693 research outputs found
Orbital photogalvanic effects in quantum-confined structures
We report on the circular and linear photogalvanic effects caused by
free-carrier absorption of terahertz radiation in electron channels on
(001)-oriented and miscut silicon surfaces. The photocurrent behavior upon
variation of the radiation polarization state, wavelength, gate voltage and
temperature is studied. We present the microscopical and phenomenological
theory of the photogalvanic effects, which describes well the experimental
results. In particular, it is demonstrated that the circular (photon-helicity
sensitive) photocurrent in silicon-based structures is of pure orbital nature
originating from the quantum interference of different pathways contributing to
the absorption of monochromatic radiation.Comment: 8 pages, 5 figures, two culumne
Targeted LC-MS/MS-based metabolomics and lipidomics on limited hematopoietic stem cell numbers
Metabolism is important for the regulation of hematopoietic stem cells (HSCs) and drives cellular fate. Due to the scarcity of HSCs, it has been technically challenging to perform metabolome analyses gaining insight into HSC metabolic regulatory networks. Here, we present two targeted liquid chromatographyâmass spectrometry approaches that enable the detection of metabolites after fluorescence-activated cell sorting when sample amounts are limited. One protocol covers signaling lipids and retinoids, while the second detects tricarboxylic acid cycle metabolites and amino acids. For complete details on the use and execution of this protocol, please refer to Schönberger et al. (2022)
Learning and Matching Multi-View Descriptors for Registration of Point Clouds
Critical to the registration of point clouds is the establishment of a set of
accurate correspondences between points in 3D space. The correspondence problem
is generally addressed by the design of discriminative 3D local descriptors on
the one hand, and the development of robust matching strategies on the other
hand. In this work, we first propose a multi-view local descriptor, which is
learned from the images of multiple views, for the description of 3D keypoints.
Then, we develop a robust matching approach, aiming at rejecting outlier
matches based on the efficient inference via belief propagation on the defined
graphical model. We have demonstrated the boost of our approaches to
registration on the public scanning and multi-view stereo datasets. The
superior performance has been verified by the intensive comparisons against a
variety of descriptors and matching methods
Forecasting in the light of Big Data
Predicting the future state of a system has always been a natural motivation
for science and practical applications. Such a topic, beyond its obvious
technical and societal relevance, is also interesting from a conceptual point
of view. This owes to the fact that forecasting lends itself to two equally
radical, yet opposite methodologies. A reductionist one, based on the first
principles, and the naive inductivist one, based only on data. This latter view
has recently gained some attention in response to the availability of
unprecedented amounts of data and increasingly sophisticated algorithmic
analytic techniques. The purpose of this note is to assess critically the role
of big data in reshaping the key aspects of forecasting and in particular the
claim that bigger data leads to better predictions. Drawing on the
representative example of weather forecasts we argue that this is not generally
the case. We conclude by suggesting that a clever and context-dependent
compromise between modelling and quantitative analysis stands out as the best
forecasting strategy, as anticipated nearly a century ago by Richardson and von
Neumann
Modeling the impact of amino acid substitution in a monoclonal antibody on cation exchange chromatography
A vital part of biopharmaceutical research is decision making around which lead candidate should be progressed in early-phase development. When multiple antibody candidates show similar biological activity, developability aspects are taken into account to ease the challenges of manufacturing the potential drug candidate. While current strategies for developability assessment mainly focus on drug product stability, only limited information is available on how antibody candidates with minimal differences in their primary structure behave during downstream processing. With increasing time-to-market pressure and an abundance of monoclonal antibodies (mAbs) in development pipelines, developability assessments should also consider the ability of mAbs to integrate into the downstream platform. This study investigates the influence of amino acid substitutions in the complementarity-determining region (CDR) of a full-length IgG1 mAb on the elution behavior in preparative cation exchange chromatography. Single amino acid substitutions within the investigated mAb resulted in an additional positive charge in the light chain (L) and heavy chain (H) CDR, respectively. The mAb variants showed an increased retention volume in linear gradient elution compared with the wild-type antibody. Furthermore, the substitution of tryptophan with lysine in the H-CDR3 increased charge heterogeneity of the product. A multiscale in silico analysis, consisting of homology modeling, protein surface analysis, and mechanistic chromatography modeling increased understanding of the adsorption mechanism. The results reveal the potential effects of lead optimization during antibody drug discovery on downstream processing
Are the dead taking over Facebook? A Big Data approach to the future of death online
We project the future accumulation of profiles belonging to deceased Facebook users. Our analysis suggests that a
minimum of 1.4 billion users will pass away before 2100 if Facebook ceases to attract new users as of 2018. If the
network continues expanding at current rates, however, this number will exceed 4.9 billion. In both cases, a majority of
the profiles will belong to non-Western users. In discussing our findings, we draw on the emerging scholarship on digital
preservation and stress the challenges arising from curating the profiles of the deceased. We argue that an exclusively
commercial approach to data preservation poses important ethical and political risks that demand urgent consideration.
We call for a scalable, sustainable, and dignified curation model that incorporates the interests of multiple stakeholders
The future of social is personal: the potential of the personal data store
This chapter argues that technical architectures that facilitate the longitudinal, decentralised and individual-centric personal collection and curation of data will be an important, but partial, response to the pressing problem of the autonomy of the data subject, and the asymmetry of power between the subject and large scale service providers/data consumers. Towards framing the scope and role of such Personal Data Stores (PDSes), the legalistic notion of personal data is examined, and it is argued that a more inclusive, intuitive notion expresses more accurately what individuals require in order to preserve their autonomy in a data-driven world of large aggregators. Six challenges towards realising the PDS vision are set out: the requirement to store data for long periods; the difficulties of managing data for individuals; the need to reconsider the regulatory basis for third-party access to data; the need to comply with international data handling standards; the need to integrate privacy-enhancing technologies; and the need to future-proof data gathering against the evolution of social norms. The open experimental PDS platform INDX is introduced and described, as a means of beginning to address at least some of these six challenges
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