616 research outputs found
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Quantitative Precipitation Nowcasting: A Lagrangian Pixel-Based Approach
Short-term high-resolution precipitation forecasting has important implications for navigation, flood forecasting, and other hydrological and meteorological concerns. This article introduces a pixel-based algorithm for Short-term Quantitative Precipitation Forecasting (SQPF) using radar-based rainfall data. The proposed algorithm called Pixel- Based Nowcasting (PBN) tracks severe storms with a hierarchical mesh-tracking algorithm to capture storm advection in space and time at high resolution from radar imagers. The extracted advection field is then extended to nowcast the rainfall field in the next 3. hr based on a pixel-based Lagrangian dynamic model. The proposed algorithm is compared with two other nowcasting algorithms (WCN: Watershed-Clustering Nowcasting and PER: PERsistency) for ten thunderstorm events over the conterminous United States. Object-based verification metric and traditional statistics have been used to evaluate the performance of the proposed algorithm. It is shown that the proposed algorithm is superior over comparison algorithms and is effective in tracking and predicting severe storm events for the next few hours. © 2012 Elsevier B.V
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Semiconductor microlasers with intracavity microfluidics for biomedical analyses
Recently demonstrated microfluidic chips have the potential to be useful bioanalytical tools for DNA, protein, and cellular studies. To realize this potential, means for introducing fluids, separating their components, and detection must be integrated onto the chip. The authors have investigated semiconductor laser microcavity spectroscopy as a means for ultrasensitive detection of various fluids, cells, and particulates. Two methods for implementing this laser device are illustrated. A scanning method for reading the light signals from a static fluid in the microcavity is presented. The device has a microfabricated flow structure formed between two surfaces, a vertical cavity surface-emitting laser and a glass dielectric mirror. The resonance frequencies of this Fabry-Perot microcavity are very sensitive to the dielectric properties of the fluids confined inside the cavity. Further, the resonance linewidth or cavity Q is sensitive to the optical length of the cavity, light absorption, and light scattering from the fluid and the surfaces forming the cavity. If cells or particulates are present in the fluid they confine light transverse to the cavity length and develop additional sub-frequencies between the Fabry-Perot frequencies. Thus, the spectrum of light emitted from or transmitted through the cavity comprises a wealth of information about the cavity contents
Identifying and overcoming a mechanism of resistance to WEE1 kinase inhibitor AZD1775 in high grade serous ovarian cancer cells
Gene expression time delays & Turing pattern formation systems
The incorporation of time delays can greatly affect the behaviour of partial differential equations and dynamical systems. In addition, there is evidence that time delays in gene expression due to transcription and translation play an important role in the dynamics of cellular systems. In this paper, we investigate the effects of incorporating gene expression time delays into a one-dimensional putative reaction diffusion pattern formation mechanism on both stationary domains and domains with spatially uniform exponential growth. While oscillatory behaviour is rare, we find that the time taken to initiate and stabilise patterns increases dramatically as the time delay is increased. In addition, we observe that on rapidly growing domains the time delay can induce a failure of the Turing instability which cannot be predicted by a naive linear analysis of the underlying equations about the homogeneous steady state. The dramatic lag in the induction of patterning, or even its complete absence on occasions, highlights the importance of considering explicit gene expression time delays in models for cellular reaction diffusion patterning
High EMSY expression defines a BRCA‐like subgroup of high‐grade serous ovarian carcinoma with prolonged survival and hypersensitivity to platinum
Background
Approximately half of high‐grade serous ovarian carcinomas (HGSOCs) demonstrate homologous recombination repair (HR) pathway defects, resulting in a distinct clinical phenotype comprising hypersensitivity to platinum, superior clinical outcome, and greater sensitivity to poly(adenosine diphosphate‐ribose) polymerase (PARP) inhibitors. EMSY, which is known to be amplified in breast and ovarian cancers, encodes a protein reported to bind and inactivate BRCA2. Thus, EMSY overexpression may mimic BRCA2 mutation, resulting in HR deficiency. However, to our knowledge, the phenotypic consequences of EMSY overexpression in HGSOC patients has not been explored.
Methods
Here we investigate the impact of EMSY expression on clinical outcome and sensitivity to platinum‐based chemotherapy using available data from transcriptomically characterized HGSOC cohorts.
Results
High EMSY expression was associated with better clinical outcome in a cohort of 265 patients with HGSOC from Edinburgh (overall survival multivariable hazard ratio, 0.58 [95% CI, 0.38‐0.88; P = .011] and progression‐free survival multivariable hazard ratio, 0.62 [95% CI, 0.40‐0.96; P = .030]). Superior outcome also was demonstrated in the Medical Research Council ICON7 clinical trial and multiple publicly available data sets. Patients within the Edinburgh cohort who had high EMSY expression were found to demonstrate greater rates of complete response to multiple platinum‐containing chemotherapy regimens (radiological complete response rate of 44.4% vs 12.5% at second exposure; P = .035) and corresponding prolonged time to disease progression (median, 151.5 days vs 60.5 days after third platinum exposure; P = .004).
Conclusions
Patients with HGSOCs demonstrating high EMSY expression appear to experience prolonged survival and greater platinum sensitivity, reminiscent of BRCA‐mutant cases. These data are consistent with the notion that EMSY overexpression may render HGSOCs HR deficient
Effect of the GaAsP shell on optical properties of self-catalyzed GaAs nanowires grown on silicon
We realize growth of self-catalyzed core-shell GaAs/GaAsP nanowires (NWs) on
Si substrates using molecular-beam epitaxy. Transmission electron microscopy
(TEM) of single GaAs/GaAsP NWs confirms their high crystal quality and shows
domination of the zinc-blende phase. This is further confirmed in optics of
single NWs, studied using cw and time-resolved photoluminescence (PL). A
detailed comparison with uncapped GaAs NWs emphasizes the effect of the GaAsP
capping in suppressing the non-radiative surface states: significant PL
enhancement in the core-shell structures exceeding 2000 times at 10K is
observed; in uncapped NWs PL is quenched at 60K whereas single core-shell
GaAs/GaAsP NWs exhibit bright emission even at room temperature. From analysis
of the PL temperature dependence in both types of NW we are able to determine
the main carrier escape mechanisms leading to the PL quench
Statistical Mechanics of Dilute Batch Minority Games with Random External Information
We study the dynamics and statics of a dilute batch minority game with random
external information. We focus on the case in which the number of connections
per agent is infinite in the thermodynamic limit. The dynamical scenario of
ergodicity breaking in this model is different from the phase transition in the
standard minority game and is characterised by the onset of long-term memory at
finite integrated response. We demonstrate that finite memory appears at the
AT-line obtained from the corresponding replica calculation, and compare the
behaviour of the dilute model with the minority game with market impact
correction, which is known to exhibit similar features.Comment: 22 pages, 6 figures, text modified, references updated and added,
figure added, typos correcte
Quantum saturation and condensation of excitons in CuO: a theoretical study
Recent experiments on high density excitons in CuO provide evidence for
degenerate quantum statistics and Bose-Einstein condensation of this nearly
ideal gas. We model the time dependence of this bosonic system including
exciton decay mechanisms, energy exchange with phonons, and interconversion
between ortho (triplet-state) and para (singlet-state) excitons, using
parameters for the excitonic decay, the coupling to acoustic and low-lying
optical phonons, Auger recombination, and ortho-para interconversion derived
from experiment. The single adjustable parameter in our model is the
optical-phonon cooling rate for Auger and laser-produced hot excitons. We show
that the orthoexcitons move along the phase boundary without crossing it (i.e.,
exhibit a ``quantum saturation''), as a consequence of the balance of entropy
changes due to cooling of excitons by phonons and heating by the non-radiative
Auger two-exciton recombination process. The Auger annihilation rate for
para-para collisions is much smaller than that for ortho-para and ortho-ortho
collisions, explaining why, under the given experimental conditions, the
paraexcitons condense while the orthoexcitons fail to do so.Comment: Revised to improve clarity and physical content 18 pages, revtex,
figures available from G. Kavoulakis, Physics Department, University of
Illinois, Urban
Neonatal jaundice and stool production in breast- or formula-fed term infants
It has remained unclear whether the amount of fecal fat excreted in the stool and stool production influences the severity of neonatal jaundice. We determined the relationship between stool production, fecal fat excretion and jaundice in healthy breast-fed (BF) or formula-fed (FF) (near-)term neonates. From postnatal day 1–4, we quantitatively collected stools from 27 FF and 33 BF infants in daily fractions. Stool production and fecal fat contents were related to unconjugated bilirubin (UCB) levels, as determined by transcutaneous bilirubinometry (TcB). Bilirubin concentrations and stool production did not differ between FF and BF neonates during the study period. Neonatal bilirubin levels were not inversely correlated with stool production. FF and BF infants had similar fecal fat excretion rates. The stool production of FF infants was profoundly lower in the present study than in a 1985 study by De Carvalho et al. [J Pediatr (1985) 107:786–790]. We conclude that increased jaundice during the first postnatal days in healthy term neonates can no longer be attributed to breast-feeding and speculate that improved absorbability of formulas since 1985 has contributed to similar fat excretion and stool production in FF and BF neonates in 2007
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