simulations of stellar core collapse and postbounce evolution. It implements a dynamically adaptive grid in comoving coordinates. Most macroscopically interesting physical quantities are defined by expectation values of the distribution function. We optimize the finite differencing of the microscopic transport equation for a consistent evolution of important expectation values. We test our code in simulations launched from progenitor stars with 13 solar masses and 40 solar masses. ~0.5 s after core collapse and bounce, the protoneutron star in the latter case reaches its maximum mass and collapses further to form a black hole. When the hydrostatic gravitational contraction sets in, we find a transient increase in electron flavor neutrino luminosities due to a change in the accretion rate. The muon- and tauon-neutrino luminosities and rms energies, however, continue to rise because previously shock-heated material with a non-degenerate electron gas starts to replace the cool degenerate material at their production site. We demonstrate this by supplementing the concept of neutrinospheres with a more detailed statistical description of the origin of escaping neutrinos. We compare the evolution of the 13 solar mass progenitor star to simulations with the MGFLD approximation, based on a recently developed flux limiter. We find similar results in the postbounce phase and validate this MGFLD approach for the spherically symmetric case with standard input physics.Comment: reformatted to 63 pages, 24 figures, to be published in ApJ

Experimental characterization of railgun-driven supersonic plasma jets motivated by high energy density physics applications

We report experimental results on the parameters, structure, and evolution of high-Mach-number (M) argon plasma jets formed and launched by a pulsed-power-driven railgun. The nominal initial average jet parameters in the data set analyzed are density \approx 2 x 10^(16) cm^(-3), electron temperature \approx 1.4 eV, velocity \approx 30 km/s, M \approx 14, ionization fraction \approx 0.96, diameter \approx 5 cm, and length \approx 20 cm. These values approach the range needed by the Plasma Liner Experiment (PLX), which is designed to use merging plasma jets to form imploding spherical plasma liners that can reach peak pressures of 0.1-1 Mbar at stagnation. As these jets propagate a distance of approximately 40 cm, the average density drops by one order of magnitude, which is at the very low end of the 8-160 times drop predicted by ideal hydrodynamic theory of a constant-M jet.Comment: 35 pages, 2 tables, 14 figures, accepted for publication in Physics of Plasmas (12/11/2012

Construction of an Environmental Quality Index for Public Health Research

Background A more comprehensive estimate of environmental quality would improve our understanding of the relationship between environmental conditions and human health. An environmental quality index (EQI) for all counties in the U.S. was developed. Methods The EQI was developed in four parts: domain identification; data source acquisition; variable construction; and data reduction. Five environmental domains (air, water, land, built and sociodemographic) were recognized. Within each domain, data sources were identified; each was temporally (years 2000–2005) and geographically (county) restricted. Variables were constructed for each domain and assessed for missingness, collinearity, and normality. Domain-specific data reduction was accomplished using principal components analysis (PCA), resulting in domain-specific indices. Domain-specific indices were then combined into an overall EQI using PCA. In each PCA procedure, the first principal component was retained. Both domain-specific indices and overall EQI were stratified by four rural–urban continuum codes (RUCC). Higher values for each index were set to correspond to areas with poorer environmental quality. Results Concentrations of included variables differed across rural–urban strata, as did within-domain variable loadings, and domain index loadings for the EQI. In general, higher values of the air and sociodemographic indices were found in the more metropolitan areas and the most thinly populated areas have the lowest values of each of the domain indices. The less-urbanized counties (RUCC 3) demonstrated the greatest heterogeneity and range of EQI scores (−4.76, 3.57) while the thinly populated strata (RUCC 4) contained counties with the most positive scores (EQI score ranges from −5.86, 2.52). Conclusion The EQI holds promise for improving our characterization of the overall environment for public health. The EQI describes the non-residential ambient county-level conditions to which residents are exposed and domain-specific EQI loadings indicate which of the environmental domains account for the largest portion of the variability in the EQI environment. The EQI was constructed for all counties in the United States, incorporating a variety of data to provide a broad picture of environmental conditions. We undertook a reproducible approach that primarily utilized publically-available data sources

Exploiting the neutronization burst of a galactic supernova

One of the robust features found in simulations of core-collapse supernovae (SNe) is the prompt neutronization burst, i.e. the first $\sim 25$ milliseconds after bounce when the SN emits with very high luminosity mainly $\nu_e$ neutrinos. We examine the dependence of this burst on variations in the input of current SN models and find that recent improvements of the electron capture rates as well as uncertainties in the nuclear equation of state or a variation of the progenitor mass have only little effect on the signature of the neutronization peak in a megaton water Cherenkov detector for different neutrino mixing schemes. We show that exploiting the time-structure of the neutronization peak allows one to identify the case of a normal mass hierarchy and large 13-mixing angle $\theta_{13}$, where the peak is absent. The robustness of the predicted total event number in the neutronization burst makes a measurement of the distance to the SN feasible with a precision of about 5%, even in the likely case that the SN is optically obscured.Comment: 14 pages, 17 eps figures, revtex4 style, minor comments adde

The consequences of nuclear electron capture in core collapse supernovae

The most important weak nuclear interaction to the dynamics of stellar core collapse is electron capture, primarily on nuclei with masses larger than 60. In prior simulations of core collapse, electron capture on these nuclei has been treated in a highly parameterized fashion, if not ignored. With realistic treatment of electron capture on heavy nuclei come significant changes in the hydrodynamics of core collapse and bounce. We discuss these as well as the ramifications for the post-bounce evolution in core collapse supernovae.Comment: Accepted by PRL, 5 pages, 2 figure

Gravitational Waves from Core Collapse Supernovae

We present the gravitational wave signatures for a suite of axisymmetric core collapse supernova models with progenitors masses between 12 and 25 solar masses. These models are distinguished by the fact they explode and contain essential physics (in particular, multi-frequency neutrino transport and general relativity) needed for a more realistic description. Thus, we are able to compute complete waveforms (i.e., through explosion) based on non-parameterized, first-principles models. This is essential if the waveform amplitudes and time scales are to be computed more precisely. Fourier decomposition shows that the gravitational wave signals we predict should be observable by AdvLIGO across the range of progenitors considered here. The fundamental limitation of these models is in their imposition of axisymmetry. Further progress will require counterpart three-dimensional models.Comment: 10 pages, 5 figure