8 research outputs found
Autopiquer - a robust and reliable peak detection algorithm for mass spectrometry
- Author
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- 06/12/2016
- Field of study
We present a simple algorithm for robust and unsupervised peak detection by determining a noise threshold in isotopically resolved mass spectrometry data. Solving this problem will greatly reduce the subjective and time consuming manual picking of mass spectral peaks and so will prove beneficial in many research applications. The Autopiquer approach uses autocorrelation to test for the presence of (isotopic) structure in overlapping windows across the spectrum. Within each window, a noise threshold is optimized to remove the most unstructured data whilst keeping as much of the (isotopic) structure as possible. This algorithm has been successfully demonstrated for both peak detection and spectral compression on data from many different classes of mass spectrometer and for different sample types and this approach should also be extendible to other types of data that contain regularly spaced discrete peaks
Robust MS quantification method for phospho-peptides using 18O/16O labeling
- Author
- A Ramos-Fernandez
- Andreas Kremer
- B Efron
- CJ Mason
- Claus A Andersen
- CS Lane
- DM Horn
- E Mandelkow
- Georg C Terstappen
- H Tang
- JE Eckel-Passow
- JR Smith
- KL Johnson
- Letizia Magnoni
- M Heller
- M Miyagi
- MWBSCaMFW Senko
- OA Mirgorodskaya
- R Raggiaschi
- R Williamson
- Roberto Raggiaschi
- RS Ozer
- S Chatterjee
- S Korbel
- Stefano Gotta
- VA Petyuk
- X Yao
- Publication venue
- BioMed Central
- Publication date
- 01/01/2009
- Field of study
Beam Test Results on Operated in Avalanche Mode RPCs obtained in April 1996 with the IHEP Accelerator 117
- Publication venue
- Publication date
- 23/05/1996
- Field of study
Big genomics and clinical data analytics strategies for precision cancer prognosis
- Author
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
Nitrite reduction by Fe(II) associated with kaolinite
- Author
- A Beauvais
- A Neumann
- AL Foster
- B Krause
- B Wehrli
- C Liu
- CD Obuekwe
- CJ Matocha
- CJ Matocha
- D Soltermann
- DA Jefferson
- DC Golden
- DF Shriver
- EA Davidson
- F Picardal
- FJ Millero
- GW Luther III
- HCB Hansen
- J Klausen
- J Sorensen
- JE Amonette
- JK Frederickson
- JM Alowitz
- JM Senko
- JM Zachara
- JM Zachara
- JT Moraghan
- LG Kennedy
- LL Stookey
- N Klueglein
- OV Cleemput
- P Dhakal
- PM Bertsch
- R Yan
- RK Kukkadapu
- S Rakshit
- S Vaclavkova
- TJ DiChristina
- VA Samarkin
- W Stumm
- W Stumm
- Y Komatsu
- Y-L Tai
- Publication venue
- 'Springer Science and Business Media LLC'
- Publication date
- Field of study
ALICE: Physics Performance Report, Volume II
- Author
- Adamova D
- Adler C
- Aggarwal MM
- Ahammed Z
- Ahmad N
- Ahmad S
- Ahmad T
- Aiftimieri C
- Akichine PG
- Akindinov AN
- Aleksandrov D
- Alessandro B
- Alessandro B
- Alici A
- Alme J
- Andronic A
- Anelli G
- Anfreville M
- Angelov TAV
- Anticic T
- Antinori F
- Antinori F
- Antinori S
- Antonczyk D
- Antonenko V
- Antoniolo P
- Aphecetche L
- Appelshauser H
- Arcelli S
- Arefiev VA
- Arleo F
- Armesto N
- Arnaldi R
- Asryan AG
- Atanassov I
- Atayan M
- Augustin I
- Augustinus A
- Aurenche P
- Awes T
- Ayala A
- Aysto J
- Baatar T
- Bablok S
- Badala A
- Badura E
- Badyal SK
- Baechler J
- Bagnasco S
- Bailhache R
- Baillie OV
- Baillie OV
- Bala R
- Baldisseri A
- Baldit A
- Ban J
- Barbera R
- Bari G
- Bari W
- Barnafoldi G
- Barret V
- Bartke J
- Basciu S
- Basile M
- Basmanov V
- Bastid N
- Batigne G
- Batiounia BV
- Baudot J
- Baumann C
- Bearden I
- Becker B
- Beitlerova A
- Belbute BFC
- Beliaev S
- Belikov JA
- Belikov JA
- Belogianni A
- Benhabib L
- Beole S
- Berdermann E
- Berdnikov Y
- Berny R
- Betev L
- Bhasin A
- Bhaskar P
- Bhati AK
- Bhattacharya P
- Bimbot L
- Blanchard G
- Blank T
- Blume C
- Blume C
- Boccardi A
- Bochek GL
- Bogdanov A
- Boggild H
- Bogolyubsky MY
- Boldizsar L
- Bombara M
- Bondila M
- Bonnes U
- Bonnet D
- Bonvicini V
- Borel H
- Borghini N
- Borshchov VN
- Borysov O
- Bose S
- Bosisio L
- Botje M
- Bouvier S
- Branco P
- Braun MA
- Braun Munzinger P
- Bravina L
- Bregant M
- Brun R
- Bruna E
- Bruno GE
- Budnikov D
- Buncic P
- Burns M
- Busch O
- Buskop JJF
- Cai X
- Cali IA
- Camerini P
- Campagnolo R
- Campbell M
- Cao X
- Carena F
- Carena W
- Carminati F
- Carrer N
- Carvalho R
- Caselle M
- Castillo J
- Castor J
- Catanescu V
- Cendejas LV
- Cerello P
- Cerny V
- Chajecki Z
- Chambert V
- Chandratre V
- Chapeland S
- Charpy A
- Charvet JL
- Chatterjee S
- Chattopadhyay S
- Chattopadhyay S
- Chepurnov VF
- Chernenko SA
- Cherney M
- Cheshkov C
- Cheynis B
- Chiavassa E
- Chiesa AM
- Chochula P
- Choi J
- Choudhury RK
- Christakoglou P
- Christensen CH
- Christiansen P
- Chykalov O
- Cicalo C
- Cifarelli L
- Cinausero M
- Cindolo F
- Ciobanu M
- Cleymans J
- Cobanoglu O
- Coffin JP
- Coli S
- Colla A
- Combet M
- Comets MP
- Conesa Balbastre G
- Conesa del Valle Z
- Conner ES
- Contin G
- Contreras JG
- Corral GH
- Corsi F
- Cortese P
- Courtat P
- Crescio E
- Crochet P
- Csorgo T
- Cuautle E
- Cussonneau JP
- Cuveland J
- Dainese A
- Dainese A
- Daniel L
- Das D
- Das D
- Das I
- Das S
- Dash S
- Daudon F
- Davalos AM
- Davenport M
- De Caro A
- De Cataldo G
- DE FALCO ALESSANDRO
- de Groot J
- De Gruttola D
- De Haas AP
- De Marco N
- de Matos CT
- De Pasquale S
- De Remigis P
- de Vaux G
- De Venuto D
- del Pino J
- Delagrange H
- Dellacasa G
- Deloff A
- Demanov V
- Denes E
- Derkach DA
- Devaux A
- Di Bari D
- Di Bartolomeo A
- Di Liberto S
- Di Mauro A
- Dialinas M
- Dietel T
- Dima R
- Ding HT
- Dirner A
- Divia R
- Dobrowolski T
- Dodokhov VK
- DOlivo JC
- Dominguez I
- Dovbnya AN
- Drouet S
- Ducroux L
- Dupieux P
- Dutt Mazumder AK
- Edelbruck P
- Elia D
- Emschermann D
- Engster C
- Enyo H
- Erazmus B
- Espagnon B
- Estienne M
- Esumi S
- Evans D
- Evrard S
- Fabjan CW
- Fabris D
- Faivre J
- Falchieri D
- Faleschini F
- Fateev OV
- Fearick RW
- Fedunov AG
- Feng L
- Feofilov GA
- Ferretti A
- Feshchenko VA
- Finck C
- Fini RA
- Fioretto E
- Flierl D
- Flores A
- Flores EG
- FLORIS MICHELE
- Fodor Z
- Foka P
- Foka P
- Fokine S
- Force P
- Formenti F
- Fragiacomo E
- Frankenfeld U
- Fratino U
- Frolov AR
- Fuchs U
- Fujiwara K
- Futo E
- Gaardhoje JJ
- Gabrielli A
- Gagliardi M
- Gallio M
- Gandolfi E
- Ganoti P
- Ganti MS
- Garabatos C
- Gaudichet L
- Gazdzicki M
- Gemme R
- Gemmeke H
- Germain M
- Gheata A
- Gheata M
- Ghidini B
- Ghosh P
- Girard MF
- Giraudo G
- Giubellino P
- Giubellino P
- Gladysz Dziadus E
- Glasow R
- Glassel P
- Golovine V
- Golubeva MB
- Gonzalez Gutierrez C
- Gorbunov Y
- Gorlychev VG
- Gos H
- Gosset J
- Gotovac S
- Gottschlag H
- Grabski V
- Grella G
- Grigoriev VA
- Grigoryan A
- Grigoryan S
- Grion N
- Grosse Oetringhaus JF
- Grossiord JY
- Grosso R
- Gruwe M
- Guarnaccia C
- Guber FF
- Guerin F
- Guerin F
- Guernane R
- Guichard A
- Guida M
- Gulbrandtsen K
- Gulkanyan H
- Gupta A
- Gupta S
- Gupta VK
- Gustafsson HA
- Gutbrod H
- Gutfleish M
- Haiduc M
- Hamagaki H
- Hardy P
- Hartig M
- Hartung G
- Harutyunyan A
- Hasegun D
- Hatzifotiadou D
- Hayrapetyan A
- Heine N
- Heinz UW
- Helstrup H
- Herlant S
- Herrmann N
- Hetland KF
- Hfrivnacova I
- Hippolyte B
- Hippolyte B
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- Hoedelmoser H
- Hristov P
- Humanic TJ
- Ianowski V
- Idzik M
- Igolkin SN
- Ilkaev R
- Insa C
- Ippolitov M
- Irfan M
- Ivan C
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- Jacobs PM
- Janik M
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- Jedynak M
- Jirden L
- Johnson D
- Jones GT
- Jorgensen C
- Jouve F
- Jovanovic P
- Jung HT
- Jung W
- Junique A
- Jusko A
- Kadenko I
- Kadija K
- Kadychevsky VG
- Kaidalov AB
- Kakoyan V
- Kalcher S
- Kamermans R
- Kano H
- Kaplin VA
- Kapusta S
- Karadjev K
- Karavichev OV
- Karavicheva TL
- Karpechev EV
- Karpio K
- Kataria V
- Kats MM
- Kaurova L
- Keidel R
- Khanzadeev A
- Khaoustov GV
- Kharadze G
- Kharlov YV
- Khlebnikov A
- Khurelbaatar B
- Kickinger W
- Kileng B
- Kim DW
- Kim HN
- Kim JS
- Kinson JB
- Kiprich SK
- Kiselev IT
- Kisiel A
- Kiss T
- Kisselev SM
- Klein Bosing C
- Klempt W
- Kliemant M
- Klovning A
- Kluge A
- Klymova L
- Kniege S
- Kolevatov RS
- Kolleger T
- Kolojvari AA
- Kondratiev VP
- Kornas E
- Koshurnikov EK
- Kotov IV
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- Koutcheriaev I
- Kowalski M
- Kralik I
- Kramer F
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- Kravcakova A
- Krawutschke T
- Krivan F
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- Laurenti G
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- Leistam L
- Lenti V
- Letessier J
- Levai P
- Li Q
- Li X
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- Lindenstruth V
- Lioublev E
- Lioubochits VL
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- Listratenko OM
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- Loureiro PAS
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- Lutz JR
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- Lyapin V
- Mac Cormick M
- Maevskaya AI
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- Mahapatra DP
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- Malinowski H
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- Pagliarone C
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- Pastircak B
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- Pawlak TJ
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- Polichtchouk BV
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- Shabratova GS
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- Shestakov V
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- Shileev KA
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- Silvestri R
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- Snellings R
- Sokolov O
- Soloviev AS
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- Sommer W
- Sood G
- Soos C
- Sorin AS
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- Staley FM
- Starkov VE
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- Takaki JDT
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- Vasiliev A
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- Vechernin VV
- Venturi G
- Vercellin E
- Vercellin E
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- Verhoeven W
- Vernet R
- Vetlitski IA
- Victorov VA
- Vidak L
- Viesti G
- Vik T
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- Vilakazi ZZ
- Vinogradov A
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- Vinogradov LI
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- Viyogi YP
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- Volpe G
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- Wiechula J
- Wiedemann UA
- Wilk A
- Wilk G
- Williams MCS
- Windelband B
- Wroblewski A
- Yamaletkinov S
- Yang H
- Yang HY
- Yermia F
- Yin ZB
- Yuan J
- Yurevich S
- Yurevich VI
- Yushmanov I
- Zafar M
- Zagiba M
- Zagreev BV
- Zampolli C
- Zanevsky YV
- Zaporojets SA
- Zavada P
- Zavyalov N
- Zepeda A
- Zetina LMM
- Zhalov M
- Zhelezov S
- Zhitnik A
- Zhou DC
- Zhou J
- Zhou S
- Zhu GX
- Zichichi A
- Zimanyi J
- Zinchenko AI
- Zinovjev G
- Publication venue
- Publication date
- 01/01/2006
- Field of study
ALICE is a general-purpose heavy-ion experiment designed to study the physics of strongly interacting matter and the quark-gluon plasma in nucleus-nucleus collisions at the LHC. It currently involves more than 900 physicists and senior engineers, from both the nuclear and high-energy physics sectors, from over 90 institutions in about 30 countries. The ALICE detector is designed to cope with the highest particle multiplicities above those anticipated for Pb-Pb collisions (dN(ch)/dy up to 8000) and it will be operational at the start-up of the LHC. In addition to heavy systems, the ALICE Collaboration will study collisions of lower-mass ions, which are a means of varying the energy density, and protons (both pp and pA), which primarily provide reference data for the nucleus-nucleus collisions. In addition, the pp data will allow for a number of genuine pp physics studies. The detailed design of the different detector systems has been laid down in a number of Technical Design Reports issued between mid-1998 and the end of 2004. The experiment is currently under construction and will be ready for data taking with both proton and heavy-ion beams at the start-up of the LHC. Since the comprehensive information on detector and physics performance was last published in the ALICE Technical Proposal in 1996, the detector, as well as simulation, reconstruction and analysis software have undergone significant development. The Physics Performance Report (PPR) provides an updated and comprehensive summary of the performance of the various ALICE subsystems, including updates to the Technical Design Reports, as appropriate. The PPR is divided into two volumes. Volume I, published in 2004 (CERN/LHCC 2003-049, ALICE Collaboration 2004 J. Phys. G: Nucl. Part. Phys. 30 1517-1763), contains in four chapters a short theoretical overview and an extensive reference list concerning the physics topics of interest to ALICE, the experimental conditions at the LHC, a short summary and update of the subsystem designs, and a description of the offline framework and Monte Carlo event generators. The present volume, Volume II, contains the majority of the information relevant to the physics performance in proton-proton, proton-nucleus, and nucleus-nucleus collisions. Following an introductory overview, Chapter 5 describes the combined detector performance and the event reconstruction procedures, based on detailed simulations of the individual subsystems. Chapter 6 describes the analysis and physics reach for a representative sample of physics observables, from global event characteristics to hard processes
ATLAS calorimeter performance
- Author
- Abdinov OB
- Abolins M
- Abramowicz H
- Ackermann K
- Aderholz M
- Agnvall S
- Airapetian A
- Ajaltouni Z
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- Wickens FJ
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- Zverev EG
- Publication venue
- Publication date
- 01/01/1996
- Field of study
ATLAS computing technical proposal
- Author
- Abdinov OB
- Abolins M
- Abramowicz H
- Ackermann K
- Aderholz M
- Agnvall S
- Airapetian A
- Ajaltouni Z
- Akesson T
- Akimov A
- Alam MS
- Albiol F
- Aleksandrov I
- Alekseev G
- Alexander G
- Alexanian H
- Alexiev D
- Aliev FM
- Alikov B
- Allport PP
- Almehed S
- Aloisio A
- Alviggi MG
- Amako K
- Amaral P
- Amelin DV
- Ammosov VV
- Amorim A
- Anderson K
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- Anghinolfi F
- Anosov V
- Antipov YuM
- Apsimon R J
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- Ardelean J
- Arik E
- Armitage J
- Armstrong WW
- Arnault C
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- Arsenescu R
- Artamonov A
- Asai M
- Astbury A
- Astvatsaturov A
- Athar SB
- Aubert B
- Auge E
- Autiero D
- Axen D
- Ayad R
- Azhgirei L
- Azuelos G
- Bacci C
- Bachy G
- Badaud F
- Bagnaia P
- Bailey DC
- Baines J T
- Baker OK
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- Ban J
- Bannikov A
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- Barberio E
- Barberis D
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- Barrand G
- Barreiro F
- Basa S
- Bashindzhagian GL
- Basiladze SG
- Batarin V
- Batley JR
- Batrakov A
- Battistoni G
- Baturitsky MA
- Baubillier M
- Baynham D E
- Bazan A
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- Beaugiraud B
- Beck GA
- Becker C
- Becks KH
- Behrends S
- Bella G
- Bellettini G
- Bellini G
- Belorgey J
- Belot G
- Belov M
- Ben El Fassi A
- Benary O
- Benincasa G
- Benlloch J M
- Bensinger JR
- Berger EL
- Berglund S
- Bergman R
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- Bloess D
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- Bobbink GJ
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- Bogolyubsky MYu
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- Cheu E
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- Chiladze B
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- Chlachidze G
- Chmeissani M
- Chmil V
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- Christiansen J
- Chudakov EA
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- de Saintignon P
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- Dedoussis S
- Deile M
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- Delagnes E
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- Dell'Acqua A
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- Demchenko AI
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- Denes E
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- Doersing V
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- Duval PY
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- Dzahini D
- Dzhobava T
- Ebling DG
- Edmunds D
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- Eerola P
- Efthymiopoulos I
- Egede U
- Eigen G
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- Eisenberg Y
- Eisenhandler E F
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- England D
- English RL
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- Esposito B
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- Etienne F
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- Faessler MA
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- Falciano S
- Fallou A
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- Farthouat P
- Fasching D
- Fassnacht P
- Fayard L
- Fedin O
- Fedotov M
- Fedyakin NN
- Feldman GJ
- Fent J
- Fenyuk AB
- Ferbel T
- Ferencei J
- Fernandez E
- Ferrari A
- Ferrari R
- Ferrato D
- Ferrer A
- Ferrer ML
- Feshchenko A
- Filimonov V
- Filipcic A
- Filippas A
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- Finnegan PF
- Fischer P
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- Fokitis E
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- Foster JM
- Fouchez D
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- Francis D
- Franklin MEB
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- Freestone J
- Fristedt A
- Frodesen AG
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- Fukunaga C
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- Gapienko VA
- Gaponenko I
- Gara A
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- Gavrilov G
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- Gazis E
- Gazizov AZ
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- Green BJ
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- Nikolenko M
- Nikolic I
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- Pelle J
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- Perera VJO
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- Poffenberger P
- Poggioli L
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- Pokrovsky N
- Polesello G
- Pols CLA
- Polychronakos V
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- Pope BG
- Popelvine P
- Popeneciu G
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- Punjabi V
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- Riccadonna X
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- Rimoldi A
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- Rizatdinova FK
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- Romanov V
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- Whitaker JS
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- Wickens FJ
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- Wijnen TAM
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- Wingerter I
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- Wyllie KH
- Yakimenko M
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- Zaets VG
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- Zhuravlev N
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- Zimin S
- Zitoun R
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- Zobernig G
- Zolnierowski Y
- Zontar D
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- Zuniga J
- Zverev EG
- Publication venue
- Publication date
- 01/01/1996
- Field of study