Au@h-Al2O3 Analogic Yolk–Shell Nanocatalyst for Highly Selective Synthesis of Biomass-Derived D-xylonic Acid via Regulation of Structure Effects

Selective oxidation of biomass-based monosaccharides into value-added sugar acids is highly desired, but limited success of producing D-xylonic acid has been achieved. Herein, we report an efficient catalyst system, viz., Au nanoparticles anchored on the inner walls of hollow Al2O3 nanospheres (Au@h- Al2O3), which could catalyze the selective oxidation of D-xylose into D-xylonic acid under base-free conditions. The mesoporous Al2O3 shell as the adsorbent first adsorbed D-xylose. Then, the interface of Au nanoparticles and Al2O3 as active sites spontaneously dissociated O2, and the exposed Au nanoparticle surface as the catalytic site drove the transformation. With this catalyst system, the valuable D-xylonic acid was produced with excellent yields in the aerobic oxidation of D-xylose. Extensive investigation showed that Au@h- Al2O3 is an efficient catalyst with high stability and recyclability

Special crop research grand (SCRG) - MnDRIVE potato biocontrol 2014 experiment

This is the sequencing data for characterizing the soil microbiomes (fungal and bacterial communties) following the application of bacterial inoculations as biocontrols of potato tuber disease. The archived files are raw sequencing data. The detailed processing pipeline will be included in the incoming peer reviewed paper

Original Article. Geographic distribution of Fusarium culmorum chemotypes associated with wheat crown rot in Iraq

Fusarium crown rot (FCR) is an important disease of wheat and other grains that has had a significant impact on cereal crop production worldwide. Fusarium species associated with FCR can also produce powerful trichothecenes mycotoxins that pose a considerable health risk to humans and animals that consume infected grains. In this study we examined Fusarium species of wheat from different regions of Iraq that showed FCR symptoms. Twenty-nine isolates were collected overall, and the marker gene translation elongation factor 1 alpha (TEF-1α) was sequenced in order to determine their taxonomic identities. All isolates were determined to be F. culmorum, and primers targeting tri-cluster genes were used in order to further characterize isolates into specific trichothecene chemotype strains. Five of the 29 isolates were determined to be the nivalenol (NIV) chemotype, while the rest of the isolates recovered were the deoxynivalenol (DON) chemotype. All DON- -type isolates produced 3Ac-DON, while the 15Ac-DON-type was not detected. The majority of the NIV-type isolates originated from wheat growing regions in the mid-latitudes of Iraq, while the DON-type isolates were recovered from areas distributed broadly across the country. To the best of our knowledge, this study is the first to report on the distribution of specific F. culmorum chemotypes from FCR diseased wheat in Iraq

Geographic distribution of Fusarium culmorum chemotypes associated with wheat crown rot in Iraq

Fusarium crown rot (FCR) is an important disease of wheat and other grains that has had a significant impact on cereal crop production worldwide. Fusarium species associated with FCR can also produce powerful trichothecenes mycotoxins that pose a considerable health risk to humans and animals that consume infected grains. In this study we examined Fusarium species of wheat from different regions of Iraq that showed FCR symptoms. Twenty-nine isolates were collected overall, and the marker gene translation elongation factor 1 alpha (TEF-1α) was sequenced in order to determine their taxonomic identities. All isolates were determined to be F. culmorum, and primers targeting tri-cluster genes were used in order to further characterize isolates into specific trichothecene chemotype strains. Five of the 29 isolates were determined to be the nivalenol (NIV) chemotype, while the rest of the isolates recovered were the deoxynivalenol (DON) chemotype. All DON- -type isolates produced 3Ac-DON, while the 15Ac-DON-type was not detected. The majority of the NIV-type isolates originated from wheat growing regions in the mid-latitudes of Iraq, while the DON-type isolates were recovered from areas distributed broadly across the country. To the best of our knowledge, this study is the first to report on the distribution of specific F. culmorum chemotypes from FCR diseased wheat in Iraq

Genomic evidence of recombination in the basidiomycete Wallemia mellicola

One of the most commonly encountered species in the small basidiomycetous sub-phylum Wallemiomycotina is Wallemia mellicola, a xerotolerant fungus with a widespread distribution. To investigate the population characteristics of the species, whole genomes of twenty-five strains were sequenced. Apart from identification of four strains of clonal origin, the distances between the genomes failed to reflect either the isolation habitat of the strains or their geographical origin. Strains from different parts of the world appeared to represent a relatively homogenous and widespread population. The lack of concordance between individual gene phylogenies and the decay of linkage disequilibrium indicated that W. mellicola is at least occasionally recombining. Two versions of a putative mating-type locus have been found in all sequenced genomes, each present in approximately half of the strains. W. mellicola thus appears to be capable of (sexual) recombination and shows no signs of allopatric speciation or specialization to specific habitats

Cedar Creek enemy removal experiment: 2013 - 2014 The effect of foliar fungicide on soil fungala microbiomes

This archive contains the sequencing data we used to characterizing the soil fungal microbiomes in the University of Minnesota Cedar Creek BigBio enemy removal experiment. For this project, we sampled soil microbiomes from control and foliar fungicide plots in both monoculture and 16 species polyculture at 2013 and 2014