24 research outputs found
Reproductive history of cane rat: a review of the reproduction and reproductive performance
This study evaluates in a review the reproduction and reproductive performance of cane rat. Breeding time in cane rat depends on which part of Africa the Animal is found and the weather. In the wild, cane rat lives in groups of males and females during the breeding season. The wet season of the year is the usual breeding season. Cane rat lives in groups of males and females during the breeding season. The wet season of the year is the usual breeding season. The doe when sexually ready or estrus present a perforated vaginal membrane which is sealed or open with a thin membrane. During this period, the vaginal mucus is colourless and the buck mates the doe. When the doe is not sexually ready or in estrus, it may present a closed membrane and the buck do not mate the doe. In captivity, cane rat breed all year round. Immediately after weaning the kits at four weeks, the vulva is still opened and the male is introduced to mate the female. Once there is mating, the doe’s vulva starts to close 5 – 7 days later. The mating ages in males is between 7 – 9 months and females 5 – 7 months with a mating ratio of 1 male to 4 females. Most farmers rely on the shapes and size of the head to differentiate sexes but ano-genital distance is the most popular method of sex determination. Gestation period in cane rat is 132-172 days. At birth, offspring birth weight is between 70 – 130 grammes. The litter size is 4 – 9. Cane rat is an hystricomorphic rodent. Most rodent species have flexible mating system that can vary between monogamy polygyny and promiscuity
Genetic Similarity of Yoruba Ecotype Indigenous Chickens Using Polyacrylamide Gel Electrophoresis
The study investigated genetic similarity of Yoruba Ecotype Indigenous chicken at four protein Loci: Globulin (95SkDa), Transferrin (66kDa), Albumin (36kDa) and post albumin (29kDa) using Sodium Do decyl Sulphate Polyacrylamide Gel electrophoresis (SDS PAGE) following the procedure of Bio rad resource centre. Dendogram was plotted from data generated using PAST (Palenthological statistics) soft ware for each of the protein. Similarity indices were; Transferrin (58%), Albumin (19%), Globulin (18%) and post albumin (40%). The population is genetically similar at Transferrin locus and varied widely at Albumin, Globulin and Post Albumin loci. Conclusively, the population is still under the control of natural selection. Further research should be extended to more protein loci and DNA characterisatio
Prostate specific antigen and relative prostate weight data on effect of Tetracarpidium conophorum leaf extract on testosterone-induced benign prostatic hyperplasia
Benign prostatic hyperplasia (BPH) is a common urological disorder of men, characterized by
prostatic enlargement and urethral obstruction. In this study, BPH was induced in experimental
groups by daily subcutaneous injections of testosterone propionate (TP) for 3 weeks.
Tetracarpidium conophorum was administered daily by oral gavage at a dose of 100, 200 and
400 mg/kg BW of extract for three weeks, along with the TP injections and 5mg/kg of finasteride
for comparison. On day 21, the animals were sacrificed after anesthesia. Prostate were excised,
weighed and used to determine relative prostate weight. Quantitative and qualitative
phytochemical screening was also done and it showed the presence of flavonoids (0.370mg/ml),
tannins (0.458mg/ml), phenols (0.508mg/ml) and steroids (0.257mg/ml). The prostate specific
antigen level was evaluated, the result showed the data for extract group 200mg/kg, 400mg/kg,
finasteride control group and BPH control group to be 0.186±0.0023 ng/ml, 0.153 ±0.005 ng/ml,
0.119±0.0125ng/ml and 0.332±0.004 ng/ml respectively
OPTIMISATION OF OVEN-DRYING OF BAOBAB LEAVES USING A CENTRAL COMPOSITE DESIGN
Baobab ( Adansonia digitata ) leaves represent a key nutritional
resource; although their consumption is apparently restricted to local
communities, mainly as a sticky sauce, cosmetics and a variety of
purposes. Ready-to-use powder of oven-dried baobab leaves can improve
the availability of the product on markets, and hence its utilisation
and shelf life. This study was carried out to optimise the oven-drying
temperature and duration for the best conservation of baobab leaf
powder and its sustainable availability for multipurpose uses.
Different combinations of values of temperature and drying duration
were generated, using a central composite design, in response surface
methodology framework. Findings showed that dry matter, hue, chroma and
lightness were significantly influenced by oven-drying temperature and
duration; while the least gelation concentration was significantly
influenced by the temperature. Based on leaf dry matter, hue and chroma
models, the optimal oven drying conditions for baobab leaves for good
preservation leading to human consumption and other purposes are set at
45 \ub0C for 23.5 hours.Les feuilles de baobab ( Adansonia digitata ) repr\ue9sentent une
resource nutritionnelle principal; bien que leur consommation soit
apparemment limit\ue9e aux communaut\ue9s locales, principalement
sous forme de sauce collante, de cosm\ue9tiques et \ue0 diverses
fins. La poudre de feuilles de baobab qui est s\ue9ch\ue9e dans le
four et qui est pr\ueate \ue0 \ueatre utilis\ue9e peut
am\ue9liorer la disponibilit\ue9 du produit sur les march\ue9s,
son utilisation et sa dur\ue9e de conservation. Cette \ue9tude a
\ue9t\ue9 r\ue9alis\ue9e afin d\u2019optimiser la
temp\ue9rature et la dur\ue9e de s\ue9chage dans le four pour la
meilleure conservation de la poudre de feuilles de baobab et sa
disponibilit\ue9 durable pour des usages polyvalents. Les
diff\ue9rentes combinaisons de valeurs de temp\ue9rature et de
dur\ue9e de s\ue9chage ont \ue9t\ue9 g\ue9n\ue9r\ue9es,
en utilisant une conception composite centrale, dans le cadre de la
m\ue9thodologie de surface de r\ue9ponse. Les r\ue9sultats ont
montr\ue9 que la mati\ue8re s\ue8che, la teinte, la chrominance
et la l\ue9g\ue8ret\ue9 \ue9taient significativement
influenc\ue9es par la temp\ue9rature et la dur\ue9e de
s\ue9chage dans le four four; tandis que la moindre concentration de
g\ue9lification \ue9tait significativement influenc\ue9e par la
temp\ue9rature. En se basant sur des mod\ue8les de mati\ue8re
s\ue8che, de teinte et de chrominance des feuilles, les conditions
optimales de s\ue9chage au four des feuilles de baobab pour une bonne
conservation conduisant \ue0 la consommation humaine et \ue0
d\u2019autres fins sont fix\ue9es \ue0 45 \ub0 C pendant 23,5
heures
Status and utilisation of Moringa oleifera Lam: A review
Moringa oleifera (Moringaceae) is a medium-size agroforestry tree that
originated from south Asia, but has become naturalised in many
countries globally. Moringa oleifera has gained importance due to its
multipurpose uses and good adaptability to both humid and dry climates.
Almost all parts of the plant are used. The species is considered as a
neglected and underutilised as its potential is still not well
economically known and valued. This review presents the status and
factors responsible for underutilisation of this, otherwise important
crop as a basis for formulation of viable development strategies of
knowledge on taxonomy, distribution, diverse utilisations, nutritional
value, socioeconomic importance, morphological and genetic diversity,
domestication, propagation and management of M. oleifera. Knowledge
gaps, and research and development avenues are suggested and discussed
for improved valorisation. To that purpose, articles were searched in
Google Scholar, Web of Science and BioMed Central database with
relevant keywords on M. oleifera. All the articles found, including
reviews and peer-reviewed articles were critically read and analysed
for inclusion in this review. Findings revealed that the species is one
of the most studied and used species with various uses stretching from
food and medicinal uses to water purification, biopesticide and
production of biodiesel. Findings also highlight high morphological and
genetic diversity of the species, which may become a resource for the
conservation and the selection of germplasm. However, many aspects of
the species are still waiting for further research.Moringa oleifera (Moringaceae) est un arbre de taille moyenne
originaire du sud de l\u2019Asie, mais naturalis\ue9 dans de
nombreux pays d\u2019Afrique, d\u2019Asie, d\u2019Am\ue9rique et
d\u2019Australie. M. oleifera jouit d\u2019une grande importance en
raison de ses multiples usages et de sa bonne adaptabilit\ue9 aux
climats humides et secs. Les feuilles du Moringa sont parmi les
l\ue9gumes \ue0 feuilles les plus promus pour assurer la
s\ue9curit\ue9 alimentaire et nutritionnelle des m\ue8res et des
nourrissons dans les pays en d\ue9veloppement. Presque toutes les
parties de la plante sont utilis\ue9es en m\ue9decine.
Jusqu\u2019\ue0 pr\ue9sent, l\u2019esp\ue8ce est
consid\ue9r\ue9e comme n\ue9glig\ue9e et sous-utilis\ue9e car
son potentiel n\u2019est toujours pas bien valoris\ue9. Cet article
r\ue9sume l\u2019\ue9tat actuel des connaissances sur la
taxonomie, la distribution, les utilisations diverses, la valeur
nutritionnelle, l\u2019importance socio\ue9conomique, la
diversit\ue9 morphologique et g\ue9n\ue9tique, la domestication,
la propagation et la gestion de M. oleifera. Les gaps en termes de
connaissances sur l\u2019esp\ue8ce ont \ue9t\ue9
identifi\ue9es et des axes de recherche-d\ue9veloppement ont
\ue9t\ue9 propos\ue9s et discut\ue9s pour am\ue9liorer sa
valorisation. A cet effet, des articles ont \ue9t\ue9
recherch\ue9s dans les bases de donn\ue9es Google Scholar, Web of
Science et BioMed Central avec des mots-cl\ue9s pertinents sur
l\u2019esp\ue8ce. Tous les articles trouv\ue9s, y compris les
revues et les articles \ue9valu\ue9s, ont \ue9t\ue9 lus et
analys\ue9s de mani\ue8re critique pour leur inclusion dans cet
article. Les r\ue9sultats ont r\ue9v\ue9l\ue9 que le Moringa
est l\u2019une des esp\ue8ces les plus \ue9tudi\ue9es et
utilis\ue9es au monde avec de multiples usages allant de
l\u2019alimentation et la m\ue9decine \ue0 la purification de
l\u2019eau, au biopesticide and \ue0 la production de biodiesel. Les
r\ue9sultats ont \ue9galement r\ue9v\ue9l\ue9 une grande
variabilit\ue9 morphologique et g\ue9n\ue9tique de
l\u2019esp\ue8ce, qui peut \ueatre une ressource pour la
conservation et l\u2019am\ue9lioration g\ue9n\ue9tique de
l\u2019esp\ue8ce. Cependant, beaucoup d\u2019autres aspects de
l\u2019esp\ue8ce n\ue9cessitent encore des investigations
STATUS OF VEGETATIVE PROPAGATION OF BAOBAB: A REVIEW
The African baobab ( Adansonia digitata L.) is a large tree of great
socio-economic and cultural importance in Africa, with almost all the
parts of the species used for various purposes. A major concern about
baobab fruit pulp production is the long time it takes for first
fruiting (about 15 years). Vegetative propagation offers several
advantages with regard to consumers\u2019 preferences and
precociousness of fructification. The objective of this study was to
synthesise existent knowledge related to vegetative propagation methods
of baobab and examine future prospects for improving the species
propagation. This will ultimately contribute to better integrate
baobab-based agroforestry systems into the diversification and poverty
alleviation programmes. It is clear that cutting, grafting and in vitro
multiplication are the vegetative propagation methods already tested on
baobab. The success of grafting methods ranges from 10 to 89%,
depending on the technique used. The Murashige and Skoog environment,
supplemented with or without growth regulator hormones is by far the
best condition for the in vitro reactivity of baobab explants,
regardless of their types. With regards to cuttings, the average
success rates stand around 30% when Indole-3-butyric acid (IBA) hormone
is used. Other approaches such as marcotting techniques are yet to be
tested and data on fruit production using these techniques are still
needed in order to determine the best promising method for rapid and
efficient vegetative propagation of baobab.Adansonia digitata L. est un grand arbre d\u2019importance
socio-\ue9conomique et culturelle en Afrique. Toutes les parties de
l\u2019arbre sont utilis\ue9es \ue0 diverses fins. L\u2019une des
principales pr\ue9occupations concernant la pulpe de baobab est le
temps n\ue9cessaire \ue0 la premi\ue8re fructification de
l\u2019arbre (environ 15 ans). La multiplication v\ue9g\ue9tative
pr\ue9sente plusieurs avantages en ce qui concerne les
pr\ue9f\ue9rences des consommateurs et permet la
pr\ue9cocit\ue9 de fructification. Ce travail a
synth\ue9tis\ue9 les connaissances actuelles sur les m\ue9thodes
de propagation v\ue9g\ue9tative du baobab et a discut\ue9 des
perspectives futures pour l\u2019int\ue9gration des syst\ue8mes
agroforestiers \ue0 base de baobab dans les programmes de
diversification agricole et de r\ue9duction de la pauvret\ue9. Les
r\ue9sultats ont montr\ue9 que le bouturage, le greffage et la
multiplication in vitro sont les m\ue9thodes de multiplication
v\ue9g\ue9tative d\ue9j\ue0 test\ue9es sur le baobab \ue0
ce jour. Le succ\ue8s du greffage varie de 10 \ue0 89% selon la
technique de greffage utilis\ue9e. L\u2019environnement Murashige
and Skoog compl\ue9t\ue9 avec ou sans phytohormones de croissance
est \ue0 l\u2019heure actuelle la meilleure condition pour la
r\ue9activit\ue9 in vitro des explants de baobab, quels que soient
leurs types. En ce qui concerne le bouturage, le taux de r\ue9ussite
moyen s\u2019\ue9levait \ue0 30% avec utilisation de
l\u2019hormone Acide Indole-3-butyrique (IBA). D\u2019autres
approches telles que la technique du marcottage a\ue9rien devront
\ueatre test\ue9es. Aussi, les donn\ue9es sur la production de
fruits issus de ces techniques sont n\ue9cessaires. Ces informations
permettront de d\ue9terminer la meilleure m\ue9thode \ue0
recommander pour une propagation v\ue9g\ue9tative rapide et
efficace du baobab
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance
INTRODUCTION
Investment in Africa over the past year with regard to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) sequencing has led to a massive increase in the number of sequences, which, to date, exceeds 100,000 sequences generated to track the pandemic on the continent. These sequences have profoundly affected how public health officials in Africa have navigated the COVID-19 pandemic.
RATIONALE
We demonstrate how the first 100,000 SARS-CoV-2 sequences from Africa have helped monitor the epidemic on the continent, how genomic surveillance expanded over the course of the pandemic, and how we adapted our sequencing methods to deal with an evolving virus. Finally, we also examine how viral lineages have spread across the continent in a phylogeographic framework to gain insights into the underlying temporal and spatial transmission dynamics for several variants of concern (VOCs).
RESULTS
Our results indicate that the number of countries in Africa that can sequence the virus within their own borders is growing and that this is coupled with a shorter turnaround time from the time of sampling to sequence submission. Ongoing evolution necessitated the continual updating of primer sets, and, as a result, eight primer sets were designed in tandem with viral evolution and used to ensure effective sequencing of the virus. The pandemic unfolded through multiple waves of infection that were each driven by distinct genetic lineages, with B.1-like ancestral strains associated with the first pandemic wave of infections in 2020. Successive waves on the continent were fueled by different VOCs, with Alpha and Beta cocirculating in distinct spatial patterns during the second wave and Delta and Omicron affecting the whole continent during the third and fourth waves, respectively. Phylogeographic reconstruction points toward distinct differences in viral importation and exportation patterns associated with the Alpha, Beta, Delta, and Omicron variants and subvariants, when considering both Africa versus the rest of the world and viral dissemination within the continent. Our epidemiological and phylogenetic inferences therefore underscore the heterogeneous nature of the pandemic on the continent and highlight key insights and challenges, for instance, recognizing the limitations of low testing proportions. We also highlight the early warning capacity that genomic surveillance in Africa has had for the rest of the world with the detection of new lineages and variants, the most recent being the characterization of various Omicron subvariants.
CONCLUSION
Sustained investment for diagnostics and genomic surveillance in Africa is needed as the virus continues to evolve. This is important not only to help combat SARS-CoV-2 on the continent but also because it can be used as a platform to help address the many emerging and reemerging infectious disease threats in Africa. In particular, capacity building for local sequencing within countries or within the continent should be prioritized because this is generally associated with shorter turnaround times, providing the most benefit to local public health authorities tasked with pandemic response and mitigation and allowing for the fastest reaction to localized outbreaks. These investments are crucial for pandemic preparedness and response and will serve the health of the continent well into the 21st century
Predicting the effects of non-synonymous amino acid variants on protein function in prolactin receptor of cattle and chicken using the MEGA-MD algorithm
Prolactin receptor (PRLR) is a single transmembrane protein belonging to the cytokine receptor super family through which prolactin plays a wide variety of physiological roles such as mammary gland development, milk production, reproduction and immune function in vertebrates. Many non synonymous single nucleotide polymorphisms (nsSNPs) at the PRLR locus in vertebrates are suspected to impact protein function. This study, therefore, aimed at predicting the likelihood of non synonymous (amino acid change) coding SNPs to cause functional impact on protein at the PRLR locus of cattle and chicken using the MEGA MD bioinformatics tool. In cattle, sixteen out of the first twenty non synonymous amino substitutions obtained: V5A, T9V, T12I, N18S, T19V, C20S, L26S, E32K, F34V, R49E, T52A, S61T, R66K, M72I, I79K and H87Y were beneficial, one was likely neutral, two were deleterious while one was likely deleterious. However, in chicken, L131V, E132N, A134T, V135L, I157A and T161S mutations were found harmless, three were likely neutral, eight were deleterious while three were likely deleterious. This was substantiated by the Evod (–10.70 65.32 versus 0.00-80.03), PolyPhen 2 (0.000- 0.859 versus 0.000-0.990) and SIFT (0.16-1.00 versus 0.00-1.00) values in cattle and chicken, respectively. Theoretically, the harmful amino acid substitutions would result in altered spatial structure and functions of the PRLR molecules. Further studies, however, are required to determine whether the beneficial amino acid substitutions obtained will affect the milk yield, reproductive and immune functions of Nigerian livestock species.Keywords: prolactin receptor; non-synonymous substitutions; bioinformatics tool; protein function; livestock
Genetic diversity between exotic and Nigerian indigenous Turkey at different structural loci
Poultry genetic resources in general are considered to be the most endangered and under-conserved, detailed attention is therefore needed on the existing genetic resources to reduce or prevent the increasing genetic erosion of local livestock. This study was conducted to characterize and estimate genetic diversity in Nigerian indigenous turkey and exotic turkey using blood proteins (Haemoglobin, Transferrin and Albumin) and enzyme (Carbonic Anhydrase and Esterase 1) markers. A total of 110 turkeys comprising 50 Nigerian indigenous turkeys and 60 exotic turkeys were used for the analysis. Separation of blood protein genotypes was achieved using cellulose acetate electrophoresis. The populations were characterized for their genetic variability using allele frequencies, observed heterozygosity, F-statistics (FIT, FIS, FST), test for Hardy-Weinberg and Genetic distance. Eleven variants were found at the five loci studied, two co-dominant allele A and B controlling three genotypes AA, AB, and BB were observed at Haemoglobin, Carbonic Anhydrase, Albumin and Esterase1 loci for both indigenous and exotic turkey breeds, a third allele C was observed in Transferrin locus. Allele A was the most frequency at the Hb, CA, Alb and Es1 locus in Nigerian indigenous turkey with frequencies 0.541, 0.541, 0.520, and 0.520 respectively and exotic turkey at Hb, Alb, and Es1 with frequencies 0.508, 0.617, and 0.508 respectively. Chi Square result indicated deviations from Hardy Weinberg equilibrium in the two populations. The average heterozygosity values were 0.56 and 0.477 indicating high genetic variability, heterozygote excess FIT was estimated at -0.050 while within breed excess as evaluated by FIS ranged from 0.370 to -0.336. The fixation index FST revealed that genetic diversity within the studied population was slightly differentiated. Genetic distance among the populations quantified through calculation of Nei’s Genetic distance was 0.008 while the identity was 0.992. Similarity in the estimated genetic variability parameters between the breeds indicates that the populations are closely related and there were no appreciable differences among them. This result obtained may be used as an initial guide in defining objectives for further investigations of genetic diversity and developing conservation strategies.Keywords: Electrophesis; Genetic distance; Polymorphism; Structural loc
Varimax rotated principal component factor analysis of the zoometrical traits of uda sheep
A study was conducted to determine the
interdependence among the conformation traits of
359 Uda rams using principal component factor
analysis. The body measurements were withers
height, body length, heart girth, rump height, rump
width, rump length, face length, foreleg length and
shoulder width. Age group of animals was a
significant (p<0.05) source of variation for the
studied traits. The various constituent parts of the
body developed at varying rates. From the factor
analysis, with varimax rotation of the transfor-
mation matrix, two principal components were
extracted, which accounted for 86.3% of the total
variance. The first principal component alone
explained 80.8% of the variation, and tended to
describe general size, while the second principal
component had its loadings for meat traits (rump
width, shoulder width and rump length). The two
extracted principal components could be
considered in selection programmes to obtain
animals with better conformation using fewer
measurements