21-cm signatures of residual HI inside cosmic HII regions during reionization

We investigate the impact of sinks of ionizing radiation on the reionization-era 21-cm signal, focusing on 1-point statistics. We consider sinks in both the intergalactic medium and inside galaxies. At a fixed filling factor of HII regions, sinks will have two main effects on the 21-cm morphology: (i) as inhomogeneous absorbers of ionizing photons they result in smaller and more widespread cosmic HII patches; and (ii) as reservoirs of neutral gas they contribute a non-zero 21-cm signal in otherwise ionized regions. Both effects damp the contrast between neutral and ionized patches during reionization, making detection of the epoch of reionization with 21-cm interferometry more challenging. Here we systematically investigate these effects using the latest semi-numerical simulations. We find that sinks dramatically suppress the peak in the redshift evolution of the variance, corresponding to the midpoint of reionization. As previously predicted, skewness changes sign at midpoint, but the fluctuations in the residual HI suppress a late-time rise. Furthermore, large levels of residual HI dramatically alter the evolution of the variance, skewness and power spectrum from that seen at lower levels. In general, the evolution of the large-scale modes provides a better, cleaner, higher signal-to-noise probe of reionization.Comment: Minor edits to agree with MNRAS published versio

CO line emission from galaxies in the Epoch of Reionization

We study the CO line luminosity ($L_{\rm CO}$), the shape of the CO Spectral Line Energy Distribution (SLED), and the value of the CO-to-$\rm H_2$ conversion factor in galaxies in the Epoch of Reionization (EoR). To this aim, we construct a model that simultaneously takes into account the radiative transfer and the clumpy structure of giant molecular clouds (GMCs) where the CO lines are excited. We then use it to post-process state-of-the-art zoomed, high resolution ($30\, \rm{pc}$), cosmological simulation of a main-sequence ($M_{*}\approx10^{10}\, \rm{M_{\odot}}$, $SFR\approx 100\,\rm{M_{\odot}\, yr^{-1}}$) galaxy, "Alth{\ae}a", at $z\approx6$. We find that the CO emission traces the inner molecular disk ($r\approx 0.5 \,\rm{kpc}$) of Alth{\ae}a with the peak of the CO surface brightness co-located with that of the [CII] 158$\rm \mu m$ emission. Its $L_{\rm CO(1-0)}=10^{4.85}\, \rm{L_{\odot}}$ is comparable to that observed in local galaxies with similar stellar mass. The high ($\Sigma_{gas} \approx 220\, \rm M_{\odot}\, pc^{-2}$) gas surface density in Alth{\ae}a, its large Mach number (\mach$\approx 30$), and the warm kinetic temperature ($T_{k}\approx 45 \, \rm K$) of GMCs yield a CO SLED peaked at the CO(7-6) transition, i.e. at relatively high-$J$, and a CO-to-$\rm H_2$ conversion factor $\alpha_{\rm CO}\approx 1.5 \, \rm M_{\odot} \rm (K\, km\, s^{-1}\, pc^2)^{-1}$ lower than that of the Milky Way. The ALMA observing time required to detect (resolve) at 5$\sigma$ the CO(7-6) line from galaxies similar to Alth{\ae}a is $\approx13$ h ($\approx 38$ h).Comment: 16 pages, 14 figures, accepted for publication in MNRA

A dynamical mechanism for the origin of nuclear rings

We develop a dynamical theory for the origin of nuclear rings in barred galaxies. In analogy with the standard theory of accretion discs, our theory is based on shear viscous forces among nested annuli of gas. However, the fact that gas follows non circular orbits in an external barred potential has profound consequences: it creates a region of reverse shear in which it is energetically favourable to form a stable ring which does not spread despite dissipation. Our theory allows us to approximately predict the size of the ring given the underlying gravitational potential. The size of the ring is loosely related to the location of the Inner Lindblad Resonance in the epicyclic approximation, but the predicted location is more accurate and is also valid for strongly barred potentials. By comparing analytical predictions with the results of hydrodynamical simulations, we find that our theory provides a viable mechanism for ring formation if the effective sound speed of the gas is low (\cs\lesssim1\kms), but that nuclear spirals/shocks created by pressure destroy the ring when the sound speed is high (\cs\simeq10\kms). We conclude that whether this mechanism for ring formation is relevant for real galaxies ultimately depends on the effective equation of state of the ISM. Promising confirmation comes from simulations in which the ISM is modelled using state-of-the-art cooling functions coupled to live chemical networks, but more tests are needed regarding the role of turbulence driven by stellar feedback. If the mechanism is relevant in real galaxies, it could provide a powerful tool to constrain the gravitational potential, in particular the bar pattern speed.Comment: Accepted for publication in MNRA

A homozygous contiguous gene deletion in chromosome 16p13.3 leads to autosomal recessive osteopetrosis in a Jordanian patient

Human malignant autosomal recessive osteopetrosis (ARO) is a genetically heterogeneous disorder caused by reduced bone resorption by osteoclasts. Mutations in the CLCN7 gene are responsible not only for a substantial portion of ARO patients, but also for other forms of osteopetrosis characterized by different severity and inheritance. The lack of a clear genotype/phenotype correlation makes genetic counselling a tricky issue for CLCN7-dependent osteopetrosis. Here we characterize the first homozygous interstitial deletion in 16p13.3, detected by array Comparative Genomic Hybridization (a-CGH) in an ARO patient of Jordanian origin. The deletion involved other genes beside CLCN7, while the proband displayed a classic ARO phenotype; however her early death did not allow more extensive clinical investigations. The identification of this novel genomic deletion involving a large part of the CLCN7 gene is of clinical relevance, especially in prenatal diagnosis, and suggests the possibility that this kind of mutation has been underestimated so far. This data highlights the need for alternative approaches to genetic analysis also in other ARO-causative genes