The Tandem CARDs of NOD2: Intramolecular Interactions and Recognition of RIP2

Caspase recruitment domains (CARDs) are homotypic protein interaction modules that link the stimulus-dependent assembly of large signaling platforms such as inflammasomes to the activation of downstream effectors that often include caspases and kinases and thereby play an important role in the regulation of inflammatory and apoptotic signaling pathways. NOD2 belongs to the NOD-like (NLR) family of intracellular pattern recognition receptors (PRR) and induces activation of the NF-κB pathway in response to the recognition of bacterial components. This process requires the specific recognition of the CARD of the protein kinase RIP2 by the tandem CARDs of NOD2. Here we demonstrate that the tandem CARDs of NOD2 are engaged in an intramolecular interaction that is important for the structural stability of this region. Using a combination of ITC and pull-down experiments we identify distinct surface areas that are involved in the intramolecular tandem CARD interaction and the interaction with the downstream effector RIP2. Our findings indicate that while CARDa of NOD2 might be the primary binding partner of RIP2 the two CARDs of NOD2 do not act independently of one another but may cooperate to from a binding surface that is distinct from that of single CARDs

Evaluation of Nod-Like Receptor (NLR) Effector Domain Interactions

Members of the Nod-like receptor (NLR) family recognize intracellular pathogens and recruit a variety of effector molecules, including pro-caspases and kinases, which in turn are implicated in cytokine processing and NF-κB activation

Sexual dysfunctional beliefs in relationship with shyness among young adults

The present study deals with exploring the relationship between shyness and dysfunctional beliefs among young adults. A total of 400 young adults of the age 18 to 25 years (200 males and 200 females) were selected a simple random sampling technique, was drawn from in and around Mysore City. They were administered multidimensional dysfunctional belief developed by Nobre and Gouveia (2003), and shyness assessment test-SAT developed by D'Souza (2006). To find out the mutual relationship between domains of sexual dysfunctional belief and domains of shyness, Pearson's product moment method was applied. Results revealed that sexual dysfunctional beliefs and shyness and significantly and positively related to each other more for male respondents than female respondents. Specifically sexual conservatism, sexual desire and pleasure as a sin, body-image beliefs, denying affection primacy and total dysfunctional beliefs were significantly and positively related to shyness among female respondents. In the case of male respondents only total dysfunctional belief scores were significantly and positively to shyness

Intrinsic halotolerance of the psychrophilic alpha-amylase from Pseudoalteromonas haloplanktis

The halotolerance of a cold adapted alpha-amylase from the psychrophilic bacterium Pseudoalteromonas haloplanktis (AHA) was investigated. AHA exhibited hydrolytic activity over a broad range of NaCl concentrations (0.01-4.5 M). AHA showed 28% increased activity in 0.5-2.0 M NaCl compared to that in 0.01 M NaCl. In contrast, the corresponding mesophilic (Bacillus amyloliquefaciens) and thermostable (B. licheniformis) alpha-amylases showed a 39 and 46% decrease in activity respectively. Even at 4.5 M NaCl, 80% of the initial activity was detected for AHA, whereas the mesophilic and thermostable enzymes were inactive. Besides an unaltered fluorescence emission and secondary structure, a 10 degrees C positive shift in the temperature optimum, a stabilization factor of > 5 for thermal inactivation and a Delta T-m of 8.3 degrees C for the secondary structure melting were estimated in 2.7 M NaCl. The higher activation energy, half-life time and T-m indicated reduced conformational dynamics and increased rigidity in the presence of higher NaCl concentrations. A comparison with the sequences of other halophilic alpha-amylases revealed that AHA also contains higher proportion of small hydrophobic residues and acidic residues resulting in a higher negative surface potential. Thus, with some compromise in cold activity, psychrophilic adaptation has also manifested halotolerance to AHA that is comparable to the halophilic enzymes

Assessment of <i>crtRB1</i> Polymorphism Associated with Increased <b>β</b>-Carotene Content in Maize (<i>Zea mays</i> L.) Seeds

<div><p>Breeding for increasing β-carotene levels in maize (<i>Zea mays</i> L.) kernel aims to address the dietary vitamin A deficiency. Due to 3’TE polymorphism, the <i>crtRB1</i>gene (that encodes β<i>-carotene hydroxylase 1</i>) exists in the three allelic forms, <i>viz.,</i> 3’TE allele 1 (termed favorable allele, for it favors higher β-carotene accumulation in kernels), 3’TE allele 2 and 3’TE allele 3 (both termed unfavorable alleles, for they do not favor β-carotene accumulation). Here, we aimed to identify maize lines with favorable allele. First, 3’TE polymorphism assay in 210 inbreds revealed that only “UMI 176” had the favorable allele while the rest had the unfavorable alleles, confirming the previous finding that favorable allele is rare in frequency. Second, β-carotene content analysis in 24 inbreds revealed that it varied from 4.5 to 7.92 (μg/g), 0.23 to 2, and 0.42 to 4.22 for lines with allele 1, 2, and 3 respectively, corroborating the previous findings that the presence of favorable allele correlates with higher β-carotene content. In summary, UMI 176 has the favorable allele and had the highest amount of β-carotene content (7.92 μg/g), indicating that it is a promising donor line that can be utilized in β-carotene biofortification breeding.</p> </div