Monoidal Hom-Hopf algebras

Hom-structures (Lie algebras, algebras, coalgebras, Hopf algebras) have been investigated in the literature recently. We study Hom-structures from the point of view of monoidal categories; in particular, we introduce a symmetric monoidal category such that Hom-algebras coincide with algebras in this monoidal category, and similar properties for coalgebras, Hopf algebras and Lie algebras.Comment: 25 pages; extended version: compared to the version that appeared in Comm. Algebra, the Section Preliminary Results and Remarks 5.1 and 6.1 have been adde

Pattern formation of microtubules and motors: inelastic interaction of polar rods

We derive a model describing spatio-temporal organization of an array of microtubules interacting via molecular motors. Starting from a stochastic model of inelastic polar rods with a generic anisotropic interaction kernel we obtain a set of equations for the local rods concentration and orientation. At large enough mean density of rods and concentration of motors, the model describes orientational instability. We demonstrate that the orientational instability leads to the formation of vortices and (for large density and/or kernel anisotropy) asters seen in recent experiments.Comment: 4 pages, 5 figures, to appear in Phys. Rev. E, Rapid Communication

A Laplace Transform Method for Molecular Mass Distribution Calculation from Rheometric Data

Polydisperse linear polymer melts can be microscopically described by the tube model and fractal reptation dynamics, while on the macroscopic side the generalized Maxwell model is capable of correctly displaying most of the rheological behavior. In this paper, a Laplace transform method is derived and different macroscopic starting points for molecular mass distribution calculation are compared to a classical light scattering evaluation. The underlying assumptions comprise the modern understanding on polymer dynamics in entangled systems but can be stated in a mathematically generalized way. The resulting method is very easy to use due to its mathematical structure and it is capable of calculating multimodal molecular mass distributions of linear polymer melts

Flow-History-Dependent Behavior in Entangled Polymer Melt Flow with Multiscale Simulation

Polymer melts represent the flow-history-dependent behavior. To clearly show this behavior, we have investigated flow behavior of an entangled polymer melt around two cylinders placed in tandem along the flow direction in a two dimensional periodic system. In this system, the polymer states around a cylinder in downstream side are different from the ones around another cylinder in upstream side because the former ones have a memory of a strain experienced when passing around the cylinder in upstream side but the latter ones do not have the memory. Therefore, the shear stress distributions around two cylinders are found to be different from each other. Moreover, we have found that the averaged flow velocity decreases accordingly with increasing the distance between two cylinders while the applied external force is constant. While this behavior is consistent with that of the Newtonian fluid, the flow-history-dependent behavior enhances the reduction of the flow resistance.Comment: 6 pages, 3 figures, Proceedings of 5th International Mini-Symposium on Liquid

A multi-wavelength view of galaxy evolution with AKARI

AKARI's all-sky survey resolves the far-infrared emission in many thousands of nearby galaxies, providing essential local benchmarks against which the evolution of high-redshift populations can be measured. This review presents some recent results in the resolved galaxy populations, covering some well-known nearby targets, as well as samples from major legacy surveys such as the Herschel Reference Survey and the JCMT Nearby Galaxies Survey. This review also discusses the prospects for higher redshifts surveys, including strong gravitational lens clusters and the AKARI NEP field.Comment: Accepted for Publications of the Korean Astronomical Society (September 30, 2012 issue, volume 27, No. 3), Proceedings of the Second AKARI conference, Legacy of AKARI: A Panoramic View of the Dusty Universe. 6 page

Conformational transformations induced by the charge-curvature interaction at finite temperature

The role of thermal fluctuations on the conformational dynamics of a single closed filament is studied. It is shown that, due to the interaction between charges and bending degrees of freedom, initially circular aggregates may undergo transformation to polygonal shape. The transition occurs both in the case of hardening and softening charge-bending interaction. In the former case the charge and curvature are smoothly distributed along the chain while in the latter spontaneous kink formation is initiated. The transition to a non-circular conformation is analogous to the phase transition of the second kind.Comment: 23 pages (Latex), 10 figures (Postscript), 2 biblio file (bib-file and bbl-file

Mean first passage times for bond formation for a Brownian particle in linear shear flow above a wall

Motivated by cell adhesion in hydrodynamic flow, here we study bond formation between a spherical Brownian particle in linear shear flow carrying receptors for ligands covering the boundary wall. We derive the appropriate Langevin equation which includes multiplicative noise due to position-dependent mobility functions resulting from the Stokes equation. We present a numerical scheme which allows to simulate it with high accuracy for all model parameters, including shear rate and three parameters describing receptor geometry (distance, size and height of the receptor patches). In the case of homogeneous coating, the mean first passage time problem can be solved exactly. In the case of position-resolved receptor-ligand binding, we identify different scaling regimes and discuss their biological relevance.Comment: final version after minor revision

Morphological Classification of Galaxies by Shapelet Decomposition in the Sloan Digital Sky Survey II: Multiwavelength Classification

We describe the application of the `shapelet' linear decomposition of galaxy images to multi-wavelength morphological classification using the $u,g,r,i,$ and $z$-band images of 1519 galaxies from the Sloan Digital Sky Survey. We utilize elliptical shapelets to remove to first-order the effect of inclination on morphology. After decomposing the galaxies we perform a principal component analysis on the shapelet coefficients to reduce the dimensionality of the spectral morphological parameter space. We give a description of each of the first ten principal component's contribution to a galaxy's spectral morphology. We find that galaxies of different broad Hubble type separate cleanly in the principal component space. We apply a mixture of Gaussians model to the 2-dimensional space spanned by the first two principal components and use the results as a basis for classification. Using the mixture model, we separate galaxies into three classes and give a description of each class's physical and morphological properties. We find that the two dominant mixture model classes correspond to early and late type galaxies, respectively. The third class has, on average, a blue, extended core surrounded by a faint red halo, and typically exhibits some asymmetry. We compare our method to a simple cut on $u-r$ color and find the shapelet method to be superior in separating galaxies. Furthermore, we find evidence that the $u-r=2.22$ decision boundary may not be optimal for separation between early and late type galaxies, and suggest that the optimal cut may be $u-r \sim 2.4$.Comment: 42 pages, 18 figs, revised version in press at AJ. Some modification to the technique, more discussion, addition/deletion/modification of several figures, color figures have been added. A high resolution version may be obtained at http://bllac.as.arizona.edu/~bkelly/shapelets/shapelets_ugriz.ps.g