Characterization of Adsorbed Molecular Water on the Surface of a Stretched Polytetrafluoroethylene Tape Analyzed by1H NMR

A single molecule often exhibits a largely different material character from a bulk matter. Although a perfluoroalkyl (Rf) compound is a representative one, many interests have mostly been devoted to the bulk character only thus far, leaving the single molecular character unclear. Recently, a new theoretical framework, stratified dipole-arrays (SDA) theory, has appeared for comprehensive understanding of Rf compounds in terms of both single and bulk systems. On this theory, a mechanically stretched polytetrafluoroethylene (PTFE) is expected to exhibit a single-molecular character having dipole-driven properties, which should attract molecular water. In the present study, a stretched PTFE tape is revealed to attract molecular water (not water droplet) in fact, and the adsorbed water molecules are highly restricted in motion by the dipole–dipole interaction studied by using 1H NMR, which agrees with the prediction by the SDA theory

Stereoisomer-dependent conversion of dinaphthothienothiophene precursor films

Soluble precursor materials of organic semiconductors are employed for fabricating solution-processable thin film devices. While the so-called precursor approach has already been tried for various organic electronic devices such as transistors and solar cells, understanding of the conversion process in the film lags far behind. Here, we report that molecular aggregation of the precursor compound significantly influences the thermal conversion reaction in the film. For this study, two stereoisomers of a dinaphthothienothiophene (DNTT) precursor that are the endo- and exo-DNTT-phenylmaleimide monoadducts are focused on. The structural change during the thermal conversion process has been investigated by a combination of infrared spectroscopy and X-ray diffraction techniques. The results show that the endo-isomer is readily converted to DNTT in the film by heating, whereas the exo-isomer exhibits no reaction at all. This reaction suppression is found to be due to the self-aggregation property of the exo-isomer accompanying the intermolecular C–H⋯O interactions. This finding shows a new direction of controlling the on-surface reaction, as well as the importance of analyzing the film structure at the initial stage of the reaction

An Origin of Complicated Infrared Spectra of Perfluoroalkyl Compounds Involving a Normal Alkyl Group

Perfluoroalkyl (Rf) compounds containing a normal alkyl group often yield highly complicated infrared (IR) spectra especially in the C–F stretching vibration (νC–F) region. To reveal the reason behind this, the IR p-polarized multiple-angle incidence resolution spectrometry (pMAIRS) is employed to measure a monolayer of CF3(CF2)9(CH2)3COOH deposited on a silicon substrate. The compound is known to spontaneously aggregate to form a molecular assembly with the closest packing, in which the molecules are oriented perpendicular to the substrate. The IR pMAIRS spectra apparently prove that the complexity of the νC–F region is due to the normal alkyl part directly connected to the Rf group because the carbons in the Rf group are vibrated as a coupled oscillator, and the oscillation of the alkyl part propagates to the Rf part along the molecular axis

Accurate Molecular Orientation Analysis Using Infrared pMAIRS Considering the Refractive Index of the Thin Film Sample

Infrared (IR) p-polarized multiple-angle incidence resolution spectrometry (pMAIRS) is a powerful tool for analyzing the molecular orientation in an organic thin film. In particular, pMAIRS works powerfully for a thin film with a highly rough surface irrespective of degree of the crystallinity. Recently, the optimal experimental condition has comprehensively been revealed, with which the accuracy of the analytical results has largely been improved. Regardless, some unresolved matters still remain. A structurally isotropic sample, for example, yields different peak intensities in the in-plane and out-of-plane spectra. In the present study, this effect is shown to be due to the refractive index of the sample film and a correction factor has been developed using rigorous theoretical methods. As a result, with the use of the correction factor, organic materials having atypical refractive indices such as perfluoroalkyl compounds (n = 1.35) and fullerene (n = 1.83) can be analyzed with high accuracy comparable to a compound having a normal refractive index of approximately 1.55. With this improved technique, we are also ready for discriminating an isotropic structure from an oriented sample having the magic angle of 54.7°

Controlling the concentration gradient in sequentially deposited bilayer organic solar cells via rubbing and annealing

We elucidate the formation mechanism of adequate vertical concentration gradients in sequentially deposited poly(3-hexylthiophene-2, 5-diyl) (P3HT) and phenyl-C61-butyric acid methyl ester (PCBM) bilayer solar cells. Using advanced analytical techniques, we clarify the origins of the enhanced photovoltaic performances of as-deposited and annealed bilayer P3HT/PCBM organic solar cells upon P3HT layer rubbing prior to PCBM deposition. Energy-dispersive X-ray spectroscopy reveals the individual effects of rubbing and annealing on the formation of adequate concentration gradients in the photoactive layers. Repetitive rubbing of P3HT strongly affects the active layer nanomorphology, forming an intermixed layer in the as-deposited devices which is retained after the annealing process. Infrared p-polarized multiple-angle incidence resolution spectrometry measurements indicate that rubbing induces a minor reorganization of the P3HT molecules in the polymer-only thin films towards face-on orientation. However, the deposition of the upper PCBM layer reverts the P3HT molecules back to their original orientation. These findings suggest that the formation of an adequate concentration gradient upon rubbing corresponds to the dominant contribution to the improved photovoltaic characteristics of rubbed bilayer organic solar cells. Using the reference low bandgap copolymer PCDTBT, we demonstrate that rubbing can be successfully applied to increase the photovoltaic performances of PCDTBT/PCBM organic solar cells. We also demonstrate that rubbing can be an efficient and versatile strategy to improve the power conversion efficiency of non-fullerene solar cells by using the reference materials in the field, PBDB-T and ITIC

Monitoring of Crystallization Process in Solution-Processed Pentacene Thin Films by Chemical Conversion Reactions

Solution-processable organic semiconductors having bulky substituent groups on the π-conjugated skeleton are rapidly gaining attention for their potential applications to large-area electronics. While the substituent groups contribute to the good solubility in organic solvents, they give rise to hopping sites in a thin film, affecting adversely the charge-carrier transport. As an alternative material, a solvent-soluble precursor compound with thermally cleavable functional groups is promising, which can be converted by heat treatment into a thin film to generate the desired material consisting solely of conjugated systems. This precursor approach is practically applied to various thin-film-based devices. The overall process of the thin film growth, however, remains unrevealed. In the present study, solution-processed pentacene thin films are prepared from a thermally convertible precursor, and the structural evolution during the chemical conversion reaction has been revealed by a combination of cutting-edge analytical tools of two-dimensional X-ray diffraction (2D-GIXD) and p-polarized multiple-angle incidence resolution spectrometry (pMAIRS). The highlight is that pentacene is crystallized in a stepwise manner in the thermally converted films, which is substantially different from a typical growth process. In addition, influences of the oxidation reaction of pentacene on the molecular arrangement are also discussed quantitatively. This study provides a fundamental schematic of thin films grown by the precursor method

Supramolecular double-stranded Archimedean spirals and concentric toroids

Connecting molecular-level phenomena to larger scales and, ultimately, to sophisticated molecular systems that resemble living systems remains a considerable challenge in supramolecular chemistry. To this end, molecular self-assembly at higher hierarchical levels has to be understood and controlled. Here, we report unusual self-assembled structures formed from a simple porphyrin derivative. Unexpectedly, this formed a one-dimensional (1D) supramolecular polymer that coiled to give an Archimedean spiral. Our analysis of the supramolecular polymerization by using mass-balance models suggested that the Archimedean spiral is formed at high concentrations of the monomer, whereas other aggregation types might form at low concentrations. Gratifyingly, we discovered that our porphyrin-based monomer formed supramolecular concentric toroids at low concentrations. Moreover, a mechanistic insight into the self-assembly process permitted a controlled synthesis of these concentric toroids. This study both illustrates the richness of self-assembled structures at higher levels of hierarchy and demonstrates a topological effect in noncovalent synthesis

The genome landscape of indigenous African cattle

Background: The history of African indigenous cattle and their adaptation to environmental and human selection pressure is at the root of their remarkable diversity. Characterization of this diversity is an essential step towards understanding the genomic basis of productivity and adaptation to survival under African farming systems. Results: We analyze patterns of African cattle genetic variation by sequencing 48 genomes from five indigenous populations and comparing them to the genomes of 53 commercial taurine breeds. We find the highest genetic diversity among African zebu and sanga cattle. Our search for genomic regions under selection reveals signatures of selection for environmental adaptive traits. In particular, we identify signatures of selection including genes and/ or pathways controlling anemia and feeding behavior in the trypanotolerant N’Dama, coat color and horn development in Ankole, and heat tolerance and tick resistance across African cattle especially in zebu breeds. Conclusions: Our findings unravel at the genome-wide level, the unique adaptive diversity of African cattle while emphasizing the opportunities for sustainable improvement of livestock productivity on the continent

¹H NMR analysis of water freezing in nanospace involved in a nafion membrane

Water involved in a polyelectrolyte membrane of Nafion has recently been revealed to comprise three distinctive molecular species with respect to molecular motion correlated with the hydrogen bonding structure by using 1H NMR, infrared, and mass spectrometries. The three species are assigned to the condensed water, hydration water, and strongly bounded water on the sulfonic acid group. In the present study, on the contrary to an expectation on this schematic, even the condensed water is found unfrozen when the membrane is cooled down to -50 °C, and a freezing begins when it is cooled down to -60 °C or lower. Two-thirds of the condensed water remains unfrozen even at -80 °C, which is attributed to the effect of nanospace where the water molecules are too short to construct the ice-like structure. The reduction of rotational motion of water is, on the other hand, commonly found for all the water species revealed via the calculation of the activation energies

Second Generation of Multiple-Angle Incidence Resolution Spectrometry

Infrared surface spectroscopic techniques commonly have long-term issues that (1) the multiple reflections of light in the substrate yield optical interference fringes in the absorption spectrum and (2) the double modulation of light at the interferometer in a Fourier transform infrared spectrometer makes the water-vapor subtraction impossible. These measurement troubles often disturb the quantitative analysis of chemical bands of the analyte thin film. Multiple-angle incidence resolution spectrometry (MAIRS) is not an exception in this matter, either. In the present study, the long-term common issues have first been resolved by fixing the angle of incidence at a large angle, whereas the polarization angle is changed. With this simple conceptual change of MAIRS, as a result, we are ready for concentrating on spectral analysis only without concerning about the measurement troubles