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Innervation and Muscle Cell Infiltration of Plastic Compressed Collagen Constructs
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Evaluating Patient Preferences of Maintenance Therapy for the Treatment of Chronic Obstructive Pulmonary Disease: A Discrete Choice Experiment in the UK, USA and Germany.
Introduction: With increasing availability of different treatments for chronic obstructive pulmonary disease (COPD), we sought to understand patient preferences for COPD treatment in the UK, USA, and Germany using a discrete choice experiment (DCE). Methods: Qualitative research identified six attributes associated with COPD maintenance treatments: ease of inhaler use, exacerbation frequency, frequency of inhaler use, number of different inhalers used, side effect frequency, and out-of-pocket costs. A DCE using these attributes, with three levels each, was designed and tested through cognitive interviews and piloting. It comprised 18 choice sets, selected using a D-efficient experimental design. Demographics and disease history were collected and the final DCE survey was completed online by participants recruited from panels in the UK, USA and Germany. Responses were analyzed using mixed logit models, with results expressed as odds ratios (ORs). Results: Overall, 450 participants (150 per country) completed the DCE; most (UK and Germany, 97.3%; USA, 98.0%) were included in the final analysis. Based on relative attribute importance, avoidance of side effects was found to be most important (UK: OR 11.65; USA: OR 7.17; Germany: OR 11.45; all p<0.0001), followed by the likelihood of fewer exacerbations (UK: OR 2.22; USA: OR 1.63; Germany: OR 2.54; all p<0.0001) and increased ease of use (UK: OR 1.84; USA: OR 1.84; Germany: OR 1.60; all p<0.0001). Number of inhalers, out-of-pocket costs, and frequency of inhaler use were found to be less important. Preferences were relatively consistent across the three countries. All participants required a reduction in exacerbations to accept more frequent inhaler use or use of more inhalers. Conclusion: When selecting COPD treatment, individuals assigned the highest value to the avoidance of side effects, experiencing fewer exacerbations, and ease of inhaler use. Ensuring that patients' preferences are considered may encourage treatment compliance
Semi-supervised prediction of protein interaction sentences exploiting semantically encoded metrics
Protein-protein interaction (PPI) identification is an integral component of many biomedical research and database curation tools. Automation of this task through classification is one of the key goals of text mining (TM). However, labelled PPI corpora required to train classifiers are generally small. In order to overcome this sparsity in the training data, we propose a novel method of integrating corpora that do not contain relevance judgements. Our approach uses a semantic language model to gather word similarity from a large unlabelled corpus. This additional information is integrated into the sentence classification process using kernel transformations and has a re-weighting effect on the training features that leads to an 8% improvement in F-score over the baseline results. Furthermore, we discover that some words which are generally considered indicative of interactions are actually neutralised by this process
The Spectroscopic Age of 47 Tuc
High signal-to-noise integrated spectra of the metal-rich globular cluster 47
Tuc, spanning the H-gamma(HR) and Fe4668 line indices, have been obtained. The
combination of these indices has been suggested (Jones & Worthey 1995, ApJ,
446, L31) as the best available mechanism for cleanly separating the
age-metallicity degeneracy which hampers the dating of distant, unresolved,
elliptical galaxies. For the first time, we apply this technique to a nearby
spheroidal system, 47 Tuc, for which independent ages, based upon more
established methods, exist. Such an independent test of the technique's
suitability has not been attempted before, but is an essential one before its
application to more distant, unresolved, stellar populations can be considered
valid. Because of its weak series of Balmer lines, relative to model spectra,
our results imply a spectroscopic ``age'' for 47 Tuc well in excess of 20 Gyr,
at odds with the colour-magnitude diagram age of 14+/-1 Gyr. The derived metal
abundance, however, is consistent with the known value. Emission ``fill-in'' of
the H-gamma line as the source of the discrepancy cannot be entirely excluded
by existing data, although the observational constraints are restrictive.Comment: 17 pages, 4 figures, LaTeX, accepted for publication in The
Astronomical Journal, also available at
http://casa.colorado.edu/~bgibson/publications.htm
Communication, Liminality, and Hope: The September 11th Missing Person Posters
Immediately following the attacks on the World Trade Center on September 11, 2001, family and friends of victims missing in the towers began placing ‘‘Missing Person Posters’’ of their loved ones around New York City. In this paper, we argue that the posters represent a powerful response to a traumatic and in some ways unprecedented situation, a response that transformed the death of loved ones from a reality or future certainty into a probability made possible by the searchers’ desire, emotions, or imagination. We demonstrate how the posters, operating in the ‘‘subjunctive’’ voice, transformed the ‘‘ liminal’’ space between life and death and ‘‘haunted’’ onlookers, so that survivors and spectators alike could ponder the possibilities of a world that would ‘‘hopefully’’ turn out for the best. We also consider the implications of the posters for those who were unable to acknowledge the loss of their loved ones
Association between a functional interleukin 6 receptor genetic variant and risk of depression and psychosis in a population-based birth cohort
OBJECTIVE: Interleukin 6 (IL-6) levels are commonly elevated in patients with depression and psychosis and in people who are at risk of developing these disorders. A common, functional variant in the IL6R gene (IL6R Asp358Ala; rs2228145 A > C) is known to dampen down inflammation by impairing IL6R signaling. We have examined the association of Asp358Ala with diagnosis of depression and psychosis, serum IL-6, CRP levels, and a number of risk factors commonly linked with inflammation, depression or psychosis. We predicted that if IL-6 were related to depression/psychosis risk causally, rather than due to confounding, Asp358Ala would be associated with risk of these disorders, serum IL-6, CRP levels, but not with any of the confounders. METHOD: We used data from the population-based ALSPAC birth cohort. Serum IL-6 and CRP levels were measured at age 9 years. Psychotic disorder, ICD-10 diagnosis of severe depressive episode, and total depression score were assessed at age 18 years. IL6R Asp358Ala was genotyped using the Illumina HumanHap550 quad genome-wide SNP genotyping platform. Risk factors assessed include sex, body mass index, social class, ethnicity, maternal education, birth weight, gestational age, maternal post-natal depression, childhood psychological and behavioral problems, and total IQ score. RESULTS: Asp358Ala was associated with decreased risk of severe depression and/or psychosis; adjusted odds ratio for those with CC, compared with AA, genotype was 0.38 (95% CI, 0.15-0.94). The variant was associated with increased serum IL-6 levels (P = 5.5 × 10-22) but decreased serum CRP levels (P = 3.5 × 10-5), consistent with an anti-inflammatory effect downstream of IL-6. Asp358Ala was not associated with total depression score. Asp358Ala was not associated with any of the other risk factors commonly linked with inflammation, depression or psychosis (all P > 0.20). CONCLUSIONS: The findings provide further evidence that the IL-6/IL6R pathways are involved in pathogenesis of severe depression and psychosis, and may be novel therapeutic targets. Previously reported associations between IL-6, depression and psychosis are unlikely to be fully explained by confounding. Based on a small number of cases, findings from the current study need replication in other samples
Accuracy of methods for detecting an irregular pulse and suspected atrial fibrillation: a systematic review and meta-analysis
Background: Pulse palpation has been recommended as the first step of screening to detect atrial fibrillation. We aimed to determine and compare the accuracy of different methods for detecting pulse irregularities caused by atrial fibrillation.
Methods: We systematically searched MEDLINE, EMBASE, CINAHL and LILACS until 16 March 2015. Two reviewers identified eligible studies, extracted data and appraised quality using the QUADAS-2 instrument. Meta-analysis, using the bivariate hierarchical random effects method, determined average operating points for sensitivities, specificities, positive and negative likelihood ratios (PLR, NLR); we constructed summary receiver operating characteristic plots.
Results: Twenty-one studies investigated 39 interventions (n = 15,129 pulse assessments) for detecting atrial fibrillation. Compared to 12-lead electrocardiography (ECG) diagnosed atrial fibrillation, blood pressure monitors (BPMs; seven interventions) and non-12-lead ECGs (20 interventions) had the greatest accuracy for detecting pulse irregularities attributable to atrial fibrillation (BPM: sensitivity 0.98 (95% confidence interval (CI) 0.92–1.00), specificity 0.92 (95% CI 0.88–0.95), PLR 12.1 (95% CI 8.2–17.8) and NLR 0.02 (95% CI 0.00–0.09); non-12-lead ECG: sensitivity 0.91 (95% CI 0.86–0.94), specificity 0.95 (95% CI 0.92–0.97), PLR 20.1 (95% CI 12–33.7), NLR 0.09 (95% CI 0.06–0.14)). There were similar findings for smartphone applications (six interventions) although these studies were small in size. The sensitivity and specificity of pulse palpation (six interventions) were 0.92 (95% CI 0.85–0.96) and 0.82 (95% CI 0.76–0.88), respectively (PLR 5.2 (95% CI 3.8–7.2), NLR 0.1 (95% CI 0.05–0.18)).
Conclusions: BPMs and non-12-lead ECG were most accurate for detecting pulse irregularities caused by atrial fibrillation; other technologies may therefore be pragmatic alternatives to pulse palpation for the first step of atrial fibrillation screening
TK: The Twitter Top-K Keywords Benchmark
Information retrieval from textual data focuses on the construction of
vocabularies that contain weighted term tuples. Such vocabularies can then be
exploited by various text analysis algorithms to extract new knowledge, e.g.,
top-k keywords, top-k documents, etc. Top-k keywords are casually used for
various purposes, are often computed on-the-fly, and thus must be efficiently
computed. To compare competing weighting schemes and database implementations,
benchmarking is customary. To the best of our knowledge, no benchmark currently
addresses these problems. Hence, in this paper, we present a top-k keywords
benchmark, TK, which features a real tweet dataset and queries with
various complexities and selectivities. TK helps evaluate weighting
schemes and database implementations in terms of computing performance. To
illustrate TK's relevance and genericity, we successfully performed
tests on the TF-IDF and Okapi BM25 weighting schemes, on one hand, and on
different relational (Oracle, PostgreSQL) and document-oriented (MongoDB)
database implementations, on the other hand
Neisseria meningitidis serogroup C sepsis and septic arthritis in an HIV-positive man
A patient with well-controlled HIV-1 infection presented with fever and rigors, a widespread maculopapular rash, and severe generalised arthralgia. Sepsis of unknown aetiology was diagnosed, and treatment with broad-spectrum antimicrobials commenced. Following initial clinical improvement, a right knee septic arthritis developed. Microscopy and culture of the joint aspirate were negative for organisms but 16S rDNA PCR identified Neisseria meningitidis DNA, subsequently verified as capsular genogroup C, thus confirming a diagnosis of disseminated meningococcal sepsis with secondary septic arthritis
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