A Comparative Review of Dimension Reduction Methods in Approximate Bayesian Computation

Approximate Bayesian computation (ABC) methods make use of comparisons between simulated and observed summary statistics to overcome the problem of computationally intractable likelihood functions. As the practical implementation of ABC requires computations based on vectors of summary statistics, rather than full data sets, a central question is how to derive low-dimensional summary statistics from the observed data with minimal loss of information. In this article we provide a comprehensive review and comparison of the performance of the principal methods of dimension reduction proposed in the ABC literature. The methods are split into three nonmutually exclusive classes consisting of best subset selection methods, projection techniques and regularization. In addition, we introduce two new methods of dimension reduction. The first is a best subset selection method based on Akaike and Bayesian information criteria, and the second uses ridge regression as a regularization procedure. We illustrate the performance of these dimension reduction techniques through the analysis of three challenging models and data sets.Comment: Published in at http://dx.doi.org/10.1214/12-STS406 the Statistical Science (http://www.imstat.org/sts/) by the Institute of Mathematical Statistics (http://www.imstat.org

Adolescent BMI trajectories with clusters of physical activity and sedentary behavior: An exploratory analysis

Objective: The purpose of this study is to identify distinct body mass index (BMI) trajectories associated with weight classification, and to examine demographic characteristics and clusters of obesogenic behaviours in adolescents with these trajectories. Methods: Data were extracted from the National Institute of Child Health and Human Development Study of Early Child Care and Youth Development (n = 1,006, Grades 5–8). The independent variables were physical activity (accelerometer and child report), sports participation, television/video watching time and recreational computer use. The dependent variable was raw BMI. Growth mixture modelling, mixture modelling and independent t-test analyses were used. Results: Two distinct BMI trajectories were identified – one with the mean BMI within the Overweight–Obese classification (≥85th percentile) and the other within the healthy weight classification (5th– 84th percentile). Two clusters of physical and sedentary behaviours were identified in adolescents with the Overweight–Obese BMI trajectory. These clusters differed in the type of sedentary behaviour (computer vs. television/video). Three clusters were identified in adolescents with the Healthy Weight BMI trajectory. These clusters differed in levels of physical activity and types of sedentary behaviour. Conclusion: This study contributes to the understanding of multi-dimensional obesogenic behavioural patterns and highlights the importance of understanding types of sedentary behaviour in adolescents

Management of incidentally detected heart murmurs in dogs and cats

A dog or a cat has an incidentally detected heart murmur if the murmur is an unexpected discovery during a veterinary consultation that was not initially focused on the cardiovascular system. This document presents approaches for managing dogs and cats that have incidentally-detected heart murmurs, with an emphasis on murmur characteristics, signalment profiling, and multifactorial decision-making to choose an optimal course for a given patient

Asymmetric dimethylarginine blocks nitric oxide-mediated alcohol-stimulated cilia beating.

The airway epithelium is exposed to alcohol during drinking through direct exhalation of volatized ethanol from the bronchial circulation. Alcohol exposure leads to a rapid increase in the cilia beat frequency (CBF) of bronchial epithelial cells followed by a chronic desensitization of cilia stimulatory responses. This effect is governed in part by the nitric oxide regulation of cyclic guanosine and adenosine monophosphate-dependent protein kinases (PKG and PKA) and is not fully understood. Asymmetric dimethylarginine (ADMA), an endogenous inhibitor of nitric oxide synthase, is implicated in the pathogenesis of several pulmonary disorders. We hypothesized that the inhibition of nitric oxide synthase by ADMA blocks alcohol-stimulated increases in CBF. To test this hypothesis, ciliated primary bovine bronchial epithelial cells (BBEC) were preincubated with ADMA (100  µM) and stimulated with 100 mM ethanol. CBF was measured and PKA assayed. By 1 hr, ethanol activated PKA, resulting in elevated CBF. Both alcohol-induced PKA activation and CBF were inhibited in the presence of ADMA. ADMA alone had no effect on PKA activity or CBF. Using a mouse model overexpressing the ADMA-degrading enzyme, dimethylarginine dimethylaminohydrolase (DDAH), we examined PKA and CBF in precision-cut mouse lung slices. Alcohol-stimulated increases in lung slice PKA and CBF were temporally enhanced in the DDAH mice versus control mice

Metamorphic reworking of a high pressure–low temperature mélange along the Motagua fault, Guatemala: A record of Neocomian and Maastrichtian transpressional tectonics

The Guatemala suture zone is a major east–west left-lateral strike slip boundary that separates the North American and Caribbean plates in Guatemala. The Motagua fault, the central active strand of the suture zone, underwent two major collisional events within a system otherwise dominated by strike–slip motion. The first event is recorded by high-pressure/low temperature (HP/LT) eclogites and related rocks that occur within serpentinites both north and south of the Motagua fault. Lawsonite eclogites south of the fault are not significantly retrograded and give 40Ar/39Ar ages of 125–116 Ma and Sm–Nd mineral isochrons of 144–132 Ma. Eclogites north of the fault give similar Sm–Nd isochron ages (131–126 Ma) but otherwise differ in that they are strongly overprinted by a lower pressure assemblage and, along with associated HP/LT rocks, give much younger 40Ar/39Ar ages of 88–55 Ma indicating a later amphibolite facies metamorphic event. We propose therefore that all serpentinite hosted eclogites along the Motagua fault formed at essentially the same time in different parts of a laterally extensive Lower Cretaceous forearc subduction system, but subsequently underwent different histories. The southern assemblages were thrust southwards (present coordinates) immediately after HP metamorphism whereas the northern association was retrograded during a later collision that thrust it northward at ca. 70 Ma. They were subsequently juxtaposed opposite each other by major strike slip motion. This model implies that the HP rocks on opposing sides of the Motagua fault evolved along a plate boundary that underwent both dip slip and strike slip motion throughout the Late Cretaceous as a result of oblique convergence. The juxtaposition of a convergent and strike slip system means that HP/LT rocks within serpentinites can be found at depth along much of the modern Guatemala suture zone and its eastward extension into the northern Caribbean. Both sets of assemblages were exhumed relatively recently by the uplift of mountain ranges on both sides of the fault caused by movement along a restraining bend. Recent exhumation explains the apparently lack of offset of surface outcrops along a major strike slip fault

The accuracy of chromosomal microarray testing for identification of embryonic mosaicism in human blastocysts

A dança é uma forma ancestral de magia, invenção dos deuses que a ensinaram aos homens, diz-nos a mitologia hindu. Envolvido no mistério e movimento da dança, o dançarino pode encantar; porém, antes de tudo é preciso que encante a si mesmo. Não seria este também o caminho do professor? Fazer para si para poder fazer ou propor aos educandos, encantar-se para poder encantar; criar para poder seguir com as crianças a aventura da criação; ousar para poder encorajar? Nesta direção, a pergunta que percorre o presente artigo é assim formulada: como contribuir com o processo de encantamento dos professores, como alimentar a sensibilidade, nos percursos da formação universitária? Buscando respostas no processo de pesquisa, identifica-se na experiência com as danças circulares, tradição de diferentes povos, um profícuo caminho pelo qual aquele espaço de encantamento, de inteireza, de educação estética, igualmente, pode ser provocado