A good leaf order on simplicial trees

Using the existence of a good leaf in every simplicial tree, we order the facets of a simplicial tree in order to find combinatorial information about the Betti numbers of its facet ideal. Applications include an Eliahou-Kervaire splitting of the ideal, as well as a refinement of a recursive formula of H\`a and Van Tuyl for computing the graded Betti numbers of simplicial trees.Comment: 17 pages, to appear; Connections Between Algebra and Geometry, Birkhauser volume (2013

The Consumption, Physical Activity, and Nutrition Status to Blood Cholesterol of Participants in Posbindu Anggrek Rosalina, Cibodas Baru, Tangerang

One of the changes with increasing age is the increase in total blood cholesterol levels. The purpose of this research is to know the relationship of  the consumption level of (energy, fat, and cholesterol), physical activity, and nutritional status with total blood cholesterol of the participants of Posbindu Anggrek Rosalina 45-59 years old  in Kelurahan Cibodas Baru Tangerang City 2015.This research use cross sectional design with population of all participants Posbindu Anggrek Rosalina age 45-59 years Kelurahan Cibodas Baru Tangerang City Year 2015. Sampling using purposive sampling technique and obtained 41 respondents. The results showed that average energy consumption was 1806.38 Calories / day, fat consumption level 71.84 gr / day, cholesterol consumption 238.87 mg / day, physical activity 1.49, nutritional status (BMI)  25.70 (overweight), and total blood cholesterol 212.66 mg / dl.Pearson correlation test showed that there was a significant correlation between energy consumption level (p = 0.045 <α = 0.05), fat consumption level (p = 0.039 <α = 0.05), and cholesterol consumption level (p = 0.016 <α = 0.05) with total blood cholesterol levels. There was no significant relationship between physical activity (p = 0.273> α = 0.05), whereas there was no correlation between nutritional status (p = 0.597> α = 0.05) with total blood cholesterol level

Regularity of squarefree monomial ideals

We survey a number of recent studies of the Castelnuovo-Mumford regularity of squarefree monomial ideals. Our focus is on bounds and exact values for the regularity in terms of combinatorial data from associated simplicial complexes and/or hypergraphs.Comment: 23 pages; survey paper; minor changes in V.

Dean flow-coupled inertial focusing in curved channels

Passive particle focusing based on inertial microfluidics was recently introduced as a high-throughput alternative to active focusing methods that require an external force field to manipulate particles. In inertial microfluidics, dominant inertial forces cause particles to move across streamlines and occupy equilibrium positions along the faces of walls in flows through straight micro channels. In this study, we systematically analyzed the addition of secondary Dean forces by introducing curvature and show how randomly distributed particles entering a simple u-shaped curved channel are focused to a fixed lateral position exiting the curvature. We found the lateral particle focusing position to be fixed and largely independent of radius of curvature and whether particles entering the curvature are pre-focused (at equilibrium) or randomly distributed. Unlike focusing in straight channels, where focusing typically is limited to channel cross-sections in the range of particle size to create single focusing point, we report here particle focusing in a large cross-section area (channel aspect ratio 1: 10). Furthermore, we describe a simple u-shaped curved channel, with single inlet and four outlets, for filtration applications. We demonstrate continuous focusing and filtration of 10 mu m particles (with > 90% filtration efficiency) from a suspension mixture at throughputs several orders of magnitude higher than flow through straight channels (volume flow rate of 4.25ml/min). Finally, as an example of high throughput cell processing application, white blood cells were continuously processed with a filtration efficiency of 78% with maintained high viability. We expect the study will aid in the fundamental understanding of flow through curved channels and open the door for the development of a whole set of bio-analytical applications

Cancer Esophagus Karachi 1995-2002:Epidemiology, Risk Factors and Trends

Objective: To study the trends of cancer esophagus in Karachi South during 1995-2002 and identify risk factors. Methods: Incident esophageal cancer cases recorded at the Karachi Cancer Registry for Karachi South, during 1st January 1995 to 31st December 2003 were reviewed. For maximum completion of data, incident cases registered from 1st January 1995 to 31st December 2002 were included for final analyses. Results: The Age Standardized Incidence Rates (ASIRs) of cancer esophagus in Karachi South for males were 6.5/100,000 (1995-1997) and 6.4/100,000 (1998-2002). In females the observed rates were 7.0/100,000 (1995-1997) and 8.6/100,000 (1998-2002). Conclusion: In the moderately high incidence, cancer esophagus zone of Karachi, the ASIRs in males remained stable during the last decade, but in females, an upward trend was observed suggesting a progressively higher exposure to risk factors in the latter. The potential risk factors in Karachi are use of all forms of tobacco, areca nut, infrequent consumption of raw fruits and vegetables and diet deficiencies. There is a necessity to actively control the proven risk factors and address the existence of other risk factors. The primary recommended strategy for the control of cancer esophagus would therefore be legislation against tobacco and areca nut in Pakistan and public health education. The risk factors of cancer esophagus identified in this article need to be further confirmed

Cancer Patterns in Karachi Division (1998-1999)

Objective: A minimal cancer incidence data for Karachi, the largest city of Pakistan, is being presented here, for the years 1998-1999. The city has a population of 9,802,134; males 5,261,712 (52.6%) and females 4,540,422 (47.4%); census 19981. Methodology: A predominantly mixed (passive and active) registration system has evolved in Karachi, the data sources being the hospitals within the Karachi Division. The reported/retrieved cancer data sets at the Karachi Cancer Registry are checked, coded, computerised in an analytical format and analysed. Results: The incident cancer cases registered in Karachi, during the 2-year period, 1st January 1998 to 31st December 1999 were analysed. The age-standardised incidence rate (ASR) of cancer, all sites was 132.4/100,000 for the males. Cancer of the lung 10.8%; ASR 17.3 was the most frequently recorded malignancy, followed by oral cavity 10.5%; ASR 13.2 and larynx 5.0%; ASR 7.4. The age-standardised incidence rate (ASR) of cancer, all sites was 133.0/100,000 in the females. Cancer of the breast, 32.0%; ASR 40.7 was the most frequently recorded malignancy, followed by oral cavity 8.1%; ASR 11.7 and gall bladder 3.6%; ASR 5.5. Conclusion: The present data has been calculated with an estimated 15-20% probable under ascertainment. Tobacco-associated cancers in Karachi were responsible for 38.3% of the tumours diagnosed amongst the males. Two principal cancers, breast and oral cavity were responsible for 40.1% of the cancers in females. A rare finding was the high incidence of gall bladder cancer in the females. At present it is difficult to determine whether this indicates a genuine high risk or a selection bias. A continuous process of cancer registration to study the trends in the incidence and an adequate cancer control program are possible and essential for Pakistan and can be based on the pattern being practiced in Karachi

Cancer Patterns in Quetta (1998-1999)

Introduction: Quetta, the capital of Baluchistan, is located at latitude 30,25; longitude 67.00. It has a population of 759,245; 425,474 males (56%) and 333,771 females (44%); Census 1998. The majority of residents are Persian or Baluchi speaking Baluchs. Methodology: The cancer cases from Quetta reported to the Karachi Cancer Registry were reviewed. The data included cases from the Aga Khan University Hospital (AKUH), Pathology Department (Quetta collection point) and health care facilities in Karachi. The residents of Baluchistan were ascertained and cancer cases residents of Quetta identified with the help of recorded addresses and retraceable telephone numbers. Results: During a 2-year period, 1st January 1998 to 31st December 1999 the Karachi Cancer Registry received 1077 cancer notifications from Quetta. Approximately half the cases were registered from the AKUH Quetta collection point. Others were the referral patterns in Karachi. The age-standardized incidence rate (ASR) of cancer, all sites (1998-99) was 137.0 for males and 92.8/100,000 for females. The commonest cancer in the males and females was cancer of the esophagus (lCD­10 categories C15; males- ASR 25.5, 17.2 %; females- ASR 23.4, 23.1%). One of the highest in the world, for both genders. Incidence of cancer breast in the females (lCD-10 categories C50; ASR 11.8, 13.3%) was low, Conclusion: The cancer data from Quetta is quite distinct from the cancer pattern of Karachi. It represents only a part of the cancer burden of Quetta; nonetheless it gives a glimpse into the cancer profile of Baluchistan. The high incidence of esophageal cancer indicates an extension of the geographical limits of the esophageal cancer belt

Interactions of IGF-II and Cathepsin D in MCF-7 Breast Cancer Cells

A primary role of the IGF-II/M6P receptor is to target lysosomal enzymes from the golgi to the lysosomes. This receptor has distinct binding sites for IGF-II and M6P, however, reciprocal interactions between these ligands have been observed (Kiess et al. 1989, 1990). Since IGF-II modulates the routing of cathepsin D in MCF-7 cells by blocking the intracellular binding of cathepsin D to the IGF-II/M6P receptor (De León et al. 1996), we hypothesized that expressing a mutant form of IGF-II that does not bind the IGF-II/M6P receptor will not interfere with lysosomal enzyme trafficking. In our present study, we report the effect in cathepsin D trafficking when Arg54 Arg55 IGF-II is expressed in MCF-7 breast cancer cells. Arg54 Arg55 IGF-II has no affinity for the IGF-II/M6P receptor but maintains a high affinity for the IGF-I and insulin receptors (Sakano et al. 1991). Western and radioimmunoassay analyses demonstrated that transfected MCF-7 cells secrete high levels of mutant IGF-II. Receptor binding assays using CM from Arg54 Arg55 IGF-II secreting cells also confirmed that indeed, the mutant IGF-II has a significant decreased binding to the IGF-II/M6P receptor. Utilizing this model and testing our hypothesis by Western blotting and metabolic labeling analyses, we demonstrated that Arg54 Arg55 IGF-II expression does not affect cathepsin D routing. This data, thus, confirms our hypothesis that IGF-II interference with cathepsin D routing is receptor mediated. Additional studies with this model also showed that morphological changes, indicative of a more aggressive and invasive phenotype, were associated with IGF-II expression. Specifically, changes in the expression of extracellular matrix (ECM) proteins such as vitronectin, Cadherin-5, and E-Cadherin were observed in cells expressing IGF-II. In particular, free-floating Arg54 Arg55 IGF-II cells displayed a significant reduction in an unknown 140 kD complex observed in adhering Arg54 Arg55 IGF-II cells. Thus, changes in IGF-II alter extracellular matrix proteins and facilitate the expression of a phenotype characteristic of more aggressive cancer cells. In summary, our studies demonstrate that lysosomal enzyme trafficking of cathepsin D is not affected when Arg54 Arg55 IGF-II is overexpressed, thus, providing direct evidence that the IGF-II effect is receptor mediated. The morphological changes observed in the transfected cells provide further evidence of the importance of IGF-II interactions with the IGF-II/M6P receptor in breast cancer

Genetic diversity study of indigenous cattle (Gir and Kankrej) population of Rajasthan using microsatellite markers

The genetic diversity study of native Gir and Kankrej (Bos indicus) cattle populations were evaluated using nine microsatellite markers (ETH-225, CSRM-60, HEL-9, INRA-005, ETH-10, HAUT-24, BM1818, ILSTS-002 and ILSTS-006) suggested by FAO (ISAG). A total of 60 cattle were sampled from different places of local Rajasthan region. For each, 30 individuals were sampled. The mean number of observed and effective alleles in Kankrej were high (5.222 and 3.714) comparatively and the average expected heterozygosity values (0.5403) indicated high diversity in the Kankrej population than Gir (0.4520). High polymorphism information content (PIC) values observed for most of the markers with an average of 0.5116 are indicative of high polymorphism of these markers in Kankrej breed than in Gir (0.4202), which showed high informativeness of all the microsatellite markers in Kankrej breed. Three microsatellites markers (HAUT24, BM1818 AND ILSTS006) did not show amplification in both breeds. INRA005 was the only markers amplified in Kankrej. The allele diversity (mean observed number of alleles was 6.11; mean effective number of alleles was 5.187) and gene diversity (0.2771) values implied a substantial amount of genetic variability in both populations. Reasonably high PIC values observed for most of the markers, with an average PIC value of 0.5116 across all the loci implied that this set of microsatellite are very informative for evaluation of genetic diversity in both the breeds. This informativeness of microsatellite markers showed it can be used for various applications like, conservation, disease diagnosis and polymorphism in different populations.Key words: Genetic diversity, polymorphism information content (PIC), heterozygosity, polymorphism, marker

Inclusion Ideals Associated to Uniformly Increasing Hypergraphs

In this paper,we introduce the monomial ideals I(H) associated to a special class of non uniform hypergraphs H(X; E; d) namely uniformly increasing hypergraphs. These ideals are named as inclusion ideals. In this paper, we discuss some algebraic properties of these inclusion ideals. In particular, we give an upper bound of the Castlenouvo-Mumford regularity of the special dual ideal I^[*](H) of the inclusion ideal.Comment: 6 pages, 1 figur