Grafikus adatbázis-kezelő webalkalmazás, adatvizualizációs eszközökkel

Egy olyan felhasználóbarát webalkalmazás biztosítása a cél, mai alkalmas adattáblák kiterjedt körű kezelésére

Reticular alignment: A progressive corner-cutting method for multiple sequence alignment

<p>Abstract</p> <p>Background</p> <p>In this paper, we introduce a progressive corner cutting method called Reticular Alignment for multiple sequence alignment. Unlike previous corner-cutting methods, our approach does not define a compact part of the dynamic programming table. Instead, it defines a set of optimal and suboptimal alignments at each step during the progressive alignment. The set of alignments are represented with a network to store them and use them during the progressive alignment in an efficient way. The program contains a threshold parameter on which the size of the network depends. The larger the threshold parameter and thus the network, the deeper the search in the alignment space for better scored alignments.</p> <p>Results</p> <p>We implemented the program in the Java programming language, and tested it on the BAliBASE database. Reticular Alignment can outperform ClustalW even if a very simple scoring scheme (BLOSUM62 and affine gap penalty) is implemented and merely the threshold value is increased. However, this set-up is not sufficient for outperforming other cutting-edge alignment methods. On the other hand, the reticular alignment search strategy together with sophisticated scoring schemes (for example, differentiating gap penalties for hydrophobic and hydrophylic amino acids) overcome FSA and in some accuracy measurement, even MAFFT. The program is available from <url>http://phylogeny-cafe.elte.hu/RetAlign/</url></p> <p>Conclusions</p> <p>Reticular alignment is an efficient search strategy for finding accurate multiple alignments. The highest accuracy achieved when this searching strategy is combined with sophisticated scoring schemes.</p

OWLAP - using OLAP approach in anomaly detection

OWLAP (Operative Workbench for Large-scale Analytics and Presentation) is a visual analytics tool that allows the user to browse and drill down the multidimensional data on-line with the possibility to export result into a zooming presentation framework. We address the challenges of multidimensional visualization by aiding the cognitively hard task of understanding attributes, finding patterns and outliers. We successfully solved the challenge of real time Big Data OLAP reporting by a home developed multithreaded inmemory database manager. Our additional focus is the automatic management of summary preparation that we aid by scripting the presentation framework of Prezi Inc