Modelling DNA Response to THz Radiation

Collective response of DNA to THz electric fields is studied in a simple pair bond model. We confirm, with some caveats, a previous observation of destabilising DNA breather modes and explore the parameter-dependence of these modes. It is shown that breather modes are eliminated under reasonable physical conditions and that thermal effects are significant.Comment: 6 pages, 3 figures. version to appear in Phys. Rev.

Unquenching the Quark Model and Screened Potentials

The low-lying spectrum of the quark model is shown to be robust under the effects of `unquenching'. In contrast, the use of screened potentials is shown to be of limited use in models of hadrons. Applications to unquenching the lattice Wilson loop potential and to glueball mixing in the adiabatic hybrid spectrum are also presented.Comment: 6 pages, 3 ps figures, revtex. Version to appear in J. Phys.

Frame synchronization performance and analysis

The analysis used to generate the theoretical models showing the performance of the frame synchronizer is described for various frame lengths and marker lengths at various signal to noise ratios and bit error tolerances

The Vascular Flora of Navigation Pool 8 of the Upper Mississippi River

As a result of comprehensive field work performed during 1975 and 1976 followed by herbarium activities, a complete picture of the composition of the vascular flora of Navigation Pool 8 of the Upper Mississippi River has been obtained. The area includes a 47.5 km (23.3 mile) section of the Mississippi River between Dresbach, Minnesota and Genoa, Wisconsin. A total of 482 species in 88 families were collected. The Gramineae was the largest family with 33 genera and 63 species, while Carex (Cyperaceae) was the largest genus with 26 species. The flora comprises communities here defined as alluvial forest, willow forest, shrub, sedge meadow, Phalaris meadow, emergent, floating-leaved, submergent, spit and shore, levee, old field, and dredge spoil

Coupling hydrophobic, dispersion, and electrostatic contributions in continuum solvent models

Recent studies of the hydration of micro- and nanoscale solutes have demonstrated a strong {\it coupling} between hydrophobic, dispersion and electrostatic contributions, a fact not accounted for in current implicit solvent models. We present a theoretical formalism which accounts for coupling by minimizing the Gibbs free energy with respect to a solvent volume exclusion function. The solvent accessible surface is output of our theory. Our method is illustrated with the hydration of alkane-assembled solutes on different length scales, and captures the strong sensitivity to the particular form of the solute-solvent interactions in agreement with recent computer simulations.Comment: 11 pages, 2 figure

Black hole radiation with high frequency dispersion

We consider one model of a black hole radiation, in which the equation of motion of a matter field is modified to cut off high frequency modes. The spectrum in the model has already been analytically derived in low frequency range, which has resulted in the Planckian distributin of the Hawking temperature. On the other hand, it has been numerically shown that its spectrum deviates from the thermal one in high frequency range. In this paper, we analytically derive the form of the deviation in the high frequency range. Our result can qualitatively explain the nature of the numerically calculated spectrum. The origin of the deviation is clarified by a simple discussion.Comment: 9 pages, 10 figures, submitted to Phys.Rev.

Tests of the Gravitational Inverse-Square Law below the Dark-Energy Length Scale

We conducted three torsion-balance experiments to test the gravitational inverse-square law at separations between 9.53 mm and 55 micrometers, probing distances less than the dark-energy length scale $\lambda_{\rm d}=\sqrt[4]{\hbar c/\rho_{\rm d}}\approx 85 \mu$m. We find with 95% confidence that the inverse-square law holds ($|\alpha| \leq 1$) down to a length scale $\lambda = 56 \mu$m and that an extra dimension must have a size $R \leq 44 \mu$m.Comment: 4 pages, 6 figure

Inflation Assisted by Heterotic Axions

We explore the possibility of obtaining inflation in weakly coupled heterotic string theory, where the model dependent axions are responsible for driving inflation. This model can be considered as a certain extrapolation of $m^{2}\phi^{2}$-inflation, and is an attempt to explicitly realize the so called N-flation proposal in string theory. The instanton generated potential for the axions essentially has two parameters; a natural mass scale $M$ and the string coupling $g_{s}$. For isotropic compactifications leading to of order $\mathcal{O} (10^4)$ axions in the four dimensional spectrum we find that with $(M, g_{s})\simeq(M_{GUT}, 0.5)$ the observed temperature fluctuations in the CMB are correctly reproduced. We assume an initially random distribution for the vevs of the axions. The spectral index, $n_{s}$, is generically more red than for $m^{2}\phi^{2}$-inflation. The greater the vevs, the more red the spectral index becomes. Allowing for a wide range of vevs 55 $e$-foldings from the end of inflation, we find $0.946\lesssim n_{s} \lesssim 0.962$. The tensor-to-scalar ratio, $r$, is more sensitive to the vevs, but typically smaller than in $m^{2}\phi^{2}$-inflation. Furthermore, in the regime where the leading order theory is valid, $r$ is bounded by $r < 0.10$. The spectral index and the tensor-to-scalar ratio are correlated. For example, $n_{s}\simeq 0.951$ corresponds to $r\simeq 0.036$.Comment: 1+21 pages, 2 figures, v2: Typos corrected, v3: Typos, very minor corrections, reference added, to appear in JCA

Canonical Transformations and Path Integral Measures

This paper is a generalization of previous work on the use of classical canonical transformations to evaluate Hamiltonian path integrals for quantum mechanical systems. Relevant aspects of the Hamiltonian path integral and its measure are discussed and used to show that the quantum mechanical version of the classical transformation does not leave the measure of the path integral invariant, instead inducing an anomaly. The relation to operator techniques and ordering problems is discussed, and special attention is paid to incorporation of the initial and final states of the transition element into the boundary conditions of the problem. Classical canonical transformations are developed to render an arbitrary power potential cyclic. The resulting Hamiltonian is analyzed as a quantum system to show its relation to known quantum mechanical results. A perturbative argument is used to suppress ordering related terms in the transformed Hamiltonian in the event that the classical canonical transformation leads to a nonquadratic cyclic Hamiltonian. The associated anomalies are analyzed to yield general methods to evaluate the path integral's prefactor for such systems. The methods are applied to several systems, including linear and quadratic potentials, the velocity-dependent potential, and the time-dependent harmonic oscillator.Comment: 28 pages, LaTe

Supersymmetry, homology with twisted coefficients and n-dimensional knots

Let $n$ be any natural number. Let $K$ be any $n$-dimensional knot in $S^{n+2}$. We define a supersymmetric quantum system for $K$ with the following properties. We firstly construct a set of functional spaces (spaces of fermionic \{resp. bosonic\} states) and a set of operators (supersymmetric infinitesimal transformations) in an explicit way. Thus we obtain a set of the Witten indexes for $K$. Our Witten indexes are topological invariants for $n$-dimensional knots. Our Witten indexes are not zero in general. If $K$ is equivalent to the trivial knot, all of our Witten indexes are zero. Our Witten indexes restrict the Alexander polynomials of $n$-knots. If one of our Witten indexes for an $n$-knot $K$ is nonzero, then one of the Alexander polynomials of $K$ is nontrivial. Our Witten indexes are connected with homology with twisted coefficients. Roughly speaking, our Witten indexes have path integral representation by using a usual manner of supersymmetric theory.Comment: 10pages, no figure