621 research outputs found
Ictal asystole secondary to suspected herpes simplex encephalitis: a case report
Herpes simplex virus is a leading cause of sporadic encephalitis. While seizures are a common feature of Herpes simplex virus encephalitis, and periods of asystole have been reported in Herpes simplex virus patients, there have been no prior reports of ictal asystole secondary to such an infection
Toward High-Precision Measures of Large-Scale Structure
I review some results of estimation of the power spectrum of density
fluctuations from galaxy redshift surveys and discuss advances that may be
possible with the Sloan Digital Sky Survey. I then examine the realities of
power spectrum estimation in the presence of Galactic extinction, photometric
errors, galaxy evolution, clustering evolution, and uncertainty about the
background cosmology.Comment: 24 pages, including 11 postscript figures. Uses crckapb.sty (included
in submission). To appear in ``Ringberg Workshop on Large-Scale Structure,''
ed D. Hamilton (Kluwer, Amsterdam), p. 39
The response of perennial and temporary headwater stream invertebrate communities to hydrological extremes
The headwaters of karst rivers experience considerable hydrological variability, including spates and streambed drying. Extreme summer flooding on the River Lathkill (Derbyshire, UK) provided the opportunity to examine the invertebrate community response to unseasonal spate flows, flow recession and, at temporary sites, streambed drying. Invertebrates were sampled at sites with differing flow permanence regimes during and after the spates. Following streambed drying at temporary sites, dewatered surface sediments were investigated as a refugium for aquatic invertebrates. Experimental rehydration of these dewatered sediments was conducted to promote development of desiccation-tolerant life stages. At perennial sites, spate flows reduced invertebrate abundance and diversity, whilst at temporary sites, flow reactivation facilitated rapid colonisation of the surface channel by a limited number of invertebrate taxa. Following streambed drying, 38 taxa were recorded from the dewatered and rehydrated sediments, with Oligochaeta being the most abundant taxon and Chironomidae (Diptera) the most diverse. Experimental rehydration of dewatered sediments revealed the presence of additional taxa, including Stenophylax sp. (Trichoptera: Limnephilidae) and Nemoura sp. (Plecoptera: Nemouridae). The influence of flow permanence on invertebrate community composition was apparent despite the aseasonal high-magnitude flood events
The dependence of low redshift galaxy properties on environment
We review recent results on the dependence of various galaxy properties on
environment at low redshift. As environmental indicators, we use group mass,
group-centric radius, and the distinction between centrals and satellites;
examined galaxy properties include star formation rate, colour, AGN fraction,
age, metallicity and concentration. In general, satellite galaxies diverge more
markedly from their central counterparts if they reside in more massive haloes.
We show that these results are consistent with starvation being the main
environmental effect, if one takes into account that satellites that reside in
more massive haloes and at smaller halo-centric radii on average have been
accreted a longer time ago. Nevertheless, environmental effects are not fully
understood yet. In particular, it is puzzling that the impact of environment on
a galaxy seems independent of its stellar mass. This may indicate that the
stripping of the extended gas reservoir of satellite galaxies predominantly
occurs via tidal forces rather than ram-pressure.Comment: Invited Review given at the Workshop "Environment and the Formation
of Galaxies: 30 years later" held in Lisbon, 6-7 September 2010. 10 pages, 5
figure
Radio pulsar populations
The goal of this article is to summarize the current state of play in the
field of radio pulsar statistics. Simply put, from the observed sample of
objects from a variety of surveys with different telescopes, we wish to infer
the properties of the underlying sample and to connect these with other
astrophysical populations (for example supernova remnants or X-ray binaries).
The main problem we need to tackle is the fact that, like many areas of
science, the observed populations are often heavily biased by a variety of
selection effects. After a review of the main effects relevant to radio
pulsars, I discuss techniques to correct for them and summarize some of the
most recent results. Perhaps the main point I would like to make in this
article is that current models to describe the population are far from complete
and often suffer from strong covariances between input parameters. That said,
there are a number of very interesting conclusions that can be made concerning
the evolution of neutron stars based on current data. While the focus of this
review will be on the population of isolated Galactic pulsars, I will also
briefly comment on millisecond and binary pulsars as well as the pulsar content
of globular clusters and the Magellanic Clouds.Comment: 16 pages, 6 figures, to appear in Proceedings of ICREA Workshop on
The High-Energy Emission from Pulsars and their Systems, Sant Cugat, Spain,
2010 April 12-16 (Springer
Gravity at Work: How the Build-Up of Environments Shape Galaxy Properties
We present results on the heating of the inter-cluster medium (ICM) by
gravitational potential energy from in-falling satellites. We calculate the
available excess energy of baryons once they are stripped from their satellite
and added to the ICM of the hosting environment. this excess energy is a strong
function of environment and we find that it can exceed the contribution from
AGNs or supernovae (SN) by up to two orders of magnitude in the densest
environments/haloes. Cooling by radiative losses is in general fully
compensated by gravitational heating in massive groups and clusters with hot
gas temperature > 1 keV. The reason for the strong environment dependence is
the continued infall of substructure onto dense environments during their
formation in contrast to field-like environments. We show that gravitational
heating is able to reduce the number of too luminous galaxies in models and to
produce model luminosity functions in agreement with observations.Comment: 8 pages, 3 figures. To be published in Proceedings of JENAM 2010,
Symposium 2: "Environment and the formation of galaxies: 30 years later
Preliminary clinical assessment of the relationship between tumor alphavbeta3 integrin and perfusion in patients studied with [18F]fluciclatide kinetics and [15O]H2O PET
Gene expression and splicing alterations analyzed by high throughput RNA sequencing of chronic lymphocytic leukemia specimens.
BackgroundTo determine differentially expressed and spliced RNA transcripts in chronic lymphocytic leukemia specimens a high throughput RNA-sequencing (HTS RNA-seq) analysis was performed.MethodsTen CLL specimens and five normal peripheral blood CD19+ B cells were analyzed by HTS RNA-seq. The library preparation was performed with Illumina TrueSeq RNA kit and analyzed by Illumina HiSeq 2000 sequencing system.ResultsAn average of 48.5 million reads for B cells, and 50.6 million reads for CLL specimens were obtained with 10396 and 10448 assembled transcripts for normal B cells and primary CLL specimens respectively. With the Cuffdiff analysis, 2091 differentially expressed genes (DEG) between B cells and CLL specimens based on FPKM (fragments per kilobase of transcript per million reads and false discovery rate, FDR q < 0.05, fold change >2) were identified. Expression of selected DEGs (n = 32) with up regulated and down regulated expression in CLL from RNA-seq data were also analyzed by qRT-PCR in a test cohort of CLL specimens. Even though there was a variation in fold expression of DEG genes between RNA-seq and qRT-PCR; more than 90 % of analyzed genes were validated by qRT-PCR analysis. Analysis of RNA-seq data for splicing alterations in CLL and B cells was performed by Multivariate Analysis of Transcript Splicing (MATS analysis). Skipped exon was the most frequent splicing alteration in CLL specimens with 128 significant events (P-value <0.05, minimum inclusion level difference >0.1).ConclusionThe RNA-seq analysis of CLL specimens identifies novel DEG and alternatively spliced genes that are potential prognostic markers and therapeutic targets. High level of validation by qRT-PCR for a number of DEG genes supports the accuracy of this analysis. Global comparison of transcriptomes of B cells, IGVH non-mutated CLL (U-CLL) and mutated CLL specimens (M-CLL) with multidimensional scaling analysis was able to segregate CLL and B cell transcriptomes but the M-CLL and U-CLL transcriptomes were indistinguishable. The analysis of HTS RNA-seq data to identify alternative splicing events and other genetic abnormalities specific to CLL is an added advantage of RNA-seq that is not feasible with other genome wide analysis
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