Visualisation of ectomycorrhizal rhizomorph structure using laser scanning confocal microscopy

A method for the observation of the three-dimensional structure of intact ectomycorrhizal rhizomorphs is described. The method is based on a combination of clearing the material with KOH followed by staining with congo red and subsequent imaging under a laser scanning confocal microscope (LSCM). The images obtained are of a much higher three-dimensional resolution than those obtained previously by use of conventional light microscopical techniques. The structure of highly differentiated and undifferentiated rhizomorphs is described. Applications of the method are briefly discussed

Horizontal gene transfer-mediated bacterial strain variation affects host fitness in Drosophila

How microbes affect host fitness and environmental adaptation has become a fundamental research question in evolutionary biology. To better understand the role of microbial genomic variation for host fitness, we tested for associations of bacterial genomic variation and Drosophila melanogaster offspring number in a microbial Genome Wide Association Study (GWAS)

Analysing powers for the reaction n⃗p→ppπ−\vec{\rm n} {\rm p} \to {\rm p} {\rm p} \pi^{-} and for np elastic scattering from 270 to 570 MeV

The analysing power of the reaction ${\rm n}{\rm p} \to {\rm p}{\rm p} \pi^{-}$ for neutron energies between threshold and 570 MeV has been determined using a transversely polarised neutron beam at PSI. The reaction has been studied in a kinematically complete measurement using a time-of-flight spectrometer with large acceptance. Analysing powers have been determined as a function of the c.m. pion angle in different regions of the proton-proton invariant mass. They are compared to other data from the reactions ${\rm n}{\rm p} \to {\rm p}{\rm p} \pi^{-}$ and ${{\rm p}{\rm p} \to {\rm p}{\rm p} \pi^{0}}$. The np elastic scattering analysing power was determined as a by-product of the measurements.Comment: 12 pages, 6 figures, subitted to EPJ-

The reaction np→ppπ−{n} {p} \to {p} {p} \pi^{-} from threshold up to 570 MeV

The reaction ${n} {p} \to {p} {p} \pi^{-}$ has been studied in a kinematically complete measurement with a large acceptance time-of-flight spectrometer for incident neutron energies between threshold and 570 MeV. The proton-proton invariant mass distributions show a strong enhancement due to the pp($^{1}{S}_{0}$) final state interaction. A large anisotropy was found in the pion angular distributions in contrast to the reaction ${p}{p} \to {p}{p} \pi^{0}$. At small energies, a large forward/backward asymmetry has been observed. From the measured integrated cross section $\sigma({n}{p} \to {\rm p}{p} \pi^{-})$, the isoscalar cross section $\sigma_{01}$ has been extracted. Its energy dependence indicates that mainly partial waves with Sp final states contribute. Note: Due to a coding error, the differential cross sections ${d \sigma}/{d M_{pp}}$ as shown in Fig. 9 are too small by a factor of two, and inn Table 3 the differential cross sections ${d \sigma}/{d \Omega_{\pi}^{*}}$ are too large by a factor of $10/2\pi$. The integrated cross sections and all conclusions remain unchanged. A corresponding erratum has been submitted and accepted by European Physics Journal.Comment: 18 pages, 16 figure

Critical connectedness of thin arithmetical discrete planes

An arithmetical discrete plane is said to have critical connecting thickness if its thickness is equal to the infimum of the set of values that preserve its $2$-connectedness. This infimum thickness can be computed thanks to the fully subtractive algorithm. This multidimensional continued fraction algorithm consists, in its linear form, in subtracting the smallest entry to the other ones. We provide a characterization of the discrete planes with critical thickness that have zero intercept and that are $2$-connected. Our tools rely on the notion of dual substitution which is a geometric version of the usual notion of substitution acting on words. We associate with the fully subtractive algorithm a set of substitutions whose incidence matrix is provided by the matrices of the algorithm, and prove that their geometric counterparts generate arithmetic discrete planes.Comment: 18 pages, v2 includes several corrections and is a long version of the DGCI extended abstrac

Serological diagnosis of echinococcosis: the diagnostic potential of native antigens

Purpose: Human alveolar (AE) and cystic echinococcosis (CE) caused by the metacestode stages of Echinococcus multilocularis and E. granulosus, respectively, lack pathognomonic clinical signs. Diagnosis therefore relies on the results of imaging and serological studies. The primary goal of this study was to evaluate the efficacy of several easy-to-produce crude or partially purified E. granulosus and E. multilocularis metacestode-derived antigens as tools for the serological diagnosis and differential diagnosis of patients suspicious for AE or CE. Methods: The sera of 51 treatment-naïve AE and 32 CE patients, 98 Swiss blood donors and 38 patients who were initially suspicious for echinococcosis but suffering from various other liver diseases (e.g., liver neoplasia, etc.) were analysed. Results: According to the results of enzyme-linked immunosorbent assays (ELISA), metacestode-derived antigens of E. granulosus had sensitivities varying from 81 to 97% and >99.9% for the diagnosis of CE and AE, respectively. Antigens derived from E. multilocularis metacestodes had sensitivities ranging from 84 to 91% and >99.9% for the diagnosis of CE and AE, respectively. Specificities ranged from 92 to >99.9%. Post-test probabilities for the differential diagnosis of AE from liver neoplasias, CE from cystic liver lesions, and screening for AE in Switzerland were around 95, 86 and 2.2%, respectively. Cross-reactions with antibodies in sera of patients with other parasitic affections (fasciolosis, schistosomosis, amebosis, cysticercosis, and filarioses) did occur at variable frequencies, but could be eliminated through the use of confirmatory testing. Conclusions: Different metacestode-derived antigens of E. granulosus and E. multilocularis are valuable, widely accessible, and cost-efficient tools for the serological diagnosis of echinococcosis. However, confirmatory testing is necessary, due to the lack of species specificity and the occurrence of cross-reactions to other helminthic disease

Towards T1-limited magnetic resonance imaging using Rabi beats

Two proof-of-principle experiments towards T1-limited magnetic resonance imaging with NV centers in diamond are demonstrated. First, a large number of Rabi oscillations is measured and it is demonstrated that the hyperfine interaction due to the NV's 14N can be extracted from the beating oscillations. Second, the Rabi beats under V-type microwave excitation of the three hyperfine manifolds is studied experimentally and described theoretically.Comment: 6 pages, 8 figure

A new mechanism for electron spin echo envelope modulation

Electron spin echo envelope modulation (ESEEM) has been observed for the first time from a coupled hetero-spin pair of electron and nucleus in liquid solution. Previously, modulation effects in spin echo experiments have only been described in liquid solutions for a coupled pair of homonuclear spins in NMR or a pair of resonant electron spins in EPR. We observe low-frequency ESEEM (26 and 52 kHz) due to a new mechanism present for any electron spin with S>1/2 that is hyperfine coupled to a nuclear spin. In our case these are electron spin (S=3/2) and nuclear spin (I=1) in the endohedral fullerene N@C60. The modulation is shown to arise from second order effects in the isotropic hyperfine coupling of an electron and 14N nucleus.Comment: 15 pages, 4 figure

First-order model for durability of Hanford waste glasses as a function of composition

Two standard chemical durability tests, the static leach test MCC-1 and product consistency test PCT, were conducted on simulated borosilicate glasses that encompass the expected range of compositions to be produced in the Hanford Waste Vitrification Plant (HWVP). A first-order empirical model was fitted to the data from each test method. The results indicate that glass durability is increased by addition of Al{sub 2}O{sub 3}, moderately increased by addition of ZrO{sub 2} and SiO{sub 2}, and decreased by addition of Li{sub 2}O, Na{sub 2}O, B{sub 2}O{sub 3}, and MgO. Addition of Fe{sub 2}O{sub 3} and CaO produce an indifferent or reducing effect on durability according to the test method. This behavior and a statistically significant lack of fit are attributed to the effects of multiple chemical reactions occurring during glass-water interaction. Liquid-liquid immiscibility is suspected to be responsible for extremely low durability of some glasses

Indications for the Nonexistence of Three-Neutron Resonances near the Physical Region

The pending question of the existence of three-neutron resonances near the physical energy region is reconsidered. Finite rank neutron-neutron forces are used in Faddeev equations, which are analytically continued into the unphysical energy sheet below the positive real energy axis. The trajectories of the three-neutron S-matrix poles in the states of total angular momenta and parity J^\pi=1/2 +- and J^\pi= 3/2 +- are traced out as a function of artificial enhancement factors of the neutron-neutron forces. The final positions of the S-matrix poles removing the artificial factors are found in all cases to be far away from the positive real energy axis, which provides a strong indication for the nonexistence of nearby three-neutron resonances. The pole trajectories close to the threshold E=0 are also predicted out of auxiliary generated three-neutron bound state energies using the Pad\'e method and agree very well with the directly calculated ones.Comment: 20 pages, 7 Postscript figures, fig.1 is corrected, uses relax.st