84 research outputs found
Hydrologic behaviour of Tapi river catchment using morphometric analysis
The study area Tapi River catchment covers 63,922.91 Sq.Km comprising of 5 five Sub-catchments: Purna river catchment (18,473.6 sq.km) Upper Tapi catchment (10,530.3 sq. km), Middle Tapi catchment (4,997.3 sq km), Girna river catchment (10,176.9 sq.km) and lower Tapi catchment (19,282.5 sq.km.). The drainage network of 5 Sub-catchments was delineated using remote sensing data. The morphometric analysis of 5 Sub-catchments has been carried out using GIS softwares – ArcMap. The drainage network showed that the terrain exhibits dendritic to sub-dendritic drainage pattern. Stream orders ranged from sixth to seventh order. Drainage density varied between 0.39 and 0.43km/ km2and had very coarse to coarse drainage texture. The relief ratio ranged from 0.003 to 0.007. The mean bifurcation ratio varied from 4.24 to 6.10 and falls under normal basin category. The elongation ratio showed that all catchment elongated pattern. Thus, the remote sensing techniques proved to be a competent tool in morphometric analysis
Synthesis of Nm-PHB (nanomelanin-polyhydroxy butyrate) nanocomposite film and its protective effect against biofilm-forming multi drug resistant Staphylococcus aureus
Melanin is a dark brown ubiquitous photosynthetic pigment which have many varied and ever expanding applications in fabrication of radio-protective materials, food packaging, cosmetics and in medicine. In this study, melanin production in a Pseudomonas sp. which was isolated from the marine sponge Tetyrina citirna was optimized employing one-factor at a time experiments and characterized for chemical nature and stability. Following sonication nucleated nanomelanin (Nm) particles were formed and evaluated for antibacterial and antioxidant properties. Nanocomposite film was fabricated using combinations (% w/v) of polyhydroxy butyrate-nanomelanin (PHB: Nm) blended with 1% glycerol. The Nm was found to be spherical in shape with a diameter of 100-140 nm and showed strong antimicrobial activity against both Gram positive and Gram negative bacteria. The Nm-PHB nanocomposite film was homogeneous, smooth, without any cracks, and flexible. XRD and DSC data indicated that the film was crystalline in nature, and was thermostable up to 281.87 degrees C. This study represents the first report on the synthesis of Nm and fabrication of Nm-PHB nanocomposite film which show strong protective effect against multidrug resistant Staphyloccoccus aureus. Thus this Nm-PHB nanocomposite film may find utility as packaging material for food products by protecting the food products from oxidation and bacterial contamination
GeantV: Results from the prototype of concurrent vector particle transport simulation in HEP
Full detector simulation was among the largest CPU consumer in all CERN
experiment software stacks for the first two runs of the Large Hadron Collider
(LHC). In the early 2010's, the projections were that simulation demands would
scale linearly with luminosity increase, compensated only partially by an
increase of computing resources. The extension of fast simulation approaches to
more use cases, covering a larger fraction of the simulation budget, is only
part of the solution due to intrinsic precision limitations. The remainder
corresponds to speeding-up the simulation software by several factors, which is
out of reach using simple optimizations on the current code base. In this
context, the GeantV R&D project was launched, aiming to redesign the legacy
particle transport codes in order to make them benefit from fine-grained
parallelism features such as vectorization, but also from increased code and
data locality. This paper presents extensively the results and achievements of
this R&D, as well as the conclusions and lessons learnt from the beta
prototype.Comment: 34 pages, 26 figures, 24 table
Phenotypic and genetic dissection of water stress adaptations in pearl millet (Pennisetum glaucum)
Pearl millet is an important staple food for farming communities
across semi-arid tropical systems of South Asia and
Sub-Saharan Africa where production suffers uncertain precipitation.
This work is undertaken under the premise that maximizing
grain yield under water-limited conditions depends
on both maximizing water use and ensuring water availability
for the grain filling period. Here we discuss the phenotyping
methods targeting the variability in plant water use strategies
which determine the crop production success in water-limited
environments. A fine-mapping population of pearl millet,
segregating within the previously identified drought tolerance
quantitative trait locus (QTL) on chromosome 2 (LG02), was
tested across different experimental environments (pot culture,
high-throughput phenotyping platform (LeasyScan), Lysimeter,
and Field). Recombinants were then analyzed for traits
at different levels of plant organization, ranging from water-use
traits (transpiration rate, leaf area, plant organ dry weights,
etc.) to crop production and agronomic traits (grain yield, tiller
number, harvest index, etc.) The linkages between traits
across the experimental systems were analyzed, using principal
component analysis (PCA) and QTL co-localization approach.
The functional relevance of the phenotyping systems was traced
by PCA analysis. Furthermore, we found four regions within the
LG02-QTL underlying substantial co-mapping of water-use related
and agronomic traits. These regions were identified across
the experimental systems and justified linkages between water-
use traits were phenotyped at lower level of plant organization
to the agronomic traits assessed in the field. Therefore, the
phenotyping systems at ICRISAT are validated and well set to
accelerate crop breeding for drought adaptations
Quantitative trait loci (QTLs) for water use and crop production traits co-locate with major QTL for tolerance to water deficit in a fine-mapping population of pearl millet (Pennisetum glaucum L. R.Br.)
Key message
Four genetic regions associated with water use traits, measured at different levels of plant organization, and with agronomic traits were identified within a previously reported region for terminal water deficit adaptation on linkage group 2. Close linkages between these traits showed the value of phenotyping both for agronomic and secondary traits to better understand plant productive processes.
Abstract
Water saving traits are critical for water stress adaptation of pearl millet, whereas maximizing water use is key to the absence of stress. This research aimed at demonstrating the close relationship between traits measured at different levels of plant organization, some putatively involved in water stress adaptation, and those responsible for agronomic performance. A fine-mapping population of pearl millet, segregating for a previously identified quantitative trait locus (QTL) for adaptation to terminal drought stress on LG02, was phenotyped for traits at different levels of plant organization in different experimental environments (pot culture, high-throughput phenotyping platform, lysimeters, and field). The linkages among traits across the experimental systems were analysed using principal component analysis and QTL co-localization approach. Four regions within the LG02-QTL were found and revealed substantial co-mapping of water use and agronomic traits. These regions, identified across experimental systems, provided genetic evidence of the tight linkages between traits phenotyped at a lower level of plant organization and agronomic traits assessed in the field, therefore deepening our understanding of complex traits and then benefiting both geneticists and breeders. In short: (1) under no/mild stress conditions, increasing biomass and tiller production increased water use and eventually yield; (2) under severe stress conditions, water savings at vegetative stage, from lower plant vigour and fewer tillers in that population, led to more water available during grain filling, expression of stay-green phenotypes, and higher yield
Design and rationale for REVERXaL: A real-world study of patients with factor Xa inhibitor?associated major bleeds
Background
The prevalence of anticoagulation treatment is increasing as an aging global population faces a high burden of cardiovascular comorbidities. Direct oral anticoagulants, including factor Xa inhibitors (FXai), are replacing vitamin K antagonists as the most commonly prescribed treatment for reducing risk of thrombotic events. While the risk of FXai-associated spontaneous bleeds is established, less is understood about their management and the effect of treatment on clinical and patient-reported outcomes. The primary objectives of the REVERXaL study are to describe patient characteristics, health care interventions during the acute-care phase, in-hospital outcomes, and associations between timing of reversal/replacement agent administration and in-hospital outcomes. Secondary/exploratory objectives focus on clinical assessments and patient-reported outcome measures (PROMs) at 30 and 90 days.
Methods
REVERXaL is a multinational, observational study of hospitalized patients with FXai-associated major bleeds in Germany, Japan, the United Kingdom, and the United States. The study includes 2 cohorts of approximately 2000 patients each. Cohort A is a historic cohort for whom medical chart data will be collected from hospitalization to discharge for patients admitted for major bleeds during FXai use within 2 years prior to enrollment of Cohort B. Cohort B will prospectively enroll patients administered any reversal/replacement agent during hospitalization to manage FXai-associated major bleeds and will include the collection of clinical outcomes and PROMs data over 3 months.
Conclusions
REVERXaL will generate insights on patient characteristics, treatment approaches, and associated outcomes in patients hospitalized with FXai-associated major bleeds. These data may inform clinical practice and streamline treatment pathways in this population
Microbiome interconnectedness throughout environments with major consequences for healthy people and a healthy planet
Microbiomes have highly important roles for ecosystem functioning and carry
out key functions that support planetary health, including nutrient cycling, climate regulation,
and water filtration. Microbiomes are also intimately associated with complex multicellular
organisms such as humans, other animals, plants, and insects and perform crucial roles
for the health of their hosts. Although we are starting to understand that microbiomes in
different systems are interconnected, there is still a poor understanding of microbiome
transfer and connectivity. In this review we show how microbiomes are connected within
and transferred between different habitats and discuss the functional consequences of
these connections. Microbiome transfer occurs between and within abiotic (e.g., air, soil,
and water) and biotic environments, and can either be mediated through different vectors
(e.g., insects or food) or direct interactions. Such transfer processes may also include the
transmission of pathogens or antibiotic resistance genes. However, here, we highlight the
fact that microbiome transmission can have positive effects on planetary and human
health, where transmitted microorganisms potentially providing novel functions may be important
for the adaptation of ecosystems.The European Union’s H2020 Research and Innovation Program and a grant of the Spanish Ministry of Science and Innovation.https://journals.asm.org/journal/mmbram2024Plant Production and Soil ScienceSDG-15:Life on lan
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