Highly Entangled Ground States in Tripartite Qubit Systems

We investigate the creation of highly entangled ground states in a system of three exchange-coupled qubits arranged in a ring geometry. Suitable magnetic field configurations yielding approximate GHZ and exact W ground states are identified. The entanglement in the system is studied at finite temperature in terms of the mixed-state tangle tau. By adapting a steepest-descent optimization algorithm we demonstrate that tau can be evaluated efficiently and with high precision. We identify the parameter regime for which the equilibrium entanglement of the tripartite system reaches its maximum.Comment: 4 pages, 2 figure

Aquaplanet simulations with winter and summer hemispheres: model setup and circulation response to warming

To support further understanding of circulation changes in a warming climate, an idealised aquaplanet model setup containing summer and winter hemispheres is presented, and the results of circulation changes under warming are discussed. First, a setup is introduced that enables aquaplanet simulations with a warmer and a colder hemisphere, including realistic-looking summer and winter jet streams, storm tracks, and precipitation patterns that are fairly similar to observations, as well as a more intense and equatorward storm track in the winter compared to the summer hemisphere. The sea surface temperature (SST) distribution used here is inspired by the June–July–August zonal mean SST found in reanalysis data and is flexible to allow control of the occurrence of a single or double intertropical convergence zone (ITCZ). The setup is then used to investigate circulation changes under uniform warming, as motivated by recent research. For example, the stronger poleward shift of the storm tracks during summer compared to winter is reproduced. Furthermore, the jet waviness decreases under warming when compared on isentropes with maximum wind speed or isentropes at similar heights in pressure space. Jet stream waviness increases under warming when compared at similar-valued isentropes but primarily because the corresponding isentrope is closer to the surface in the warmer climate and waviness climatologically increases downwards in the atmosphere. A detailed analysis of the changes in wave amplitude for different wavenumbers confirms that the amplitude of large waves increases with warming, while that of short waves decreases with warming. The reduction in wave amplitude of short synoptic waves is found to dominate in the jet core region, where jet waviness also decreases and is more pronounced on the equatorward side of the jet. Long waves increase in amplitude on the poleward side of the jet and at upper stratospheric levels, which is consistent with increased jet waviness at these levels. The projected increased amplitude of planetary waves and the reduced amplitude of synoptic waves are thus clear in our aquaplanet simulations and do not require zonal asymmetries or regional warming patterns. During so-called high-amplitude wave events, there is no evidence for a preferential phase of Rossby waves of wavenumbers 5 or 7, indicating the crucial role of stationary waves forced by orography or land–sea contrast in establishing previously reported preferential phases. We confirm that feature-based block detection requires significant tuning to the warmer climate to avoid the occurrence of spurious trends. After adjustment for changes in tropopause height, the block detection used here shows no trend in the summer hemisphere and an increase in blocking in the colder hemisphere. We also confirm previous findings that the number of surface cyclones tends to decrease globally under warming and that the cyclone lifetimes become shorter, except for very long-lived cyclones.</p

Molecular dynamics in shape space and femtosecond vibrational spectroscopy of metal clusters

We introduce a method of molecular dynamics in shape space aimed at metal clusters. The ionic degrees of freedom are described via a dynamically deformable jellium with inertia parameters derived from an incompressible, irrotational flow. The shell correction method is used to calculate the electronic potential energy surface underlying the dynamics. Our finite temperature simulations of Ag_14 and its ions, following the negative to neutral to positive scheme, demonstrate the potential of pump and probe ultrashort laser pulses as a spectroscopy of cluster shape vibrations.Comment: Latex/Revtex, 4 pages with 3 Postscript figure

Electronic-structure-induced deformations of liquid metal clusters

Ab initio molecular dynamics is used to study deformations of sodium clusters at temperatures $500\cdots 1100$ K. Open-shell Na$_{14}$ cluster has two shape isomers, prolate and oblate, in the liquid state. The deformation is stabilized by opening a gap at the Fermi level. The closed-shell Na$_8$ remains magic also at the liquid state.Comment: REVTex, 11 pages, no figures, figures (2) available upon request (e-mail to hakkinen at jyfl.jyu.fi), submitted to Phys. Rev.

Millennial changes in North American wildfire and soil activity over the last glacial cycle

Climate changes in the North Atlantic region during the last glacial cycle were dominated by the slow waxing and waning of the North American ice sheet as well as by intermittent, millennial-scale Dansgaard-Oeschger climate oscillations. However, prior to the last deglaciation, the responses of North American vegetation and biomass burning to these climate variations are uncertain. Ammonium in Greenland ice cores, a product from North American soil emissions and biomass burning events, can help to fill this gap. Here we use continuous, high-resolution measurements of ammonium concentrations between 110,000 to 10,000 years ago from the Greenland NGRIP and GRIP ice cores to reconstruct North American wildfire activity and soil ammonium emissions. We find that on orbital timescales soil emissions increased under warmer climate conditions when vegetation expanded northwards into previously ice-covered areas. For millennial-scale interstadial warm periods during Marine Isotope Stage 3, the fire recurrence rate increased in parallel to the rapid warmings, whereas soil emissions rose more slowly, reflecting slow ice shrinkage and delayed ecosystem changes. We conclude that sudden warming events had little impact on soil ammonium emissions and ammonium transport to Greenland, but did result in a substantial increase in the frequency of North American wildfires

Surface reconstruction induced geometries of Si clusters

We discuss a generalization of the surface reconstruction arguments for the structure of intermediate size Si clusters, which leads to model geometries for the sizes 33, 39 (two isomers), 45 (two isomers), 49 (two isomers), 57 and 61 (two isomers). The common feature in all these models is a structure that closely resembles the most stable reconstruction of Si surfaces, surrounding a core of bulk-like tetrahedrally bonded atoms. We investigate the energetics and the electronic structure of these models through first-principles density functional theory calculations. These models may be useful in understanding experimental results on the reactivity of Si clusters and their shape as inferred from mobility measurements.Comment: 9 figures (available from the author upon request) Submitted to Phys. Rev.

Cloud computing and validation of expandable in silico livers

<p>Abstract</p> <p>Background</p> <p>In Silico Livers (ISLs) are works in progress. They are used to challenge multilevel, multi-attribute, mechanistic hypotheses about the hepatic disposition of xenobiotics coupled with hepatic responses. To enhance ISL-to-liver mappings, we added discrete time metabolism, biliary elimination, and bolus dosing features to a previously validated ISL and initiated re-validated experiments that required scaling experiments to use more simulated lobules than previously, more than could be achieved using the local cluster technology. Rather than dramatically increasing the size of our local cluster we undertook the re-validation experiments using the Amazon EC2 cloud platform. So doing required demonstrating the efficacy of scaling a simulation to use more cluster nodes and assessing the scientific equivalence of local cluster validation experiments with those executed using the cloud platform.</p> <p>Results</p> <p>The local cluster technology was duplicated in the Amazon EC2 cloud platform. Synthetic modeling protocols were followed to identify a successful parameterization. Experiment sample sizes (number of simulated lobules) on both platforms were 49, 70, 84, and 152 (cloud only). Experimental indistinguishability was demonstrated for ISL outflow profiles of diltiazem using both platforms for experiments consisting of 84 or more samples. The process was analogous to demonstration of results equivalency from two different wet-labs.</p> <p>Conclusions</p> <p>The results provide additional evidence that disposition simulations using ISLs can cover the behavior space of liver experiments in distinct experimental contexts (there is in silico-to-wet-lab phenotype similarity). The scientific value of experimenting with multiscale biomedical models has been limited to research groups with access to computer clusters. The availability of cloud technology coupled with the evidence of scientific equivalency has lowered the barrier and will greatly facilitate model sharing as well as provide straightforward tools for scaling simulations to encompass greater detail with no extra investment in hardware.</p

Thermal expansion in small metal clusters and its impact on the electric polarizability

The thermal expansion coefficients of $\mathrm{Na}_{N}$ clusters with $8 \le N \le 40$ and $\mathrm{Al}_{7}$, $\mathrm{Al}_{13}^-$ and $\mathrm{Al}_{14}^-$ are obtained from {\it ab initio} Born-Oppenheimer LDA molecular dynamics. Thermal expansion of small metal clusters is considerably larger than that in the bulk and size-dependent. We demonstrate that the average static electric dipole polarizability of Na clusters depends linearly on the mean interatomic distance and only to a minor extent on the detailed ionic configuration when the overall shape of the electron density is enforced by electronic shell effects. The polarizability is thus a sensitive indicator for thermal expansion. We show that taking this effect into account brings theoretical and experimental polarizabilities into quantitative agreement.Comment: 4 pages, 2 figures, one table. Accepted for publication in Physical Review Letters. References 10 and 23 update

Ionic structure and photoabsorption in medium sized sodium clusters

We present ground-state configurations and photoabsorption spectra of Na-7+, Na-27+ and Na-41+. Both the ionic structure and the photoabsorption spectra of medium-size sodium clusters beyond Na-20 have been calculated self-consistently with a nonspherical treatment of the valence electrons in density functional theory. We use a local pseudopotential that has been adjusted to experimental bulk properties and the atomic 3s level of sodium. Our studies have shown that both the ionic structure of the ground state and the positions of the plasmon resonances depend sensitively on the pseudopotential used in the calculation, which stresses the importance of its consistent use in both steps.Comment: 4 pages, 3 figures. Accepted for publication in PRB, tentatively July 15th, 1998 some typos corrected, brought to nicer forma