First description of Campylobacter lanienae from feces of organic and conventional pigs, in France

In the frame of the CORE Organic II funded European project SafeOrganic, fecal samples of 58 conventional pigs and 56 organic pigs, originated from 31 organic herds and 31 conventional herds, were collected in a slaughterhouse in order to isolate Campylobacter coli. Direct streaking from feces and incubation at 37°C of the Karmali plates allowed the isolation of another Campylobacter species: Campylobacter lanienae. Indeed, among the 381 typical Campylobacter colonies isolated, it was not possible to identify the species for 118 isolates with the Wang’s multiplex-PCR. However, 85 of these isolates were confirmed C. lanienae by Maldi-Tof and by 16S rRNA PCR. With the two species, coli and lanienae, the occurrence of Campylobacter in pig was estimated to 87.9% (51/58) for conventional pigs and 96.5% (52/56) for organic pigs. A total of 55 isolates of C. lanienae were tested for their resistance to 7 antibiotics. Only one was pansusceptible. Natural resistance of this species to Nalidixic acid was confirmed. Resistance to Tetracycline was significantly different between the two productions (p to 0.98). No link between PFGE profile and isolate origin or antibiotic resistance pattern was evidenced. This study allowed us to demonstrate for the first time in France that pigs may also carry in their feces a species rarely highlighted: C. lanienae. The lower level of antibiotic resistance and multiresistance of C. lanienae strains for organic pigs may be related to the restricted use of antibiotics in this production

Direct detection of Campylobacter from feces of organic and conventional pigs highlighted the presence of Campylobacter lanienae

In the frame of the CORE Organic II funded European project SafeOrganic, fecal samples from 31 organic pig herds and 31 conventional pig herds were sampled in a slaughterhouse. Samples were highly positive in Campylobacter coli but also in another Campylobacter species not described at that time in France. Identification by MALDI-TOF mass spectrometry and PCR 16S allowed us to confirm that 85 isolates were C. Lanienae; 56 from conventional pigs and 29 from organic pigs. Individual occurrence in Campylobacter spp. was thus re-estimated to 91.1 % (51/56) and 96.3 % (52/54) for conventional and organic pigs, respectively. A total of 55 isolates of C. Lanienae were studied for their resistance to 7 antibiotics. Only one was pansusceptible. Natural resistance to Nalidixic acid was confirmed. Resistance to Tetracycline was significantly different (p \u3c to 0,001) between the two productions: 88 % of isolates from conventional pigs were resistant against 14% of isolates from organic pigs. Moreover, isolates from conventional pigs were mostly multiresistant (73%) whereas only 5% of strains isolated in organic pigs were multiresistant. The C. lanienae isolates were typed by PFGE using KpnI and SmaI enzymes. The genetic diversity was very high, whatever the enzyme used. No link between PFGE profile and isolate origin or antibiotic resistance pattern was evidenced. This study allowed us to demonstrate for the first time in France that pigs, known to be a reservoir for C. coli may also carry in their feces a species rarely highlighted: C. lanienae. The species was present in fecal samples from conventional and organic pigs. The lower level of antibiotic resistance and multiresistance of C. Lanienae strains for organic pigs may be related to the restricted use of antibiotics in this production

Activity-dependent synaptic plasticity in the central nucleus of the amygdala

Much evidence indicates that fear conditioning involves potentiation of some thalamic inputs to the lateral amygdala (LA). In turn, the LA would excite more neurons in the central nucleus (CE), leading to the generation of fear responses via their brainstem and hypothalamic projections. However, the posterior thalamus not only projects to LA but also to the medial sector of CE (CEm), suggesting that CEm might also be a site of plasticity. To test whether CEm also exhibits activity-dependent synaptic plasticity, we performed whole-cell recordings of CEm neurons in amygdala slices and stimulated thalamic axons coursing through the internal capsule and, as a control, the basolateral (BL) nucleus. High-frequency stimulation of thalamic inputs led to a long-lasting potentiation of thalamic responses, whereas BL-evoked responses remained unchanged. This thalamic long-term potentiation (LTP) developed even when slices were prepared with a cut severing the connections between the LA and CEm but was greatly reduced when an NMDA receptor antagonist was added to the perfusate shortly before and during LTP induction. Yet, intracellular dialysis with the NMDA receptor antagonist (ϩ)-5-methyl-10,11-dihydro-5H-dibenzo[a,d]cyclohepten-5,10-imine maleate did not prevent induction of the thalamic LTP, suggesting that presynaptic NMDA receptors are required for its induction. Consistent with this, the thalamic LTP also developed when the cells were dialyzed with a calcium chelator or kept hyperpolarized during induction. Finally, this thalamic LTP was associated with reduced amounts of paired-pulse facilitation, suggesting that it is expressed presynaptically. These results are consistent with the idea that the CEm plays an active role in fear conditioning

Постмиграционные общества: экономика, политика, культура

To understand the depth of transformations in all spheres of society generated by migration, new terminology is needed. The notion of "postmigrant societies" implies that the distinction between local and migrant population loses its relevance in certain social spheres. According to the familiar epistemological framework, societies are presented as consisting of "local population" on the one hand, and "migrant population" on the other. This understanding, however, is becoming obsolete. First, it does not reflect the fact that the phenomenon of spatial mobility is embedded in the social structure. A significant part of the so-called local population is itself included in migration processes. People who are considered to be part of the "autochthonous population" are in fact migrants themselves due to different circumstances (contract work, long-term stay in another country due to studies, involvement in joint business projects, participation in international scientific teams, availability of real estate abroad, etc.). At the same time, those people who are regarded as "migrants" by common sense can be well integrated into the social institutions of their new homeland. Second, the traditional epistemological framework does not reflect contemporary demographic trends. It is unable to capture two points: (a) population rotation within the framework of circular/pendulum migration; (b) qualitative change in the urban population of industrialized countries

Comparative Analyses And Structural Insights Of The Novel Cytochrome P450 Fusion Protein Family CYP5619 In Oomycetes

Published ArticlePhylogenetic and structural analysis of P450 proteins fused to peroxidase/dioxygenase has not been reported yet. We present phylogenetic and in silico structural analysis of the novel P450 fusion family CYP5619 from the deadliest fish pathogenic oomycete, Saprolegnia diclina. Data-mining and annotation of CYP5619 members revealed their unique presence in oomycetes. CYP5619 members have the highest number of conserved amino acids among eukaryotic P450s. The highest number of conserved amino acids (78%) occurred in the peroxidase/dioxygenase domain compared to the P450 domain (22%). In silico structural analysis using a high-quality CYP5619A1 model revealed that CYP5619A1 has characteristic P450 structural motifs including EXXR and CXG. However, the heme-binding domain (CXG) in CYP5619 members was found to be highly degenerated. The in silico substrate binding pattern revealed that CYP5619A1 have a high affinity to medium chain fatty acids. Interestingly, the controlling agent of S. diclina malachite green was predicted to have the highest binding affinity, along with linoleic acid. However, unlike fatty acids, none of the active site amino acids formed hydrogen bonds with malachite green. The study’s results will pave the way for assessing CYP5619A1’s role in S. diclina physiology, including the nature of malachite green binding

Bacterial etiology of sexually transmitted infections at a STI clinic in Ghana; use of multiplex real time PCR

Background: Most sexually transmitted infection (STI) management efforts focus on the syndromic approach to diagnose and treat patients. However, most women with STIs have been shown to be entirely asymptomatic, or if symptoms exist, are often missed when either clinical or conventional bacteriologic diagnostic tools are employed.Methods: We assessed the performance of a multiplex real time PCR assay to describe other potential pathogens that could be missed by conventional bacteriological techniques in 200 women attending a routine STI clinic in Kumasi, Ghana.Results: Although a total 78.00% of the women were asymptomatic, 77.1% of them tested positive for at least one bacterial STI pathogen. Mycoplasma genitalium was the most commonly detectable pathogen present in 67.5% of all women. Of those testing positive, 25.0% had single infections, while 38.0% and 19.5% had double and triple infections respectively. Altogether, 86.54% and 90.91% of the symptomatic and asymptomatic women respectively tested positive for at least one pathogen (p<0.05). There were no significant associations (p<0.05) between the clinical manifestations of the symptomatic women and the pathogens detected in their samples.Conclusions: Our study confirmed the importance of complementing the syndromic approach to STI management with pathogen detection and most importantly recognise that STIs in women are asymptomatic and regular empirical testing even for both symptomatic and asymptomatic patients is critical for complete clinical treatment.Funding: EOD (Ellis Owusu-Dabo Research working group, KCCR)Keywords: Etiology, Syndromic, Sexually Transmitted Infections, Multiplex real time PC

Clinical Evolution and Risk Factors of Hospitalized Patients with COVID-19, Haiti, March-June 2020

In December 2019, a coronavirus epidemic emerged in China. Within months, the epidemic was considered a public health emergency of international concern. In Haiti, the first laboratory-confirmed cases of COVID-19 were reported on March 19, 2020, in a context where there was some limitations of knowledge on the modes of transmission, the severity, the clinical characteristics and the risk factors of the disease. This study has made it possible to characterize the epidemic and investigate the associations between the risk factors, co morbidities, and clinical evolution of the disease. To develop the epidemiological and clinical profile of patients with COVID-19 in Haiti, data were collected from the clinical records of patients hospitalized for COVID-19 from March 16 to June 16, 2020, in 22 healthcare facilities. Univariate, bivariate, and logistic regression model analyses were performed to describe and explore the risk factors, comorbidities, and treatments associated with patients’ clinical evolution. Statistical significance was determined using a 95% confidence interval or p-value of ?0.05.  Diabetes and high blood pressure were the main comorbidities that had a statistically significant association with the severe form of the disease and the occurrence of death. The likelihood of dying increased with age, and patients in the severe form were almost four times more likely to die. The administration of ceftriaxone to patients was significantly related to recovery from the disease. Diabetes, high blood pressure, and age were the major risk factors for the severity and mortality of people infected with COVID19. Ceftriaxone administration was protective against recovery