112 research outputs found
High-Order Harmonic Generation from the Cu(111) surface
We investigate theoretically the origin behind the formation of the plateau and cutoff structures in the high-harmonic spectra produced after the interaction of a near-infrared laser pulse with a metal surface. We use a wave packet propagation scheme and a one dimensional description of the Cu(111) surfac
Dynamics of excited clusters of ÎČ-alanine in the gas phase
We present a theoretical study of excited clusters of ÎČ-alanine molecules in the gas phase: (ÎČ-ala)n, n=2-5. Classical molecular dynamics simulations performed for different internal excitation energies showed a thermal decomposition dependence with the cluster size. We also present an assessment study performed with different families of density functionals using the dimer, (ÎČ-ala)2 as a benchmark system. M06-2X provides the best agreement for the relative energies of 20 isomers in comparison with the reference values computed with the MP2 method. The stability and reactivity of several cluster sizes have been investigated with this functional in combination with the 6-311++G(d,p) basis se
New features in the ionic states of N2O4: Experimental and theoretical study
We present a combined experimental and theoretical study focused on the ionic states of the N2O4 molecule. Experimental results regarding photoionization induced by the synchrotron radiation SOLEIL in the 13.5-15.5 eV energy range were obtained using the electron-ion velocity vector correlation method. The potential energy curves for the dissociation of the N-N bond were computed within ab initio multireference wave functions based methods (CASSCF and CASPT2) for the first electronic states of N2O 4 and N2O4
Theoretical study of the electronic excited states in ultrathin ionic layers supported on metal surfaces: NaCl/Cu(111)
We present a theoretical study of the electronic excited states in ultrathin ionic layers supported on metal surfaces. We have studied 1, 2, 3, and 4 monolayers of NaCl on a Cu(111) surface. Energies, lifetimes, and associated wave functions of the excited states have been obtained with a joint, model potentialâwave packet
propagation approach. The excited state with the lowest energy has the character of an image potential state repelled from the surface by the NaCl layer. The next two states present a mixed character of image potential states and NaCl layer states corresponding to the quantization of the conduction band in the finite-size layer. We
discuss the role of the layer thickness in decoupling these states from the metal surface and how it affects their lifetimeS.D.-T. gratefully acknowledges postdoctoral support from the Triangle de la Physique and the Juan de la Cierva program from the Spanish Ministerio de Ciencia e InnovaciĂłn
Unveiling the anisotropic behavior of ultrafast electron transfer at the metal/organic interface
Ultrafast electron transfer between adsorbed organic molecules and metal substrates is studied. In particular, the dynamics of the active electron in the nitroethylene anion/metal-copper surface system has been followed in real time using a wave packet propagation approach, allowing a rigorous analysis of the decay of molecule-localized electronic resonances. We find that the strong coupling with the metal substrate leads to an extremely short lifetime (~1fs) of the Ïâ molecular resonance. Comparison between the free-electron metal, Cu(1 0 0), and Cu(1 1 1) surfaces demonstrates that the electronic band structure of the substrate and the shape of the decaying molecular orbital lead to a highly marked anisotropy of the metal continuum states populated by resonant electron transfer from the adsorbate. This finding points at possible anisotropy effects in adsorbateâadsorbate interactions and it is of particular importance in molecular self assembly at metal surfaces, thus opening the way to a rational design of hybrid metal/organic interfaces with tailored electronic propertiesThis work was partially supported by the MICINN - Spanish Ministry of Science and Innovation - projects CTQ2016-76061-P and PID2019-110091 GB-I00, and the âMarĂa de Maeztuâ (CEX2018- 000805-M) Program for Centers of Excellence in R&
Tracing photoinduced hydrogen migration in alcohol dications from time-resolved molecular-frame photoelectron angular distributions
ArtĂculo escrito por un elevado nĂșmero de autores, solo se referencian el que aparece en primer lugar, el nombre del grupo de colaboraciĂłn, si le hubiere, y los autores pertenecientes a la UAMThe recent implementation of attosecond and fewfemtosecond X-ray pump/X-ray probe schemes in large-scale freeelectron laser facilities has opened the way to visualize fast nuclear dynamics in molecules with unprecedented temporal and spatial resolution. Here, we present the results of theoretical calculations showing how polarization-averaged molecular-frame photoelectron angular distributions (PA-MFPADs) can be used to visualize the dynamics of hydrogen migration in methanol, ethanol, propanol, and isopropyl alcohol dications generated by X-ray irradiation of the corresponding neutral species. We show that changes in the PA-MFPADs with the pumpâprobe delay as a result of intramolecular photoelectron diffraction carry information on the dynamics of hydrogen migration in real space. Although visualization of this dynamics is more straightforward in the smaller systems, methanol and ethanol, one can still recognize the signature of that motion in propanol and isopropyl alcohol and assign a tentative path to it. A possible pathway for a corresponding experiment requires an angularly resolved detection of photoelectrons in coincidence with molecular fragment ions used to define a molecular frame of reference. Such studies have become, in principle, possible since the first XFELs with sufficiently high repetition rates have emerged. To further support our findings, we provide experimental evidence of H migration in ethanolâOD from ionâ ion coincidence measurements performed with synchrotron radiationPID2019-105458RB-I00, PID2022-138470NB-I00, SEV-2016-068
Ultrafast dynamics of electronic resonances in molecules adsorbed on metal surfaces: a wave packet propagation approach
We present a wave packet propagation-based method to study the electron dynamics in molecular species in the gas phase and adsorbed on metal surfaces. It is a very general method that can be employed to any system where the electron dynamics is dominated by an active electron and the coupling between the discrete and continuum electronic states is of importance. As an example, one can consider resonant molecule-surface electron transfer or molecular photoionization. Our approach is based on a computational strategy allowing incorporating ab initio inputs from quantum chemistry methods, such as density functional theory, Hartree-Fock, and coupled cluster. Thus, the electronic structure of the molecule is fully taken into account. The electron wave function is represented on a three-dimensional grid in spatial coordinates, and its temporal evolution is obtained from the solution of the time-dependent Schrödinger equation. We illustrate our method with an example of the electron dynamics of anionic states localized on organic molecules adsorbed on metal surfaces. In particular, we study resonant charge transfer from the I orbitals of three vinyl derivatives (acrylamide, acrylonitrile, and acrolein) adsorbed on a Cu(100) surface. Electron transfer between these lowest unoccupied molecular orbitals and the metal surface is extremely fast, leading to a decay of the population of the molecular anion on the femtosecond timescale. We detail how to analyze the time-dependent electronic wave function in order to obtain the relevant information on the system: The energies and lifetimes of the molecule-localized quasistationary states, their resonant wavefunctions, and the population decay channels. In particular, we demonstrate the effect of the electronic structure of the substrate on the energy and momentum distribution of the hot electrons injected into the metal by the decaying molecular resonanceThis work was partially supported by the MICINN-Spanish Ministry of Science and Innovation-projects CTQ2016-76061-P and PID2019-110091GBI00 and the âMarĂa de Maeztuâ (CEX2018-000805-M) Program for Centers of Excellence in R&
Catalytic asymmetric synthesis of diazabicyclo[3.1.0]hexanes by 1,3-dipolar cycloaddition of azomethine ylides with azirines
Substituted 1,3-diazabicyclo[3.1.0]hexanes with two contiguous quaternary stereocentres are readily prepared by catalytic asymmetric [3+2] cycloaddition of α-substituted iminoesters with azirines. High diastereoselectivities and enantioselectivities (up to 98% ee) are achieved using CuI/(R)-Fesulphos as the catalytic systemWe thank the Spanish Ministerio de EconomĂa, Industria y Competitividad (Grant CTQ2015-66954-P, MINECO/FEDER, UE) and FEDER/Ministerio de Ciencia, InnovaciĂłn y Universidades â Agencia Estatal de InvestigaciĂłn (Grant PGC2018-098660-B-I00) for financial suppor
Intramolecular and intermolecular hole delocalization rules the reducer character of isolated nucleobases and homogeneous single-stranded DNA
The use of DNA strands as nanowires or electrochemical biosensors requires a deep understanding of charge transfer processes along the strand, as well as of the redox properties. These properties are computationally assessed in detail throughout this study. By applying molecular dynamics and hybrid QM/continuum and QM/QM/continuum schemes, the vertical ionization energies, adiabatic ionization energies, vertical attachment energies, one-electron oxidation potentials, and delocalization of the hole generated upon oxidation have been determined for nucleobases in their free form and as part of a pure single-stranded DNA. We show that the reducer ability of the isolated nucleobases is explained by the intramolecular delocalization of the positively charged hole, while the enhancement of the reducer character when going from aqueous solution to the strand correlates very well with the intermolecular hole delocalization. Our simulations suggest that the redox properties of DNA strands can be tuned by playing with the balance between intramolecular and intermolecular charge delocalizationThis work was partially supported by
the MICINN â Spanish Ministry of Science and Innovation â
Projects PID2019-110091GB-I00 and PID2020-117806GA-I00
funded by MCIN/AEI/10.13039/501100011033, and the âMarĂa
de Maeztuâ (CEX2018-000805-M) Program for Centers of Excellence in R & D. J. J. N. acknowledge the Comunidad de Madrid
for funding through the Attraction of Talent Program (Grant ref.2018-T1/BMD-10261). J. L. T. acknowledges the FPU19/02292
grant from the Spanish Ministry of Universit
An Efficient Multilayer Approach to Model DNA-Based Nanobiosensors
In this work, we present a full computational protocol to successfully obtain the one-electron reduction potential of nanobiosensors based on a self-assembled monolayer of DNA nucleobases linked to a gold substrate. The model is able to account for conformational sampling and environmental effects at a quantum mechanical (QM) level efficiently, by combining molecular mechanics (MM) molecular dynamics and multilayer QM/MM/continuum calculations within the framework of Marcus theory. The theoretical model shows that a guanine-based biosensor is more prone to be oxidized than the isolated nucleobase in water due to the electrostatic interactions between the assembled guanine molecules. In addition, the redox properties of the biosensor can be tuned by modifying the nature of the linker that anchor the nucleobases to the metal supportThis work was partially
supported by the MICINN â Spanish Ministry of Science and
Innovation â Project Nos. PID2019-110091GB-I00 and
PID2020-117806GA-I00, funded by MCIN/AEI/10.13039/
501100011033, and the âMarĂa de Maeztuâ (No. CEX2018-
000805-M) Program for Centers of Excellence in R&D. J.J.N.
acknowledge the Comunidad de Madrid for funding through
the Attraction of Talent Program (Grant Ref. No. 2018-T1/
BMD-10261). J.L.T. acknowledges the FPU-2019 grant from
the Spanish Ministry of Universit
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