Obesity and prostate cancer-specific mortality after radical prostatectomy: results from the Shared Equal Access Regional Cancer Hospital (SEARCH) database.

BackgroundAt the population level, obesity is associated with prostate cancer (PC) mortality. However, few studies analyzed the associations between obesity and long-term PC-specific outcomes after initial treatment.MethodsWe conducted a retrospective analysis of 4268 radical prostatectomy patients within the Shared Equal Access Regional Cancer Hospital (SEARCH) database. Cox models accounting for known risk factors were used to examine the associations between body mass index (BMI) and PC-specific mortality (PCSM; primary outcome). Secondary outcomes included biochemical recurrence (BCR) and castration-resistant PC (CRPC). BMI was used as a continuous and categorical variable (normal <25 kg/m2, overweight 25-29.9 kg/m2 and obese ⩾30 kg/m2). Median follow-up among all men who were alive at last follow-up was 6.8 years (interquartile range=3.5-11.0). During this time, 1384 men developed BCR, 117 developed CRPC and 84 died from PC. Hazard ratios were analyzed using competing-risks regression analysis accounting for non-PC death as a competing risk.ResultsOn crude analysis, higher BMI was not associated with risk of PCSM (P=0.112), BCR (0.259) and CRPC (P=0.277). However, when BMI was categorized, overweight (hazard ratio (HR) 1.99, P=0.034) and obesity (HR 1.97, P=0.048) were significantly associated with PCSM. Obesity and overweight were not associated with BCR or CRPC (all P⩾0.189). On multivariable analysis adjusting for both clinical and pathological features, results were little changed in that obesity (HR=2.05, P=0.039) and overweight (HR=1.88, P=0.061) were associated with higher risk of PCSM, but not with BCR or CRPC (all P⩾0.114) with the exception that the association for overweight was no longer statistical significant.ConclusionsOverweight and obesity were associated with increased risk of PCSM after radical prostatectomy. If validated in larger studies with longer follow-up, obesity may be established as a potentially modifiable risk factor for PCSM

Prostate cancer in Asia: a collaborative report

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Optimization of Transparent Electrode Processing Conditions for Bulk Heterojunction Solar Cells

In this work, semi-transparent inverted polymer solar cells with poly(3,4-ethylenedioxythiophene):poly(styrenesulfonate; PEDOT:PSS) top electrodes were fabricated by spin-coating process. Poly(3-hexylthiophene; P3HT):[6,6]-phenyl C 61 -butyric acid methyl ester (PCBM) was used as a model material combination for a bulk heterojunction solar cell, because this material combination has been frequently studied, and its properties and performance have been well established. For enhancing the wetting of P3HT:PCBM blend film, different plasma etching conditions were tried. In addition, different high boiling point organic additives were tried to enhance the conductivity of PEDOT:PSS. The performance of solar cells with different fabrication conditions for the top electrode was compared. The best performance was obtained for Ar plasma etching to improve wetting of PEDOT:PSS and the addition of ethylene glycol to improve conductivity.published_or_final_versio

De novo sequencing and analysis of the American ginseng root transcriptome using a GS FLX Titanium platform to discover putative genes involved in ginsenoside biosynthesis

<p>Abstract</p> <p>Background</p> <p>American ginseng (<it>Panax quinquefolius </it>L.) is one of the most widely used herbal remedies in the world. Its major bioactive constituents are the triterpene saponins known as ginsenosides. However, little is known about ginsenoside biosynthesis in American ginseng, especially the late steps of the pathway.</p> <p>Results</p> <p>In this study, a one-quarter 454 sequencing run produced 209,747 high-quality reads with an average sequence length of 427 bases. <it>De novo </it>assembly generated 31,088 unique sequences containing 16,592 contigs and 14,496 singletons. About 93.1% of the high-quality reads were assembled into contigs with an average 8-fold coverage. A total of 21,684 (69.8%) unique sequences were annotated by a BLAST similarity search against four public sequence databases, and 4,097 of the unique sequences were assigned to specific metabolic pathways by the Kyoto Encyclopedia of Genes and Genomes. Based on the bioinformatic analysis described above, we found all of the known enzymes involved in ginsenoside backbone synthesis, starting from acetyl-CoA via the isoprenoid pathway. Additionally, a total of 150 cytochrome P450 (CYP450) and 235 glycosyltransferase unique sequences were found in the 454 cDNA library, some of which encode enzymes responsible for the conversion of the ginsenoside backbone into the various ginsenosides. Finally, one CYP450 and four UDP-glycosyltransferases were selected as the candidates most likely to be involved in ginsenoside biosynthesis through a methyl jasmonate (MeJA) inducibility experiment and tissue-specific expression pattern analysis based on a real-time PCR assay.</p> <p>Conclusions</p> <p>We demonstrated, with the assistance of the MeJA inducibility experiment and tissue-specific expression pattern analysis, that transcriptome analysis based on 454 pyrosequencing is a powerful tool for determining the genes encoding enzymes responsible for the biosynthesis of secondary metabolites in non-model plants. Additionally, the expressed sequence tags (ESTs) and unique sequences from this study provide an important resource for the scientific community that is interested in the molecular genetics and functional genomics of American ginseng.</p

Foraminiferal biostratigraphy and palaeoenvironmental analysis of the mid-Cretaceous limestones in the southern Tibetan plateau

This study of mid-Cretaceous foraminifera from the Linzhou, the Coqen and the Xigaze Basins in the southern Tibetan Plateau has provided the first high resolution biostratigraphic description of these limestones and interpretation of their paleoenvironmental settings. The fossil assemblages are dominated primarily by orbitolinid larger benthic foraminifera. We reassessed the identification of many taxa, dividing the South Tibetan sedimentary successions of Aptian to Early Cenomanian age into eight new foraminiferal biozones (TLK1 a–h): (i) (TLK1a) a shallow reefal environment corresponding to planktonic foraminifera zone (PZ) Aptian 1–2, dominated by Palorbitolina and Praeorbitolina spp.; (ii) (TLK1b) a transgressive, reefal to forereefal environment corresponding to PZ Aptian 3, characterized by the first appearance of Mesorbitolina parva; (iii) (TLK1c) a shallow reefal to backreef environment of Late Aptian (PZ Aptian 4) age, characterized by the first appearance of Mesorbitolina texana; (iv) (TLK1d) a transgressive phase of forereef to an inner neritic environment of Albian (PZ Albian 1) age, characterized by the first appearance of Cuneolina pavonia; (v) (TLKe) an open-marine reefal environment of Albian (PZ Albian 2) age, with assemblages dominated by flat to slightly conical orbitolinids, characterized by the first appearance of Palorbitolinoides hedini; (vi) (TLK1f) a shallow, open-marine reefal to forereef environment of Middle Albian (PZ Albian 3) age, dominated by flat and convex orbitolinids, and characterized by the first appearance of Mesorbitolina aperta; (vii) (TLK1g) a reefal to forereef environment of end Albian (PZ Albian 4) age, characterized by the appearance of Conicorbitolina cf. cuvillieri and Pseudochoffatella cuvillieri, and in which Early Aptian species of Praeorbitolina cf. wienandsi have been recorded for the first time from the Late Albian; (viii) (TLK1h) a shallow reefal environment of Early Cenomanian age characterized by the first appearance of Conicorbitolina sp. A and Nezzazata conica. The eight new biozones provided biostratigraphic correlation of the Langshan, Sangzugang and Takena Formations in the Lhasa terrane, while the observed evolution of the environmentally controlled microfacies corresponds closely with the current, inferred global sea-level variation of the period. The almost continuous sedimentary sequences studied allowed previously defined orbitolinid phylogenetic linages to be confirmed

Indium tin oxide nanowires growth by dc sputtering

Indium tin oxide nanowires have been grown by dc sputtering on different substrates without the use of catalysts or oblique deposition. The nanowire length was of the order of several μm, while their diameter was ∼50- 100 nm. Small side branches on the nanowires were frequently observed. The nanowires were characterized by scanning electron microscopy, transmission electron microscopy, and X-ray diffraction. The growth mechanism of the nanowires is discussed. © Springer-Verlag 2011.published_or_final_versionSpringer Open Choice, 21 Feb 201

A systematic review of geographical differences in management and outcomes for colorectal cancer in Australia.

BACKGROUND: Australia and New Zealand have the highest incidence of colorectal cancer (CRC) in the world, presenting considerable health, economic, and societal burden. Over a third of the Australian population live in regional areas and research has shown they experience a range of health disadvantages that result in a higher disease burden and lower life expectancy. The extent to which geographical disparities exist in CRC management and outcomes has not been systematically explored. The present review aims to identify the nature of geographical disparities in CRC survival, clinical management, and psychosocial outcomes. METHODS: The review followed PRISMA guidelines and searches were undertaken using seven databases covering articles between 1 January 1990 and 20 April 2016 in an Australian setting. Inclusion criteria stipulated studies had to be peer-reviewed, in English, reporting data from Australia on CRC patients and relevant to one of fourteen questions examining geographical variations in a) survival outcomes, b) patient and cancer characteristics, c) diagnostic and treatment characteristics and d) psychosocial and quality of life outcomes. RESULTS: Thirty-eight quantitative, two qualitative, and three mixed-methods studies met review criteria. Twenty-seven studies were of high quality, sixteen studies were of moderate quality, and no studies were found to be low quality. Individuals with CRC living in regional, rural, and remote areas of Australia showed poorer survival and experienced less optimal clinical management. However, this effect is likely moderated by a range of other factors (e.g., SES, age, gender) and did appear to vary linearly with increasing distance from metropolitan centres. No studies examined differences in use of stoma, or support with stomas, by geographic location. CONCLUSIONS: Overall, despite evidence of disparity in CRC survival and clinical management across geographic locations, the evidence was limited and at times inconsistent. Further, access to treatment and services may not be the main driver of disparities, with individual patient characteristics and type of region also playing an important role. A better understanding of factors driving ongoing and significant geographical disparities in cancer related outcomes is required to inform the development of effective interventions to improve the health and welfare of regional Australians

Review of multi-scale electromagnetic modeling

This paper reviews various methods to solve multiscale problems ranging from low-frequency methods to very high-frequency methods. ©2010 IEEE.published_or_final_versionThe 2010 International Conference on Electromagnetics in Advanced Applications (ICEAA), Sydney, N.S.W., 20-24 September 2010. In Proceedings of ICEAA'10, 2010, p. 641-64

Intracellular interferons in fish : a unique means to combat viral infection

Peer reviewedPublisher PD