Lectin binding profiles of SSEA-4 enriched, pluripotent human embryonic stem cell surfaces

BACKGROUND: Pluripotent human embryonic stem cells (hESCs) have the potential to form every cell type in the body. These cells must be appropriately characterized prior to differentiation studies or when defining characteristics of the pluripotent state. Some developmentally regulated cell surface antigens identified by monoclonal antibodies in a variety of species and stem cell types have proven to be side chains of membrane glycolipids and glycoproteins. Therefore, to examine hESC surfaces for other potential pluripotent markers, we used a panel of 14 lectins, which were chosen based on their specificity for a variety of carbohydrates and carbohydrate linkages, along with stage specific embryonic antigen-4 (SSEA-4), to determine binding quantitation by flow cytometry and binding localization in adherent colonies by immunocytochemistry. RESULTS: Enriching cells for SSEA-4 expression increased the percentage of SSEA-4 positive cells to 98–99%. Using enriched high SSEA-4-expressing hESCs, we then analyzed the binding percentages of selected lectins and found a large variation in binding percentages ranging from 4% to 99% binding. Lycopersicon (tomato)esculetum lectin (TL), Ricinus communis agglutinin (RCA), and Concanavalin A (Con A) bound to SSEA-4 positive regions of hESCs and with similar binding percentages as SSEA-4. In contrast, we found Dolichos biflorus agglutinin (DBA) and Lotus tetragonolobus lectin (LTL) did not bind to hESCs while Phaseolus vulgaris leuco-agglutinin (PHA-L), Vicia villosa agglutinin (VVA), Ulex europaeus agglutinin (UEA), Phaseolus vulgaris erythro-agglutinin (PHA-E), and Maackia amurensis agglutinin (MAA) bound partially to hESCs. These binding percentages correlated well with immunocytochemistry results. CONCLUSION: Our results provide information about types of carbohydrates and carbohydrate linkages found on pluripotent hESC surfaces. We propose that TL, RCA and Con A may be used as markers that are associated with the pluripotent state of hESCs because binding percentages and binding localization of these lectins are similar to those of SSEA-4. Non-binding lectins, DBA and LTL, may identify differentiated cell types; however, we did not find these lectins to bind to pluripotent SSEA-4 positive hESCs. This work represents a fundamental base to systematically classify pluripotent hESCs, and in future studies these lectins may be used to distinguish differentiated hESC types based on glycan presentation that accompanies differentiation

Transcriptome coexpression map of human embryonic stem cells

BACKGROUND: Human embryonic stem (ES) cells hold great promise for medicine and science. The transcriptome of human ES cells has been studied in detail in recent years. However, no systematic analysis has yet addressed whether gene expression in human ES cells may be regulated in chromosomal domains, and no chromosomal domains of coexpression have been identified. RESULTS: We report the first transcriptome coexpression map of the human ES cell and the earliest stage of ES differentiation, the embryoid body (EB), for the analysis of how transcriptional regulation interacts with genomic structure during ES self-renewal and differentiation. We determined the gene expression profiles from multiple ES and EB samples and identified chromosomal domains showing coexpression of adjacent genes on the genome. The coexpression domains were not random, with significant enrichment in chromosomes 8, 11, 16, 17, 19, and Y in the ES state, and 6, 11, 17, 19 and 20 in the EB state. The domains were significantly associated with Giemsa-negative bands in EB, yet showed little correlation with known cytogenetic structures in ES cells. Different patterns of coexpression were revealed by comparative transcriptome mapping between ES and EB. CONCLUSION: The findings and methods reported in this investigation advance our understanding of how genome organization affects gene expression in human ES cells and help to identify new mechanisms and pathways controlling ES self-renewal or differentiation

genomic and functional profiling of human down syndrome neural progenitors implicates s100b and aquaporin 4 in cell injury

Down syndrome (DS) is caused by trisomy of chromosome 21 and is characterized by mental retardation, seizures and premature Alzheimer's disease. To examine neuropathological mechanisms giving rise to this disorder, we generated multiple human DS neural progenitor cell (NPC) lines from the 19-21 week frontal cortex and characterized their genomic and functional properties. Microarray profiling of DS progenitors indicated that increased levels of gene expression were not limited to chromosome 21, suggesting that increased expression of genes on chromosome 21 altered transcriptional regulation of a subset of genes throughout the entire genome. Moreover, many transcriptionally dysregulated genes were involved in cell death and oxidative stress. Network analyses suggested that upregulated expression of chromosome 21 genes such as S100B and amyloid precursor protein activated the stress response kinase pathways, and furthermore, could be linked to upregulation of the water channel aquaporin 4 (AQP4). We further demonstrate in DS NPCs that S100B is constitutively overexpressed, that overexpression leads to increased reactive oxygen species (ROS) formation and activation of stress response kinases, and that activation of this pathway results in compensatory AQP4 expression. In addition, AQP4 expression could be induced by direct exposure to ROS, and siRNA inhibition of AQP4 resulted in elevated levels of ROS following S100B exposure. Finally, elevated levels of S100B-induced ROS and loss of AQP4 expression led to increased programmed cell death. These findings suggest that dysregulation of chromosome 21 genes in DS neural progenitors leads to increased ROS and thereby alters transcriptional regulation of cytoprotective, non-chromosome 21 genes in response to ongoing cellular insults

Genome wide profiling of human embryonic stem cells (hESCs), their derivatives and embryonal carcinoma cells to develop base profiles of U.S. Federal government approved hESC lines

BACKGROUND: In order to compare the gene expression profiles of human embryonic stem cell (hESC) lines and their differentiated progeny and to monitor feeder contaminations, we have examined gene expression in seven hESC lines and human fibroblast feeder cells using Illumina(® )bead arrays that contain probes for 24,131 transcript probes. RESULTS: A total of 48 different samples (including duplicates) grown in multiple laboratories under different conditions were analyzed and pairwise comparisons were performed in all groups. Hierarchical clustering showed that blinded duplicates were correctly identified as the closest related samples. hESC lines clustered together irrespective of the laboratory in which they were maintained. hESCs could be readily distinguished from embryoid bodies (EB) differentiated from them and the karyotypically abnormal hESC line BG01V. The embryonal carcinoma (EC) line NTera2 is a useful model for evaluating characteristics of hESCs. Expression of subsets of individual genes was validated by comparing with published databases, MPSS (Massively Parallel Signature Sequencing) libraries, and parallel analysis by microarray and RT-PCR. CONCLUSION: we show that Illumina's bead array platform is a reliable, reproducible and robust method for developing base global profiles of cells and identifying similarities and differences in large number of samples

Soft Liquid Metal-Based Conducting Composite with Robust Electrical Durability for a Wearable Electrocardiogram Sensor

Liquid metals not only have the electrical property of conductivity, but they also have a unique characteristic of existing in a liquid state at room temperature, unlike ordinary stiff solid metals. However, in bioelectronics, the modulus matching well between a device and skin or tissue is considered very advantageous, because high-quality biological signals can be recorded. Therefore, it is possible to implement soft electronics with stable and robust electrical characteristics by using LM as a conductive liquid-state filler. In this study, we changed a type of liquid metal, Eutectic Gallium Indium (EGaIn), into a particle form via tip sonication and mixed it with a solution that dissolved Styrene-Ethylene-Butylene-Styrene (SEBS) in toluene to fabricate a composite. The EGaIn-SEBS composite has high conductivity, excellent electrical durability under mechanically harsh conditions, and a degree of modulus similar to that of bare SEBS, which is lower than that of solid-filler-based SEBS composite. Finally, we demonstrated electrocardiogram signal monitoring using an EGaIn-Alginate two-layer electrode (EATE) that was fabricated by simply coating the surface of the composite with alginate hydrogel, which demonstrates excellent performance in bioelectronics.11Nsciescopu

Skin-like transparent polymer–hydrogel hybrid pressure sensor with pyramid microstructures

© 2021 by the authors. Licensee MDPI, Basel, Switzerland.Soft biomimetic electronic devices primarily comprise an electronic skin (e-skin) capable of implementing various wearable/implantable applications such as soft human–machine inter-faces, epidermal healthcare systems, and neuroprosthetics owing to its high mechanical flexibility, tissue conformability, and multifunctionality. The conformal contact of the e-skin with living tissues enables more precise analyses of physiological signals, even in the long term, as compared to rigid electronic devices. In this regard, e-skin can be considered as a promising formfactor for developing highly sensitive and transparent pressure sensors. Specifically, to minimize the modulus mismatch at the biotic–abiotic interface, transparent-conductive hydrogels have been used as electrodes with exceptional pressing durability. However, critical issues such as dehydration and low compatibility with elastomers remain a challenge. In this paper, we propose a skin-like transparent polymer– hydrogel hybrid pressure sensor (HPS) with microstructures based on the polyacrylamide/sodium-alginate hydrogel and p-PVDF-HFP-DBP polymer. The encapsulated HPS achieves conformal contact with skin due to its intrinsically stretchable, highly transparent, widely sensitive, and anti-de-hydrative properties. We believe that the HPS is a promising candidate for a robust transparent epidermal stretchable-skin device.11Nsciescopu