15 research outputs found
On the Burstiness of Distributed Machine Learning Traffic
Traffic from distributed training of machine learning (ML) models makes up a
large and growing fraction of the traffic mix in enterprise data centers. While
work on distributed ML abounds, the network traffic generated by distributed ML
has received little attention. Using measurements on a testbed network, we
investigate the traffic characteristics generated by the training of the
ResNet-50 neural network with an emphasis on studying its short-term
burstiness. For the latter we propose metrics that quantify traffic burstiness
at different time scales. Our analysis reveals that distributed ML traffic
exhibits a very high degree of burstiness on short time scales, exceeding a
60:1 peak-to-mean ratio on time intervals as long as 5~ms. We observe that
training software orchestrates transmissions in such a way that burst
transmissions from different sources within the same application do not result
in congestion and packet losses. An extrapolation of the measurement data to
multiple applications underscores the challenges of distributed ML traffic for
congestion and flow control algorithms
pyRBDome: a comprehensive computational platform for enhancing RNA-binding proteome data
High-throughput proteomics approaches have revolutionised the identification of RNA-binding proteins (RBPome) and RNA-binding sequences (RBDome) across organisms. Yet, the extent of noise, including false positives, associated with these methodologies, is difficult to quantify as experimental approaches for validating the results are generally low throughput. To address this, we introduce pyRBDome, a pipeline for enhancing RNA-binding proteome data in silico. It aligns the experimental results with RNA-binding site (RBS) predictions from distinct machine-learning tools and integrates high-resolution structural data when available. Its statistical evaluation of RBDome data enables quick identification of likely genuine RNA-binders in experimental datasets. Furthermore, by leveraging the pyRBDome results, we have enhanced the sensitivity and specificity of RBS detection through training new ensemble machine-learning models. pyRBDome analysis of a human RBDome dataset, compared with known structural data, revealed that although UVâcross-linked amino acids were more likely to contain predicted RBSs, they infrequently bind RNA in high-resolution structures. This discrepancy underscores the limitations of structural data as benchmarks, positioning pyRBDome as a valuable alternative for increasing confidence in RBDome datasets.All the code and data analysis results are available from our GitLab repository (https://git.ecdf.ed.ac.uk/sgrannem) without restrictions. All the prediction and ground truth analysis results can be found on the repositories starting with pyRBDome-Notebooks. The pyRBDome-Core repository contains all the code required to run the pyRBDome-Notebooks Jupyter notebook files. The results of all the analyses are also available as Microsoft Excel spreadsheets in Tables S2, S3, S4, and S5
Preparation and performance analysis of polyamide-based rapid repair material for asphalt pavement shallow groove
In order to effectively remedy shallow grooves on asphalt pavements, this study presents an innovative solution, termed Polyamide-based Asphalt Pavement Shallow Groove Rapid Repair Material (PA-SGRRM). This material employs polyamide 6 (PA6) as the matrix resin, in conjunction with polypropylene (PP), ethylene-vinyl acetate copolymer (EVA), and maleic anhydride-grafted polyethylene-octene copolymer (POE-g-MAH). It is manufactured through an extrusion granulation process. At the outset, a molecular dynamics approach was employed to assess the compatibility of the primary constituents and the adhesion between the matrix resin and asphalt, confirming the rationale behind the material selection. Subsequently, the orthogonal experimental design method was utilized to investigate the influence of design parameters (POE-g-MAH content, PP content, and EVA content) on the flexural strength, tensile strength, low-temperature toughness, and melt flow rate of PA-SGRRM. Following this, we prepared samples with the optimal proportions of EVA and POE-g-MAH and conducted a separate analysis to evaluate the impact of PP on the saturated moisture content of PA-SGRRM. Finally, we employed Scanning electron microscopy (SEM) to observe the microstructures of the low-temperature fracture surface and ambient temperature tensile fracture surface of the PA-SGRRM and employed Fourier transform infrared spectroscopy (FTIR) to deduce the primary chemical reactions occurring within the PA-SGRRM. The results demonstrated that POE-g-MAH played a crucial role in enhancing the compatibility of the simulated hybrid system consisting of PP and PA6. Additionally, it was observed that adhesion between PA6 and asphalt existed, with a gradual decrease as temperature rose. The content of POE-g-MAH and PP were the two primary parameters influencing the performance of PA-SGRRM. POE-g-MAH exerted a significant adverse impact on the flexural strength, tensile strength, and melt flow rate of PA-SGRRM, while substantially improving its low-temperature toughness. The PP positively reduced the water absorption characteristics of PA-SGRRM. Based on the experimental results, the optimal combination of design parameters for PA-SGRRM is recommended
Preparation and microstructural and thermal properties of a vulcanized Eucommia ulmoides gum modified asphalt
In this study, a vulcanized Eucommia ulmoides gum modified asphalt (VEUGMA) was prepared using a natural plant-based renewable rubber Eucommia ulmoides gum (EUG) as the matrix. The preparation process and microstructural and thermal properties of VEUGMA were investigated. The results showed that the optimum shearing time for preparing VEUGMA was 45 min, and the optimum development time was 120 min. Moreover, the EUG dosage follows a monotonically decreasing linear relationship with the optimum sulfur dosage. The VEUGMA exhibited a preferable corrugated network structure, and the vulcanization process of EUG in asphalt can be divided into three stages: slight crosslinking, deep crosslinking, and supreme crosslinking. The X-ray diffraction pattern displayed that only new diffraction peaks of ZnO appeared in the VEUGMA, and the EUG and asphalt exhibited better compatibility under the action of vulcanization aids. After EUG was vulcanized in asphalt, the aromatic ring hydrogen in the asphalt was replaced by aliphatic chains. The VEUGMA exhibited a lower glass transition temperature that suggests a better low-temperature crack resistance. Two maximum decomposition temperatures were noted in the thermal decomposition process of VEUGMA. Moreover, the main gases released were CO2, CO, CH4, SO2, NO2, and NO; of which, CO2 and CO exhibited the highest content, whereas the inferior emissions of SO2, NO2, and NO, can be ignored. The VEUGMA can effectively reduce the release of CO2 and CO but has no significant effect on the release of CH4. Further, VEUGMA demonstrated a smaller storage modulus (E\u27), loss modulus (Eâ), and loss factor (tanδ), which suggested better flexibility at low temperatures. Therefore, this work demonstrated the preferable modification effect achieved by adding 3.5 wt% EUG and 6 phr (parts per hundred parts of resin) sulfur to the matrix asphalt
Thermoregulation, rheological properties and modification mechanism of asphalt modified with PUSSPCMs
Phase change materials (PCMs) can regulate asphalt temperature through thermal storage properties to prevent thermal damage in asphalt pavements. However, the effects of PCMs on the thermoregulation and rheological properties of asphalt require further study. In this study, polyurethane solidâsolid phase change materials (PUSSPCMs) were prepared to impart thermoregulation properties to asphalt, and the effects of PUSSPCMs on the rheological properties and microscopic characterization of asphalt were investigated. The PUSSPCMs were produced by different soft segment mass fractions (70 %, 80 %, and 90 %), and they were used to prepare modified asphalt with varying contents (3 %, 5 %, and 7 %). Thermoregulation testing system, dynamic shear rheology (DSR), bending beam rheology (BBR) tests, differential scanning calorimetry (DSC), infrared spectroscopy (FTIR), scanning electron microscopy (SEM), and atomic force microscopy (AFM) were conducted to determine the thermoregulation, rheological properties, and modification mechanism of PUSSPCM-modified asphalt, respectively. The results show that the thermoregulation property of PUSSPCM-modified asphalt improves with the increase of soft segment mass fraction and content, 7 % P90 asphalt exhibits the best thermoregulation property with the excellent delayed time (1105 s) and temperature difference (7.1 â). The high-temperature rutting resistance of the modified asphalt is enhanced by decreasing the soft segment mass fraction and increasing the content of PUSSPCMs, with the 7 % P70 being the best asphalt type. The 7 % P90 asphalt exhibits the optimum low-temperature creep performance due to a higher soft segment mass fraction. The modified asphalt may be a physical modification since no new characteristic peaks appear. With the increase of soft segment mass fraction, the PUSSPCMs in asphalt transform from elastomer to a ribbon-like structure. Furthermore, the microscopic roughness (Sq) and Young\u27s modulus of the modified asphalt decline with the increase in soft segment mass fraction and content of PUSSPCMs, implying an increase in microscopic crack resistance and a decrease in elasticity
Fabrication of Multiple Heterojunctions with Tunable Visible-Light-Active Photocatalytic Reactivity in BiOBrâBiOI Full-Range Composites Based on Microstructure Modulation and Band Structures
The fabrication of multiple heterojunctions
with tunable photocatalytic
reactivity in full-range BiOBrâBiOI composites based on microstructure
modulation and band structures is demonstrated. The multiple heterojunctions
are constructed by precipitation at room temperature and characterized
systematically. Photocatalytic experiments indicate that there are
two types of heterostructures with distinct photocatalytic mechanisms,
both of which can greatly enhance the visible-light photocatalytic
performance for the decomposition of organic pollutants and generation
of photocurrent. The large separation and inhibited recombination
of electronâhole pairs rendered by the heterostructures are
confirmed by electrochemical impedance spectra (EIS) and photoluminescence
(PL). Reactive species trapping, nitroblue tetrazolium (NBT, detection
agent of <sup>â˘</sup>O<sub>2</sub><sup>â</sup>) transformation,
and terephthalic acid photoluminescence (TA-PL) experiments verify
the charge-transfer mechanism derived from the two types of heterostructures,
as well as different enhancements of the photocatalytic activity.
This article provides insights into heterostructure photocatalysis
and describes a novel way to design and fabricate high-performance
semiconductor composites
β-arrestin 2 quenches TLR signaling to facilitate the immune evasion of EPEC
The protein translocated intimin receptor (Tir) from enteropathogenic Escherichia coli shares sequence similarity with the host cellular immunoreceptor tyrosine-based inhibition motifs (ITIMs). The ITIMs of Tir are required for Tir-mediated immune inhibition and evasion of host immune responses. However, the underlying molecular mechanism by which Tir regulates immune inhibition remains unclear. Here we demonstrated that β-arrestin 2, which is involved in the G-protein-coupled receptor (GPCR) signal pathway, interacted with Tir in an ITIM-dependent manner. For the molecular mechanism, we found that β-arrestin 2 enhanced the recruitment of SHP-1 to Tir. The recruited SHP-1 inhibited K63-linked ubiquitination of TRAF6 by dephosphorylating TRAF6 at Tyr288, and inhibited K63-linked ubiquitination and phosphorylation of TAK1 by dephosphorylating TAK1 at Tyr206, which cut off the downstream signal transduction and subsequent cytokine production. Moreover, the inhibitory effect of Tir on immune responses was diminished in β-arrestin 2-deficient mice and macrophages. These findings suggest that β-arrestin 2 is a key regulator in Tir-mediated immune evasion, which could serve as a new therapeutic target for bacterial infectious diseases
Nationalism and multilateralism in Chinese foreign policy: implications for Southeast Asia
One of Michael Leifer's main fears for the future role of ASEAN arose from the spectre of a rising nationalistic China. This article assesses whether recent developments have borne out those fears by looking at the nature of Beijing's evolving multilateral approach towards the region. Agreeing with Leifer that nationalism is an important influence on Chinese foreign policy, the article explores the complex relationship between domestic politics and the discourse of multipolarity in China to propose that multilateralism is an effective way for Beijing to increase its regional power while avoiding confrontation with the United States or regional powers like India and Japan. However, Beijing's multilateralism is still premised on hard conceptions of state sovereignty and has to be developed in the context of a nationalistic political culture that prevents the achievement of regional stability through compromise on issues such as the South China Sea disputes and the Taiwan question. China's continuing economic growth also means that its multilateralism in Southeast Asia will unavoidably be shaped by issues such as the role of the ethnic Chinese as economic bridgeheads and the realities of an increasingly asymmetrical balance of power. Meanwhile, the relative economic weakness of the Southeast Asian states also means that nature of ASEAN-style regionalism will continue to be determined by the extra-mural balance of power, with China as one of the major actors, as Michael Leifer predicted
Nanophotonic inspection of deep-subwavelength integrated optoelectronic chips
Artificial nanostructures with ultrafine and deep-subwavelength feature sizes have emerged as a paradigm-shifting platform to advanced light field management, becoming a key building block for high-performance integrated optoelectronics and flat optics. However, direct optical inspection of such integrated chips with densely packed complex and small features remains a missing metrology gap that hinders quick feedback between design and fabrications. Here, we demonstrate that photothermal nonlinear scattering microscopy can be utilized for direct imaging and resolving of integrated optoelectronic chips beyond the diffraction limit. We reveal that the inherent coupling among deep-subwavelength nanostructures supporting leaky resonances allows for the pronounced heating effect to access reversible nonlinear modulations of the confocal reflection intensity, leading to optical resolving power down to 80 nm (~lambda/7). The versatility of this approach has been exemplified by direct imaging of silicon grating couplers and metalens with a minimum critical dimension of 100 nm, as well as central processing unit (CPU) chip with 45 nm technology, unfolding the long-sought possibility of in-situ, non-destructive, high-throughput optical inspection of integrated optoelectronic chips and nanophotonic chips