169 research outputs found
Progress of the Felsenkeller shallow-underground accelerator for nuclear astrophysics
Low-background experiments with stable ion beams are an important tool for
putting the model of stellar hydrogen, helium, and carbon burning on a solid
experimental foundation. The pioneering work in this regard has been done by
the LUNA collaboration at Gran Sasso, using a 0.4 MV accelerator. In the
present contribution, the status of the project for a higher-energy underground
accelerator is reviewed. Two tunnels of the Felsenkeller underground site in
Dresden, Germany, are currently being refurbished for the installation of a 5
MV high-current Pelletron accelerator. Construction work is on schedule and
expected to complete in August 2017. The accelerator will provide intense, 50
uA, beams of 1H+, 4He+, and 12C+ ions, enabling research on astrophysically
relevant nuclear reactions with unprecedented sensitivity.Comment: Submitted to the Proceedings of Nuclei in the Cosmos XIV, 19-24 June
2016, Niigata/Japa
The new Felsenkeller 5 MV underground accelerator
The field of nuclear astrophysics is devoted to the study of the creation of
the chemical elements. By nature, it is deeply intertwined with the physics of
the Sun. The nuclear reactions of the proton-proton cycle of hydrogen burning,
including the 3He({\alpha},{\gamma})7Be reaction, provide the necessary nuclear
energy to prevent the gravitational collapse of the Sun and give rise to the by
now well-studied pp, 7Be, and 8B solar neutrinos. The not yet measured flux of
13N, 15O, and 17F neutrinos from the carbon-nitrogen-oxygen cycle is affected
in rate by the 14N(p,{\gamma})15O reaction and in emission profile by the
12C(p,{\gamma})13N reaction. The nucleosynthetic output of the subsequent phase
in stellar evolution, helium burning, is controlled by the
12C({\alpha},{\gamma})16O reaction.
In order to properly interpret the existing and upcoming solar neutrino data,
precise nuclear physics information is needed. For nuclear reactions between
light, stable nuclei, the best available technique are experiments with small
ion accelerators in underground, low-background settings. The pioneering work
in this regard has been done by the LUNA collaboration at Gran Sasso/Italy,
using a 0.4 MV accelerator.
The present contribution reports on a higher-energy, 5.0 MV, underground
accelerator in the Felsenkeller underground site in Dresden/Germany. Results
from {\gamma}-ray, neutron, and muon background measurements in the
Felsenkeller underground site in Dresden, Germany, show that the background
conditions are satisfactory for nuclear astrophysics purposes. The accelerator
is in the commissioning phase and will provide intense, up to 50{\mu}A, beams
of 1H+, 4He+ , and 12C+ ions, enabling research on astrophysically relevant
nuclear reactions with unprecedented sensitivity.Comment: Submitted to the Proceedings of the 5th International Solar Neutrino
Conference, Dresden/Germany, 11-14 June 2018, to appear on World Scientific
-- updated version (Figure 2 and relevant discussion updated, co-author A.
Domula added
Dynamic proteomic profiling of a unicellular cyanobacterium Cyanothece ATCC51142 across light-dark diurnal cycles
<p>Abstract</p> <p>Background</p> <p>Unicellular cyanobacteria of the genus <it>Cyanothece </it>are recognized for their ability to execute nitrogen (N<sub>2</sub>)-fixation in the dark and photosynthesis in the light. An understanding of these mechanistic processes in an integrated systems context should provide insights into how <it>Cyanothece </it>might be optimized for specialized environments and/or industrial purposes. Systems-wide dynamic proteomic profiling with mass spectrometry (MS) analysis should reveal fundamental insights into the control and regulation of these functions.</p> <p>Results</p> <p>To expand upon the current knowledge of protein expression patterns in <it>Cyanothece </it>ATCC51142, we performed quantitative proteomic analysis using partial ("unsaturated") metabolic labeling and high mass accuracy LC-MS analysis. This dynamic proteomic profiling identified 721 actively synthesized proteins with significant temporal changes in expression throughout the light-dark cycles, of which 425 proteins matched with previously characterized cycling transcripts. The remaining 296 proteins contained a cluster of proteins uniquely involved in DNA replication and repair, protein degradation, tRNA synthesis and modification, transport and binding, and regulatory functions. Functional classification of labeled proteins suggested that proteins involved in respiration and glycogen metabolism showed increased expression in the dark cycle together with nitrogenase, suggesting that N<sub>2</sub>-fixation is mediated by higher respiration and glycogen metabolism. Results indicated that <it>Cyanothece </it>ATCC51142 might utilize alternative pathways for carbon (C) and nitrogen (N) acquisition, particularly, aspartic acid and glutamate as substrates of C and N, respectively. Utilization of phosphoketolase (PHK) pathway for the conversion of xylulose-5P to pyruvate and acetyl-P likely constitutes an alternative strategy to compensate higher ATP and NADPH demand.</p> <p>Conclusion</p> <p>This study provides a deeper systems level insight into how <it>Cyanothece </it>ATCC51142 modulates cellular functions to accommodate photosynthesis and N<sub>2</sub>-fixation within the single cell.</p
First direct limit on the 334 keV resonance strength in the Ne({\alpha},{\gamma})Mg reaction
In stars, the fusion of Ne and He may produce either Mg,
with the emission of a neutron, or Mg and a ray. At high
temperature, the () channel dominates, while at low temperature, it
is energetically hampered. The rate of its competitor, the
Ne(,)Mg reaction, and, hence, the minimum
temperature for the () dominance, are controlled by many nuclear
resonances. The strengths of these resonances have hitherto been studied only
indirectly. The present work aims to directly measure the total strength of the
resonance at _{r}334keV (corresponding to
_{x}10949keV in Mg). The data reported here have been
obtained using high intensity He beam from the INFN LUNA 400 kV
underground accelerator, a windowless, recirculating, 99.9% isotopically
enriched Ne gas target, and a 4 bismuth germanate summing
-ray detector. The ultra-low background rate of less than 0.5
counts/day was determined using 67 days of no-beam data and 7 days of
He beam on an inert argon target. The new high-sensitivity setup
allowed to determine the first direct upper limit of 4.010
eV (at 90% confidence level) for the resonance strength. Finally, the
sensitivity of this setup paves the way to study further
Ne(,)Mg resonances at higher energy.Comment: Submitted to Eur. Phys. J.
BALL - biochemical algorithms library 1.3
<p>Abstract</p> <p>Background</p> <p>The Biochemical Algorithms Library (BALL) is a comprehensive rapid application development framework for structural bioinformatics. It provides an extensive C++ class library of data structures and algorithms for molecular modeling and structural bioinformatics. Using BALL as a programming toolbox does not only allow to greatly reduce application development times but also helps in ensuring stability and correctness by avoiding the error-prone reimplementation of complex algorithms and replacing them with calls into the library that has been well-tested by a large number of developers. In the ten years since its original publication, BALL has seen a substantial increase in functionality and numerous other improvements.</p> <p>Results</p> <p>Here, we discuss BALL's current functionality and highlight the key additions and improvements: support for additional file formats, molecular edit-functionality, new molecular mechanics force fields, novel energy minimization techniques, docking algorithms, and support for cheminformatics.</p> <p>Conclusions</p> <p>BALL is available for all major operating systems, including Linux, Windows, and MacOS X. It is available free of charge under the Lesser GNU Public License (LPGL). Parts of the code are distributed under the GNU Public License (GPL). BALL is available as source code and binary packages from the project web site at <url>http://www.ball-project.org</url>. Recently, it has been accepted into the debian project; integration into further distributions is currently pursued.</p
The study of atmospheric ice-nucleating particles via microfluidically generated droplets
Ice-nucleating particles (INPs) play a significant role in the climate and hydrological cycle by triggering ice formation in supercooled clouds, thereby causing precipitation and affecting cloud lifetimes and their radiative properties. However, despite their importance, INP often comprise only 1 in 10Âłâ10ⶠambient particles, making it difficult to ascertain and predict their type, source, and concentration. The typical techniques for quantifying INP concentrations tend to be highly labour-intensive, suffer from poor time resolution, or are limited in sensitivity to low concentrations. Here, we present the application of microfluidic devices to the study of atmospheric INPs via the simple and rapid production of monodisperse droplets and their subsequent freezing on a cold stage. This device offers the potential for the testing of INP concentrations in aqueous samples with high sensitivity and high counting statistics. Various INPs were tested for validation of the platform, including mineral dust and biological species, with results compared to literature values. We also describe a methodology for sampling atmospheric aerosol in a manner that minimises sampling biases and which is compatible with the microfluidic device. We present results for INP concentrations in air sampled during two field campaigns: (1) from a rural location in the UK and (2) during the UKâs annual Bonfire Night festival. These initial results will provide a route for deployment of the microfluidic platform for the study and quantification of INPs in upcoming field campaigns around the globe, while providing a benchmark for future lab-on-a-chip-based INP studies
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