Spontaneous reconnection at a separator current layer : 2. Nature of the waves and flows

JEHS would like to thank STFC for financial support during her Ph.D and continued support after on the St Andrews SMTG’s STFC consortium grant. CEP also acknowledges support from this same grant.Sudden destabilizations of the magnetic field, such as those caused by spontaneous reconnection, will produce waves and/or flows. Here we investigate the nature of the plasma motions resulting from spontaneous reconnection at a 3‐D separator. In order to clearly see these perturbations, we start from a magnetohydrostatic equilibrium containing two oppositely signed null points joined by a generic separator along which lies a twisted current layer. The nature of the magnetic reconnection initiated in this equilibrium as a result of an anomalous diffusivity is discussed in detail in Stevenson and Parnell (2015). The resulting sudden loss of force balance inevitably generates waves that propagate away from the diffusion region carrying the dissipated current. In their wake a twisting stagnation flow, in planes perpendicular to the separator, feeds flux back into the original diffusion site (the separator) in order to try to regain equilibrium. This flow drives a phase of slow weak impulsive bursty reconnection that follows on after the initial fast‐reconnection phase.Publisher PDFPeer reviewe

Spontaneous reconnection at a separator current layer : I. Nature of the reconnection

Magnetic separators, which lie on the boundary between four topologically-distinct flux domains, are prime locations in three-dimensional magnetic fields for reconnection, especially in the magnetosphere between the planetary and interplanetary magnetic fields and also in the solar atmosphere. Little is known about the details of separator reconnection and so the aim of this paper, which is the first of two, is to study the properties of magnetic reconnection at a single separator. Three-dimensional, resistive magnetohydrodynamic numerical experiments are run to study separator reconnection starting from a magnetohydrostatic equilibrium which contains a twisted current layer along a single separator linking a pair of opposite-polarity null points. The resulting reconnection occurs in two phases. The first is short involving rapid reconnection in which the current at the separator is reduced by a factor of around 2.3. Most 75% of the magnetic energy is converted during this phase, via Ohmic dissipation, directly into internal energy, with just 0.1% going into kinetic energy. During this phase the reconnection occurs along most of the separator away from its ends (the nulls), but in an asymmetric manner which changes both spatially and temporally over time. The second phase is much longer and involves slow impulsive-bursty reconnection. Again Ohmic heating dominates over viscous damping. Here the reconnection occurs in small localized bursts at random anywhere along the separator.Publisher PDFPeer reviewe

Is magnetic topology important for heating the solar atmosphere?

CEP and JT acknowledge the support of STFC through the St Andrew’s SMTG consolidated grant. JEHS is supported by STFC as a PhD student. SJE is supported STFC through the Durham University Impact Acceleration Account.Magnetic fields permeate the entire solar atmosphere weaving an extremely complex pattern on both local and global scales. In order to understand the nature of this tangled web of magnetic fields, its magnetic skeleton, which forms the boundaries between topologically distinct flux domains, may be determined. The magnetic skeleton consists of null points, separatrix surfaces, spines and separators. The skeleton is often used to clearly visualize key elements of the magnetic configuration, but parts of the skeleton are also locations where currents and waves may collect and dissipate. In this review, the nature of the magnetic skeleton on both global and local scales, over solar cycle time scales, is explained. The behaviour of wave pulses in the vicinity of both nulls and separators is discussed and so too is the formation of current layers and reconnection at the same features. Each of these processes leads to heating of the solar atmosphere, but collectively do they provide enough heat, spread over a wide enough area, to explain the energy losses throughout the solar atmosphere? Here, we consider this question for the three different solar regions: Active regions, open-field regions and the quiet Sun. We find that the heating of active regions and open-field regions is highly unlikely to be due to reconnection or wave dissipation at topological features, but it is possible that these may play a role in the heating of the quiet Sun. In active regions, the absence of a complex topology may play an important role in allowing large energies to build up and then, subsequently, be explosively released in the form of a solar flare. Additionally, knowledge of the intricate boundaries of open-field regions (which the magnetic skeleton provides) could be very important in determining the main acceleration mechanism(s) of the solar wind.PostprintPeer reviewe

Structure of the Mycobacterium smegmatis alpha-maltose-1-phosphate synthase GlgM

Mycobacterium tuberculosis produces glycogen (also known as alpha-glucan) to help evade human immunity. This pathogen uses the GlgE pathway to generate glycogen rather than the more well known glycogen synthase GlgA pathway, which is absent in this bacterium. Thus, the building block for this glucose polymer is alpha-maltose-1-phosphate rather than an NDP-glucose donor. One of the routes to alpha-maltose-1-phosphate is now known to involve the GlgA homologue GlgM, which uses ADP-glucose as a donor and alpha-glucose-1-phosphate as an acceptor. To help compare GlgA (a GT5 family member) with GlgM enzymes (GT4 family members), the X-ray crystal structure of GlgM from Mycobacterium smegmatis was solved to 1.9 angstrom resolution. While the enzymes shared a GT-B fold and several residues responsible for binding the donor substrate, they differed in some secondary-structural details, particularly in the N-terminal domain, which would be expected to be largely responsible for their different acceptor-substrate specificities

The crystal structure of Escherichia coli TdcF, a member of the highly conserved YjgF/YER057c/UK114 family

BACKGROUND: The YjgF/YER057c/UK114 family of proteins is widespread in nature, but has as yet no clearly defined biological role. Members of the family exist as homotrimers and are characterised by intersubunit clefts that are delineated by well-conserved residues; these sites are likely to be of functional significance, yet catalytic activity has never been detected for any member of this family. The gene encoding the TdcF protein of E. coli, a YjgF/YER057c/UK114 family member, resides in an operon that strongly suggests a role in the metabolism of 2-ketobutyrate for this protein. RESULTS: We have determined the crystal structure of E. coli TdcF by molecular replacement to a maximum resolution of 1.6 Å. Structures are also presented of TdcF complexed with a variety of ligands. CONCLUSION: The TdcF structure closely resembles those of all YjgF/YER057c/UK114 family members determined thus far. It has the trimeric quaternary structure and intersubunit cavities characteristic of this family of proteins. We show that TdcF is capable of binding several low molecular weight metabolites bearing a carboxylate group, although the interaction with 2-ketobutyrate appears to be the most well defined. These observations may be indicative of a role for TdcF in sensing this potentially toxic metabolite

Ellipticity weakens chameleon screening

The chameleon mechanism enables a long-range fifth force to be screened in dense environments when nontrivial self-interactions of the field cause its mass to increase with the local density. To date, chameleon fifth forces have mainly been studied for spherically symmetric sources; however, the nonlinear self-interactions mean that the chameleon responds to changes in the shape of the source differently to gravity. In this work we focus on ellipsoidal departures from spherical symmetry and compute the full form of the chameleon force, comparing its shape dependence to that of gravity. Enhancement of the chameleon force by up to 40% is possible when deforming a sphere to an ellipsoid of the same mass, with an ellipticity ∼0.99

Stagnation temperature measurement using thin-film platinum resistance sensors

The measurement of stagnation temperature in high-speed flows is an important aspect of gas turbine engine testing. The ongoing requirement to improve the accuracy of such measurements has led to the development of probe systems that use a thin-film platinum resistance thermometer (PRT) as the sensing element. For certain aspects of engine testing this type of sensing device potentially offers superior measurement performance to the thermocouple, the temperature sensor of choice in most gas turbine applications. This paper considers the measurement performance of prototype PRT-based stagnation temperature probes, up to high-subsonic flow conditions, using passively aspirated probe heads. The relatively poor temperature recovery performance of a simply constructed probe has led to the development of a new design that is intended to reduce the impact of thermal conduction within the probe assembly. The performance of this so-called dual-skin probe has been measured through a series of tests at a range of Mach numbers, incidence angles and Reynolds numbers. The data reveal that a high probe recovery factor has been achieved with this device, and that the application of this design to engine tests would yield the measurement performance benefits of the PRT whilst requiring small levels of temperature recovery compensation

A proposed experimental search for chameleons using asymmetric parallel plates

Light scalar fields coupled to matter are a common consequence of theories of dark energy and attempts to solve the cosmological constant problem. The chameleon screening mechanism is commonly invoked in order to suppress the fifth forces mediated by these scalars, sufficiently to avoid current experimental constraints, without fine tuning. The force is suppressed dynamically by allowing the mass of the scalar to vary with the local density. Recently it has been shown that near future cold atoms experiments using atom-interferometry have the ability to access a large proportion of the chameleon parameter space. In this work we demonstrate how experiments utilising asymmetric parallel plates can push deeper into the remaining parameter space available to the chameleon

Combination probes for stagnation pressure and temperature measurements in gas turbine engines

During gas turbine engine testing, steady-state gas-path stagnation pressures and temperatures are measured in order to calculate the efficiencies of the main components of turbomachinery. These measurements are acquired using fixed intrusive probes, which are installed at the inlet and outlet of each component at discrete point locations across the gas-path. The overall uncertainty in calculated component efficiency is sensitive to the accuracy of discrete point pressures and temperatures, as well as the spatial sampling across the gas-path. Both of these aspects of the measurement system must be considered if more accurate component efficiencies are to be determined. High accuracy has become increasingly important as engine manufacturers have begun to pursue small gains in component performance, which require efficiencies to be resolved to within less than ±1%. This article reports on three new probe designs that have been developed in a response to this demand. The probes adopt a compact combination arrangement that facilitates up to twice the spatial coverage compared to individual stagnation pressure and temperature probes. The probes also utilise novel temperature sensors and high recovery factor shield designs that facilitate improvements in point measurement accuracy compared to standard Kiel probes used in engine testing. These changes allow efficiencies to be resolved within ±1% over a wider range of conditions than is currently achievable with Kiel probes