On continuum modeling of sputter erosion under normal incidence: interplay between nonlocality and nonlinearity

Under specific experimental circumstances, sputter erosion on semiconductor materials exhibits highly ordered hexagonal dot-like nanostructures. In a recent attempt to theoretically understand this pattern forming process, Facsko et al. [Phys. Rev. B 69, 153412 (2004)] suggested a nonlocal, damped Kuramoto-Sivashinsky equation as a potential candidate for an adequate continuum model of this self-organizing process. In this study we theoretically investigate this proposal by (i) formally deriving such a nonlocal equation as minimal model from balance considerations, (ii) showing that it can be exactly mapped to a local, damped Kuramoto-Sivashinsky equation, and (iii) inspecting the consequences of the resulting non-stationary erosion dynamics.Comment: 7 pages, 2 Postscript figures, accepted by Phys. Rev. B corrected typos, few minor change

How ripples turn into dots: modeling ion-beam erosion under oblique incidence

Pattern formation on semiconductor surfaces induced by low energetic ion-beam erosion under normal and oblique incidence is theoretically investigated using a continuum model in form of a stochastic, nonlocal, anisotropic Kuramoto-Sivashinsky equation. Depending on the size of the parameters this model exhibits hexagonally ordered dot, ripple, less regular and even rather smooth patterns. We investigate the transitional behavior between such states and suggest how transitions can be experimentally detected.Comment: 11 pages, 4 figures, submitted for publication, revised versio

Hierarchical fragmentation and collapse signatures in a high-mass starless region

Aims: Understanding the fragmentation and collapse properties of the dense gas during the onset of high-mass star formation. Methods: We observed the massive (~800M_sun) starless gas clump IRDC18310-4 with the Plateau de Bure Interferometer (PdBI) at sub-arcsecond resolution in the 1.07mm continuum andN2H+(3-2) line emission. Results: Zooming from a single-dish low-resolution map to previous 3mm PdBI data, and now the new 1.07mm continuum observations, the sub-structures hierarchically fragment on the increasingly smaller spatial scales. While the fragment separations may still be roughly consistent with pure thermal Jeans fragmentation, the derived core masses are almost two orders of magnitude larger than the typical Jeans mass at the given densities and temperatures. However, the data can be reconciled with models using non-homogeneous initial density structures, turbulence and/or magnetic fields. While most sub-cores remain (far-)infrared dark even at 70mum, we identify weak 70mum emission toward one core with a comparably low luminosity of ~16L_sun, re-enforcing the general youth of the region. The spectral line data always exhibit multiple spectral components toward each core with comparably small line widths for the individual components (in the 0.3 to 1.0km/s regime). Based on single-dish C18O(2-1) data we estimate a low virial-to-gas-mass ratio <=0.25. We discuss that the likely origin of these spectral properties may be the global collapse of the original gas clump that results in multiple spectral components along each line of sight. Even within this dynamic picture the individual collapsing gas cores appear to have very low levels of internal turbulence.Comment: 8 pages, 4 figures, A&A in pres

Long-term Variability of H2_2CO Masers in Star-forming Regions

We present results of a multi-epoch monitoring program on variability of 6$\,$cm formaldehyde (H$_2$CO) masers in the massive star forming region NGC$\,$7538$\,$IRS$\,$1 from 2008 to 2015 conducted with the GBT, WSRT, and VLA. We found that the similar variability behaviors of the two formaldehyde maser velocity components in NGC$\,$7538$\,$IRS$\,$1 (which was pointed out by Araya and collaborators in 2007) have continued. The possibility that the variability is caused by changes in the maser amplification path in regions with similar morphology and kinematics is discussed. We also observed 12.2$\,$GHz methanol and 22.2$\,$GHz water masers toward NGC$\,$7538$\,$IRS$\,$1. The brightest maser components of CH$_3$OH and H$_2$O species show a decrease in flux density as a function of time. The brightest H$_2$CO maser component also shows a decrease in flux density and has a similar LSR velocity to the brightest H$_2$O and 12.2$\,$GHz CH$_3$OH masers. The line parameters of radio recombination lines and the 20.17 and 20.97$\,$GHz CH$_3$OH transitions in NGC$\,$7538$\,$IRS$\,$1 are also reported. In addition, we observed five other 6$\,$cm formaldehyde maser regions. We found no evidence of significant variability of the 6$\,$cm masers in these regions with respect to previous observations, the only possible exception being the maser in G29.96$-$0.02. All six sources were also observed in the H$_2^{13}$CO isotopologue transition of the 6$\,$cm H$_2$CO line; H$_2^{13}$CO absorption was detected in five of the sources. Estimated column density ratios [H$_2^{12}$CO]/[H$_2^{13}$CO] are reported.Comment: 29 pages, 9 figure

Influence of the Dufour effect on convection in binary gas mixtures

Linear and nonlinear properties of convection in binary fluid layers heated from below are investigated, in particular for gas parameters. A Galerkin approximation for realistic boundary conditions that describes stationary and oscillatory convection in the form of straight parallel rolls is used to determine the influence of the Dufour effect on the bifurcation behaviour of convective flow intensity, vertical heat current, and concentration mixing. The Dufour--induced changes in the bifurcation topology and the existence regimes of stationary and traveling wave convection are elucidated. To check the validity of the Galerkin results we compare with finite--difference numerical simulations of the full hydrodynamical field equations. Furthermore, we report on the scaling behaviour of linear properties of the stationary instability.Comment: 14 pages and 10 figures as uuencoded Postscript file (using uufiles

Analyzing and reconstructing reticulation networks under timing constraints

Reticulation networks are now frequently used to model the history of life for various groups of organisms whose evolutionary past is likely to include reticulation events like horizontal gene transfer or hybridization. However, the reconstructed networks are rarely guaranteed to be temporal. If a reticulation network is temporal, then it satisfies the two biologically motivated timing constraints of instantaneously occurring reticulation events and successively occurring speciation events. On the other hand, if a reticulation network is not temporal, it is always possible to resolve this issue by adding a number of additional unsampled or extinct taxa. In the first half of the paper, we show that deciding whether a given number of additional taxa is sufficient to transform a non-temporal reticulation network into a temporal one is an NP-complete problem. As one is often given a set of gene trees instead of a network in the context of hybridization, this motivates the second half of the paper which provides an algorithm for reconstructing a temporal hybridization network that simultaneously explains the ancestral history of two trees or indicates that no such network exists. We highlight two practical applications of this algorithm and illustrate the second application on a grass data set

Linear Parsing Expression Grammars

PEGs were formalized by Ford in 2004, and have several pragmatic operators (such as ordered choice and unlimited lookahead) for better expressing modern programming language syntax. Since these operators are not explicitly defined in the classic formal language theory, it is significant and still challenging to argue PEGs' expressiveness in the context of formal language theory.Since PEGs are relatively new, there are several unsolved problems.One of the problems is revealing a subclass of PEGs that is equivalent to DFAs. This allows application of some techniques from the theory of regular grammar to PEGs. In this paper, we define Linear PEGs (LPEGs), a subclass of PEGs that is equivalent to DFAs. Surprisingly, LPEGs are formalized by only excluding some patterns of recursive nonterminal in PEGs, and include the full set of ordered choice, unlimited lookahead, and greedy repetition, which are characteristic of PEGs. Although the conversion judgement of parsing expressions into DFAs is undecidable in general, the formalism of LPEGs allows for a syntactical judgement of parsing expressions.Comment: Parsing expression grammars, Boolean finite automata, Packrat parsin

Amorphous thin film growth: theory compared with experiment

Experimental results on amorphous ZrAlCu thin film growth and the dynamics of the surface morphology as predicted from a minimal nonlinear stochastic deposition equation are analysed and compared. Key points of this study are (i) an estimation procedure for coefficients entering into the growth equation and (ii) a detailed analysis and interpretation of the time evolution of the correlation length and the surface roughness. The results corroborate the usefulness of the deposition equation as a tool for studying amorphous growth processes.Comment: 7 pages including 5 figure