Predicate Classification Using Optimal Transport Loss in Scene Graph Generation

In scene graph generation (SGG), learning with cross-entropy loss yields biased predictions owing to the severe imbalance in the distribution of the relationship labels in the dataset. Thus, this study proposes a method to generate scene graphs using optimal transport as a measure for comparing two probability distributions. We apply learning with the optimal transport loss, which reflects the similarity between the labels in terms of transportation cost, for predicate classification in SGG. In the proposed approach, the transportation cost of the optimal transport is defined using the similarity of words obtained from the pre-trained model. The experimental evaluation of the effectiveness demonstrates that the proposed method outperforms existing methods in terms of mean Recall@50 and 100. Furthermore, it improves the recall of the relationship labels scarcely available in the dataset

Assessment of Sunitinib-Induced Toxicities and Clinical Outcomes Based on Therapeutic Drug Monitoring of Sunitinib for Patients With Renal Cell Carcinoma.

Background:Sunitinib has been approved for the treatment of metastatic renal cell carcinoma (RCC). Sunitinib pharmacokinetics shows a large interpatient variability.Patients and methods:A retrospective, observational clinical study of 21 patients with RCC was performed. Sunitinib was administered for 4 weeks of a 6-week cycle for the first cycle. We evaluated the association of sunitinib-induced toxicities and clinical outcomes with the trough total sunitinib concentration in a steady state during the first cycle.Results:The median total sunitinib concentration was 91.8 ng/mL (range, 49.8-205 ng/mL). There was an association between total sunitinib concentration and the severity of thrombocytopenia, anorexia, and fatigue. Patients with ≥ 100 ng/mL total sunitinib (n = 8), compared with patients with < 100 ng/mL (n = 13), had a greater incidence of Grade ≥ 3 toxicities (6 patients [75.0%] vs. 3 patients [23.1%]). Patients with < 100 ng/mL total sunitinib had significantly longer time to treatment failure (TTF) and progression-free survival (PFS) time than patients with ≥ 100 ng/mL (median TTF, 590 vs. 71 days; P = .04; median PFS, 748 vs. 238 days; P = .02).Conclusion:Results of this study suggest that therapeutic drug monitoring of sunitinib could be useful for avoiding severe toxicities. Dose reduction might be needed, especially when the total sunitinib concentration is ≥ 100 ng/mL, to avoid unnecessary early discontinuation of treatment.滋賀医科大学平成27年

IS-20 Atmospheric Science within a One Health Perspective

In the atmosphere, particulate matters exist as aerosols which may have essential functions for the earth system to health quality of the individuals. A field of atmospheric sciences associated with aerosols has been focusing mainly on their chemical and physical properties to characterize their role and effect for the climate system, ocean-atmosphere interaction, health-related issue, and more.It is well recognized that biological aerosols defined as “bioaerosols” to be present ubiquitously in the atmosphere, yet the scientific knowledge of their roles and functions are somewhat limited [1].Since the bioaerosols may have a significant effect on climate, health quality of human and livestock animals, and ecological system, it is of great importance to acquire further knowledge in many aspects. The bioaerosols such as bacteria, virus fungi, and their fragments are not well in-cooperated with the atmospheric science researches mainly due to the difficulty associated with detection of bioaerosols. Often the concentration of bioaerosols in the air is very low, which requires sampling of a large air mass. Furthermore, the current scientific communities still lack the multidisciplinary approaches to tackle airborne infection, allergen dispersion, the stability of the biological material and more in the atmosphere.Traditionally in both human and veterinary medical sciences, the bioaerosol investigations focused on understanding the infectivity of potential airborne infectious materials. For example, influenza, tuberculosis, mycoplasma, and other pathogenic ones to be examined. For example, the main focus points are finding strains which are more easily spread and the probability of infection to occur. Also, for the prevention of infectious diseases, understanding host susceptibility and immune response are also important focal points. However, in the real atmospheric condition, there are many substances in the air both gas and particulate phases. Thus understanding the mechanism of airborne infection requires not only the pathogen by itself, but it also needs to include some other co-existing airborne materials such as dust and air pollutants. Therefore, investigating the viability of bacteria with the effects of the particulate matters commonly found in the atmosphere as the co-existing material is important. Our research activities primarily focus on interactions between the bioaerosols and some other particulate matters such as dust and air pollutant in the atmosphere. This approach tries to evaluate the factors attributing the prolongation or reduction of the viability of bioaerosols. More specifically, understanding the critical factors to determine the viability of airborne pathogen, it may be easier to find solutions to control the airborne infection. Our work also focuses on emerging diseases such as Non-tuberculosis mycobacterium (NTM) clinical case in Japan [2].  In order to achieve global health, the one health approach can bridge the medical and environmental sciences as the multidisciplinary effort to safeguard human, animal, and environmental health.  

Co-evolution and Nuclear Structure in the Dwarf Galaxy POX 52 Studied by Multi-wavelength Data From Radio to X-ray

The nearby dwarf galaxy POX 52 at $z = 0.021$ hosts an active galactic nucleus (AGN) with a black-hole (BH) mass of $M_{\rm BH} \sim 10^{5-6} M_\odot$ and an Eddington ratio of $\sim$ 0.1-1. This object provides the rare opportunity to study both AGN and host-galaxy properties in a low-mass highly accreting system. To do so, we collected its multi-wavelength data from X-ray to radio. First, we construct a spectral energy distribution, and by fitting it with AGN and host-galaxy components, we constrain AGN-disk and dust-torus components. Then, while considering the AGN-disk emission, we decompose optical HST images. As a result, it is found that a classical bulge component is probably present, and its mass ($M_{\rm bulge}$) is consistent with an expected value from a local relation. Lastly, we analyze new quasi-simultaneous X-ray (0.2-30 keV) data obtained by NuSTAR and XMM-Newton. The X-ray spectrum can be reproduced by multi-color blackbody, warm and hot coronae, and disk and torus reflection components. Based on this, the spin is estimated to be $a_{\rm spin} = 0.998_{-0.814}$, which could suggest that most of the current BH mass was achieved by prolonged mass accretion. Given the presence of the bulge, POX 52 would have undergone a galaxy merger, while the $M_{\rm BH}$-$M_{\rm bulge}$ relation and the inferred prolonged accretion could suggest that AGN feedback occurred. Regarding the AGN structure, the spectral slope of the hot corona, its relative strength to the bolometric emission, and the torus structure are found to be consistent with Eddington-ratio dependencies found for nearby AGNs.Comment: 26 pages, 10 figures, 4 tables, accepted for publication in ApJ. The data in Table 4 are available from http://www.kusastro.kyoto-u.ac.jp/~kawamuro/arxiv/SEDplusComponents_u.tx

Water-in-oil droplet-mediated method for detecting and isolating infectious bacteriophage particles via fluorescent staining

Bacteriophages are the most abundant entities on Earth. In contrast with the number of phages considered to be in existence, current phage isolation and screening methods lack throughput. Droplet microfluidic technology has been established as a platform for high-throughput screening of biological and biochemical components. In this study, we developed a proof-of-concept method for isolating phages using water-in-oil droplets (droplets) as individual chambers for phage propagation and co-cultivating T2 phage and their host cell Escherichia coli within droplets. Liquid cultivation of microbes will facilitate the use of microbes that cannot grow on or degrade agar as host cells, ultimately resulting in the acquisition of phages that infect less known bacterial cells. The compartmentalizing characteristic of droplets and the use of a fluorescent dye to stain phages simultaneously enabled the enumeration and isolation of viable phage particles. We successfully recultivated the phages after simultaneously segregating single phage particles into droplets and inoculating them with their host cells within droplets. By recovering individual droplets into 96-well plates, we were able to isolate phage clones derived from single phage particles. The success rate for phage recovery was 35.7%. This study lays the building foundations for techniques yet to be developed that will involve the isolation and rupturing of droplets and provides a robust method for phage enumeration and isolation

The Masquelet technique for septic arthritis of the small joint in the hands: Case reports

Septic arthritis in distal interphalangeal (DIP) joints sometimes occurs in association with mucous cysts or after the surgical treatment of mallet fingers. Recently, several studies have demonstrated the effectiveness of the Masquelet technique in the treatment of bone defects caused by trauma or infection. However, only few studies have reported the use of this technique for septic arthritis in small joints of the hand, and its effectiveness in treating septic arthritis in DIP joints remains unclear. We report the clinical and radiological outcomes of three patients who were treated with the Masquelet technique for septic arthritis in DIP joints. One patient had uncontrolled diabetes and another had rheumatoid arthritis treated with methotrexate and prednisolone. The first surgical stage involved thorough debridement of the infection site, including the middle and distal phalanx. We placed an external fixator from the middle to the distal phalanx and then packed the cavity of the DIP joint with antibiotic cement bead of polymethylmethacrylate (40 g) including 2 g of vancomycin and 200 mg of minocycline. At 4-6 weeks after the first surgical stage, the infection had cleared, and the second surgical stage was performed. The external fixator and cement bead were carefully removed while carefully preserving the surrounding osteo-induced membrane. The membrane was smooth and nonadherent to the cement block. In the second surgical stage, an autogenous bone graft was harvested from the iliac bone and inserted into the joint space, within the membrane. The bone graft, distal phalanx, and middle phalanx were fixed with Kirschner wires and/or a soft wire. Despite the high risk of infection, bone union was achieved in all patients without recurrence of infection. Although the Masquelet technique requires two surgeries, it can lead to favorable clinical and radiological outcomes for infected small joints of the hand.Septic arthritis in distal interphalangeal (DIP) joints sometimes occurs in association with mucous cysts or after the surgical treatment of mallet fingers. Recently, several studies have demonstrated..

Nitrosomonas europaea MazF Specifically Recognises the UGG Motif and Promotes Selective RNA Degradation

Toxin-antitoxin (TA) systems are implicated in prokaryotic stress adaptation. Previously, bioinformatics analysis predicted that such systems are abundant in some slowly growing chemolithotrophs; e.g., Nitrosomonas europaea. Nevertheless, the molecular functions of these stress-response modules remain largely unclear, limiting insight regarding their physiological roles. Herein, we show that one of the putative MazF family members, encoded at the ALW85_RS04820 locus, constitutes a functional toxin that engenders a TA pair with its cognate MazE antitoxin. The coordinate application of a specialised RNA-Seq and a fluorescence quenching technique clarified that a unique triplet, UGG, serves as the determinant for MazF cleavage. Notably, statistical analysis predicted that two transcripts, which are unique in the autotroph, comprise the prime targets of the MazF endoribonuclease: hydroxylamine dehydrogenase (hao), which is essential for ammonia oxidation, and a large subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase (rbcL), which plays an important role in carbon assimilation. Given that N. europaea obtains energy and reductants via ammonia oxidation and the carbon for its growth from carbon dioxide, the chemolithotroph might use the MazF endoribonuclease to modulate its translation profile and subsequent biochemical reactions